DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG11155 and Ir7b

DIOPT Version :10

Sequence 1:NP_651941.2 Gene:CG11155 / 43822 FlyBaseID:FBgn0039927 Length:910 Species:Drosophila melanogaster
Sequence 2:NP_572410.2 Gene:Ir7b / 31690 FlyBaseID:FBgn0029965 Length:655 Species:Drosophila melanogaster


Alignment Length:771 Identity:139/771 - (18%)
Similarity:247/771 - (32%) Gaps:274/771 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly   187 NLMHSSTETKAEMYIRQASPDSYRQVL---RAIRQKEIYKIIVDTNP----SHIKSFFRSILQLQ 244
            :|:.|:.|:.::..:.:|    ..||:   ...|.|.:| |...||.    .|::.....:|.:.
  Fly    12 SLVASTMESSSDWDLAEA----LAQVVANSEMGRFKTLY-IYTHTNSQSTGGHLEELLDQVLMIV 71

  Fly   245 MNDHRYHYMFTTFDLETYDLEDFRYNSVNITAFRLVDVDSKRYLEVINQMQKLQHNGLDTINGSP 309
            .|                          |:.|.||:...|..|...:       |..|..::|.|
  Fly    72 PN--------------------------NLQARRLLLQQSMEYKPYV-------HAVLALVDGLP 103

  Fly   310 YIQTESALMFDSVYAFANGLHFLNLDNHQNFYIKNLSCTSDQTWNDGISLYNQINAAITDGLTGT 374
            .:        .::||.......|   :|...|   :|..:|               |..:.:..|
  Fly   104 SL--------SAIYARIRATQDL---SHTLIY---MSMPTD---------------AYGEEMQAT 139

  Fly   375 VQFVEGRRNIFKLD-ILKLKQEKIQKVGY--------------------------WHPDDGVNIS 412
            ::|: .|.::..:. :|:...:.|..|.|                          |...|     
  Fly   140 LRFL-WRLSVLNVGVVLRPPGDHILMVSYFPFSALHGCQVISANVVNRYQVGTKRWASQD----- 198

  Fly   413 DPTAFYDSNIANI---TLVVMTREERPYVMVKEDKNLTGNLRFEGFCIDLLKAIATQVGFQYKIE 474
                ::.|.:.|.   .|...|.|:.||::.:.|    |:..|.|....||:.:|..:.|     
  Fly   199 ----YFPSKLGNFYGCLLTCATWEDMPYLVWRPD----GSGSFVGIEGALLQFMAENLNF----- 250

  Fly   475 LVPDNMYGVY------IPETNSWNG-IVQELMERRADLAVASMTINYARESVIDFTKPFMNLGIG 532
                 ..|:|      :..|...:| |..|:....||.::.                       |
  Fly   251 -----TVGLYWMNKEEVLATFDESGRIFDEIFGHHADFSLG-----------------------G 287

  Fly   533 ILFK------VPTSQPTRLF--------------------SFMNPLAIEIWLYVLAAYILVSFAL 571
            ..||      :|.||.|..|                    ||  |....:|..:....||....|
  Fly   288 FHFKPSAGSEIPYSQSTYYFMSHIMLVTNLQSAYSAYEKLSF--PFTPLLWRAIGLVLILACLLL 350

  Fly   572 FVMARFSPYEWKNPHPCYKETDIVENQFSISNSFWFITGTFLRQGSGLN----PKATSTRIVGGC 632
            .::.|     |::.|...:            |.::.:  ..|..|..|.    |:...:|:|...
  Fly   351 MLLVR-----WRHHHELPR------------NPYYEL--LVLTMGGNLEDRWVPQRFPSRLVLLT 396

  Fly   633 WFFFCLIIISSYTANLAAFLTVERMISPIESASD---------LAEQTE--------------IS 674
            |.|..|::.|.|.:.:...|..:...:|.::.|:         |||..|              :.
  Fly   397 WLFATLVLRSGYQSGMYQLLRQDTQRNPPQTISEVLAQHFTIQLAEVNEARILASLPELRPEQLV 461

  Fly   675 YGTLEGGSTMTF-------FRDSKIGIYQKMWRYMENRKTAVFVKTYEDGIKRVMEGSYAFLMES 732
            |  |||....:|       ...:::.|......:...||    |......:..|.|..|     :
  Fly   462 Y--LEGSELQSFPALAQQSGSSARVAILTPYEYFGYFRK----VHPMSRRLHLVRERIY-----T 515

  Fly   733 TMLDYAVQRDCNLTQIGGLLDSK-----GYGIATPKGSPWRDKISLAILELQEKGIIQILYDKWW 792
            ..|.:.|:|..:|.   |:|:.:     .:|..    ..|..:...|:.| :::.:.:|....: 
  Fly   516 QQLAFYVRRHSHLV---GVLNKQIQHAHTHGFL----EHWTRQYVSAVDE-KDESVARIASTSY- 571

  Fly   793 KNTGDVCNRDDKSKES---------KANALGVENIGGVFVVLLCGLALAVVVAIFE 839
             :|.|..:.|....||         :.|.|.:..:..:|.::|.....||||.:.|
  Fly   572 -STLDGIDGDPSLSESEEDQQVAPVRQNVLSMRELAALFWLILWANLGAVVVFVLE 626

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11155NP_651941.2 PBP1_iGluR_Kainate 44..413 CDD:380605 42/259 (16%)
PBP2_iGluR_Kainate 424..793 CDD:270432 82/443 (19%)
Lig_chan 554..828 CDD:459656 58/321 (18%)
Ir7bNP_572410.2 None

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