DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG11155 and GluRIIB

DIOPT Version :9

Sequence 1:NP_651941.2 Gene:CG11155 / 43822 FlyBaseID:FBgn0039927 Length:910 Species:Drosophila melanogaster
Sequence 2:NP_523485.3 Gene:GluRIIB / 33789 FlyBaseID:FBgn0020429 Length:913 Species:Drosophila melanogaster


Alignment Length:941 Identity:267/941 - (28%)
Similarity:432/941 - (45%) Gaps:123/941 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 IILSILVISNALPP--VIRVGAIFTEDERESSIESAFKYAIYRINKEKTLLPNTQLVYDIEYVPR 90
            ::|::.:.|.|...  ||::||||.:.|.:  :..||..|:..:|   .:.|..:|.....||..
  Fly     8 VLLALAIASGANEDTLVIKIGAIFFDTEMK--LADAFSAALEEVN---AINPALKLDAIKRYVTV 67

  Fly    91 DDSFRTTKKVCSQLEAGVQAIFGPTDALLASHVQSICEAYDIPHIE-----GRIDLEYNSKEFSI 150
            |||.......|..:.:||.|||||:....:..|:.:|....|||::     .:.:.|..:.:.::
  Fly    68 DDSIVLQDISCDLIGSGVAAIFGPSSKTNSDIVEVLCNMTGIPHLQFDWHPQQSNRERMNHQLTV 132

  Fly   151 NLYPSHTLLTLAYRDIMV--YLNWTKVAIIYEEDYGLFNLMH-------SSTETKAEMYIRQASP 206
            |:.|....|:.|:.||:.  ..:|....|.||....|..|.|       .....|.:.:.|   .
  Fly   133 NVAPMELFLSAAFSDILASKTFDWKSFTIAYERSSHLIRLQHILAWKQLHKAGIKMQEFER---G 194

  Fly   207 DSYRQVLRAIRQKEIYKIIVDTNPSHIKSFFRSILQLQMNDHRYHYMFTTFDLETYDLEDF--RY 269
            |.||.:.:.|.......:::|.....:.....:.:...|.....|...|..|.....::.|  |.
  Fly   195 DDYRILWKRINNAREKFVLLDCPSDILVDVINASIGYNMTGSFNHLFLTNLDTHLSGIDGFYSRD 259

  Fly   270 NSVNITAFRLVDVDSKRYLEVINQMQKLQHNGLDTINGSPYIQTE-----SALMFDSVYAFANGL 329
            .:|.:.|.|:     :.|      :....|:.:|..:.|  :.|.     |.|::||:..|.|.|
  Fly   260 FTVAVAAVRI-----RTY------VPPPVHDEIDVFDNS--VDTRFSSLGSQLVYDSIVLFYNAL 311

  Fly   330 HFLNLDNHQNFYIKNLSCTSDQTWNDGISLYNQINAAITDGL------TGTVQF-VEGRRNIFKL 387
              |.:.....|||.|.|| ....|..|..|..|:. .||..:      |..:|. .:|:|..|.|
  Fly   312 --LEISQRPGFYIPNFSC-GRGFWQPGPRLVEQMK-QITPKMVKPPFKTQRLQINADGQREDFNL 372

  Fly   388 DILKLKQEKIQKVGYWHPD------DGVNISDPTAFYDSNIAN--------ITLVVMTREERPYV 438
            ::.....:::..:  |:.:      :.:..:...|.....:.|        |...|.||..:||.
  Fly   373 EVYNPIIDRVTHI--WNKEFQLVDFEKLRENSTQALKQKRLQNKEDFSQKPIRYTVATRVGKPYF 435

  Fly   439 MVKEDK---NLTGNLRFEGFCIDLLKAIATQVGFQYKIELVPDNMYGVYIPETNSWNGIVQELME 500
            ..:|:.   :..||.||||:.:||:..:|.:..|.:..|.|.||.||.|...|:.|:||:::|::
  Fly   436 SWREEPEGVHYEGNERFEGYAVDLIYMLAQECKFDFNFEPVRDNKYGSYDANTDEWDGIIRQLID 500

