DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG11155 and GRIN2C

DIOPT Version :9

Sequence 1:NP_651941.2 Gene:CG11155 / 43822 FlyBaseID:FBgn0039927 Length:910 Species:Drosophila melanogaster
Sequence 2:XP_016880033.1 Gene:GRIN2C / 2905 HGNCID:4587 Length:1337 Species:Homo sapiens


Alignment Length:552 Identity:143/552 - (25%)
Similarity:247/552 - (44%) Gaps:117/552 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   389 ILKLKQEKI-QKVGYWHPDDGVNISDPTAF--YDSNIANIT----LVVMTREERPYVMVKEDKNL 446
            ::.|.:.:: :.||.|  :.||.......:  |.:::..:.    |.|.|.||||:|:|:.....
Human   435 VIALNRHRLWEMVGRW--EHGVLYMKYPVWPRYSASLQPVVDSRHLTVATLEERPFVIVESPDPG 497

  Fly   447 TG--------------------------NLRFEGFCIDLLKAIATQVGFQYKIELVPDNMYGVYI 485
            ||                          .|..:|||||:||.:|..|.|.|.:.||.:..:|..:
Human   498 TGGCVPNTVPCRRQSNHTFSSGDVAPYTKLCCKGFCIDILKKLARVVKFSYDLYLVTNGKHGKRV 562

  Fly   486 PETNSWNGIVQELMERRADLAVASMTINYARESVIDFTKPFMNLGIGILF--KVPTSQPTRLFSF 548
              ...|||::.|:..:|||:|:.|:|||..|..::||:.||:..||.::.  ...|..|:   :|
Human   563 --RGVWNGMIGEVYYKRADMAIGSLTINEERSEIVDFSVPFVETGISVMVARSNGTVSPS---AF 622

  Fly   549 MNPLAIEIWLYVLAAYI-LVSFALFVMARFSPYEW--------KNPHPCYKETDIVENQFSISNS 604
            :.|.:..:|:.:....: :|:..:|:...|||..:        |:..|.          |:|..|
Human   623 LEPYSPAVWVMMFVMCLTVVAITVFMFEYFSPVSYNQNLTRGKKSGGPA----------FTIGKS 677

  Fly   605 FWFITGTFLRQGSGL-NPKATSTRIVGGCWFFFCLIIISSYTANLAAFLTVERMISPIESASDL- 667
            .|.:..........: ||:.|:::|:...|.||.:|.::|||||||||:..|:.|..:...||. 
Human   678 VWLLWALVFNNSVPIENPRGTTSKIMVLVWAFFAVIFLASYTANLAAFMIQEQYIDTVSGLSDKK 742

  Fly   668 ---AEQTEIS-----------------------YGTLEGGSTMTFFRDSKIGIYQKMWRYMENRK 706
               .|.|.::                       :||:..|||....|.:...::..|.::.:   
Human   743 SLHLENTGVAWTAFKTFCSDYFQRPQDQYPPFRFGTVPNGSTERNIRSNYRDMHTHMVKFNQ--- 804

  Fly   707 TAVFVKTYEDGIKRVMEGSY---------AFLMESTMLDYAVQRD--CNLTQIGG--LLDSKGYG 758
                 ::.||.:..:..||.         ||:.::.:|:|...:|  |.|..||.  :..:.|||
Human   805 -----RSVEDALTSLKMGSEAQPVPRKLDAFIYDAAVLNYMAGKDEGCKLVTIGSGKVFATTGYG 864

  Fly   759 IATPKGSPWRDKISLAILELQEKGIIQILYDKWWKNTGDVCNRDDKSKESKANALGVENIGGVFV 823
            ||..|.|.|:..|.||:|:....|..|.|...|   ...:|  .::..|..::.|.::|:.|||.
Human   865 IAMQKDSHWKRAIDLALLQFLGDGETQKLETVW---LSGIC--QNEKNEVMSSKLDIDNMAGVFY 924

  Fly   824 VLLCGLALAVVVAIFEFC--WNSRKNLNTENQ 853
            :||..:.||::|..:|..  |..|.::...:|
Human   925 MLLVAMGLALLVFAWEHLVYWKLRHSVPNSSQ 956

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11155NP_651941.2 PBP1_iGluR_Kainate 44..410 CDD:107377 5/21 (24%)
ANF_receptor 61..393 CDD:279440 0/3 (0%)
PBP2_iGluR_Kainate 424..793 CDD:270432 120/450 (27%)
Lig_chan 555..829 CDD:278489 80/323 (25%)
GRIN2CXP_016880033.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165156269
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1052
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
32.740

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