  Fly   501 RRADLAVASMTINYARESVIDFTKPFMNLGIGIL-FKVPTSQPTRLFSFMNPLAIEIWLYVLAAY 564
            ..|.:.:..:||..||.||:|||.|||.|||.|| :|.|..: ..:::|:||...|:||:|:.|.
  Fly   501 NNAQIGICDLTITQARRSVVDFTVPFMQLGISILSYKEPPPK-ADIYAFLNPYNAEVWLFVMIAM 564

  Fly   565 ILVSFALFVMARFSPYEWKNPHPCYKETDIVENQFSISNSFWFITGTFLRQGSGLNPKATSTRIV 629
            ::.:|||....|...|||..|..........:|.:.:||:.|.:.|:.|.||..|.|:....|::
  Fly   565 MITAFALIFTGRIDQYEWDQPVENVNREMERQNIWHLSNALWLVLGSMLNQGCDLLPRGLPMRLL 629

  Fly   630 GGCWFFFCLIIISSYTANLAAFLTVERMISPIESASDLAEQTEISYGTLEGGSTMTFFRDSKIGI 694
            ...|:.|.|:|..:|.|.||||:|..::...|.|..||.:|.::.:||:.||:|..:|.:|....
  Fly   630 TAFWWIFALLISQTYIAKLAAFITSSKIAGDIGSLHDLVDQNKVQFGTIRGGATSVYFSESNDTD 694

  Fly   695 YQKMWRYMENRKTAVFVKTYEDGIKRV--MEGSYAFLMESTMLDYAVQRDCNLTQIGGLLDSKGY 757
            .:..|..|.:.|...|.|..|:|:.||  .:|:||||||:|.|.|.|||:|.|||||.....|.|
  Fly   695 NRMAWNKMLSFKPDAFTKNNEEGVDRVKLSKGTYAFLMETTNLQYYVQRNCELTQIGESFGEKHY 759

  Fly   758 GIATPKGSPWRDKISLAILELQEKGIIQILYDKWWKNTGDVCNR-----DDKSKESKANALGVEN 817
            |||.|..:.:|..:|:.||.|.|:|.:..|.:||:.:....|:.     ||       ....:::
  Fly   760 GIAVPLNADFRSNLSVGILRLSERGELFKLRNKWFNSNESTCDSNVPTIDD-------GQFDMDS 817

  Fly   818 IGGVFVVLLCGLALAVVVAIFEFCWN----------------------------SRKNLNTENQS 854
            :||:||||:.|:.:.:|:.:.||.|:                            :||.|:|..||
  Fly   818 VGGLFVVLIVGVVVGLVIGVAEFLWHVQRISVKEKIPPMLALKAEFYFVIRFWLTRKPLHTYRQS 882

  Fly   855 LCS-----EMAEELRFAMHCHGSKSRHRPRK 880
            ..|     ...|::..|......|...|..|
  Fly   883 RDSTSTGYSSLEQITSASSAKKKKKTRRIEK 913

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11155NP_651941.2 PBP1_iGluR_Kainate 44..410 CDD:107377 91/399 (23%)
ANF_receptor 61..393 CDD:279440 85/359 (24%)
PBP2_iGluR_Kainate 424..793 CDD:270432 144/382 (38%)
Lig_chan 555..829 CDD:278489 100/280 (36%)
GluRIIBNP_523485.3 PBP1_iGluR_Kainate 26..393 CDD:107377 91/393 (23%)
ANF_receptor 41..378 CDD:279440 85/359 (24%)
PBP2_iGluR_Kainate 422..795 CDD:270432 143/373 (38%)
Lig_chan 555..822 CDD:278489 96/273 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45462686
Domainoid 1 1.000 82 0.746 Domainoid score I2907
eggNOG 1 0.900 - - E1_KOG1052
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D60688at33208
OrthoFinder 1 1.000 - - FOG0000021
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR18966
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
76.850

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