DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG11155 and GRIK4

DIOPT Version :10

Sequence 1:NP_651941.2 Gene:CG11155 / 43822 FlyBaseID:FBgn0039927 Length:910 Species:Drosophila melanogaster
Sequence 2:NP_055434.2 Gene:GRIK4 / 2900 HGNCID:4582 Length:956 Species:Homo sapiens


Alignment Length:895 Identity:358/895 - (40%)
Similarity:525/895 - (58%) Gaps:60/895 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 SYLKKICCSYIILSILVISNALPPVIRVGAIFTEDERESS--IESAFKYAIYRINKEKTLLPNTQ 80
            ::|..:.||             |..:|:.||. :|..|.|  ...:...|..|||:....|...:
Human    13 AWLVMVACS-------------PHSLRIAAIL-DDPMECSRGERLSITLAKNRINRAPERLGKAK 63

  Fly    81 LVYDIEYVPRDDSFRTTKKVCSQLEAGVQAIFGPTDALLASH-VQSICEAYDIPHIEGRID--LE 142
            :..||..:.||..:.|.:.:|..|..||.|:.||:.:..:|. :.:||...::||.:...:  ::
Human    64 VEVDIFELLRDSEYETAETMCQILPKGVVAVLGPSSSPASSSIISNICGEKEVPHFKVAPEEFVK 128

  Fly   143 YNSKEF-SINLYPSHTLLTLAYRDIMVYLNWTKVAIIYEEDYGLFN---LMHSSTETKAEMYIRQ 203
            :..:.| ::||:||:|.:::|...|:.:.|.|...:|..:...|.|   |:.....:|..:.:|.
Human   129 FQFQRFTTLNLHPSNTDISVAVAGILNFFNCTTACLICAKAECLLNLEKLLRQFLISKDTLSVRM 193

  Fly   204 ASPDSYRQ---VLRAIRQKEIYKIIVDTNPSHIKSFFRSILQLQMNDHRYHYMFTTFDLETYDLE 265
            .  |..|.   :|:.||..:...||:..|.|...:......:|.|....|.|:||..:.....::
Human   194 L--DDTRDPTPLLKEIRDDKTATIIIHANASMSHTILLKAAELGMVSAYYTYIFTNLEFSLQRMD 256

  Fly   266 DFRYNSVNITAFRLVDVDSKRYLEVINQMQKLQHNGLDTINGSPYI--QTESALMFDSVYAFANG 328
            ....:.|||..|.:.:.....:.|....:.:......|.:   |:.  ...|||:||:|||....
Human   257 SLVDDRVNILGFSIFNQSHAFFQEFAQSLNQSWQENCDHV---PFTGPALSSALLFDAVYAVVTA 318

  Fly   329 LHFLNLDNHQNFYIKNLSCTSDQTWNDGISLYNQINAAITDGLTGTVQF-VEGRRNIFKLDILKL 392
            :..||  ..|...:|.|||.|.|.|..|.||.|.:.....:||||.::| .:|:|:.:.|.||:.
Human   319 VQELN--RSQEIGVKPLSCGSAQIWQHGTSLMNYLRMVELEGLTGHIEFNSKGQRSNYALKILQF 381

  Fly   393 KQEKIQKVGYWHPDDGVNISDPTAFYDSNIA----NITLVVMTREERPYVMVK-EDKNLTGNLRF 452
            .:...:::|.||..:|:::.  :..|.|||:    |.||||.|..|.||:|:| ..:.:.||.|:
Human   382 TRNGFRQIGQWHVAEGLSMD--SHLYASNISDTLFNTTLVVTTILENPYLMLKGNHQEMEGNDRY 444

  Fly   453 EGFCIDLLKAIATQVGFQYKIELVPDNMYGVYIPETN-SWNGIVQELMERRADLAVASMTINYAR 516
            ||||:|:||.:|..:.|.|||.||.|.:|||  ||.| :|.|:|.||:.|:||||||.:||...|
Human   445 EGFCVDMLKELAEILRFNYKIRLVGDGVYGV--PEANGTWTGMVGELIARKADLAVAGLTITAER 507

  Fly   517 ESVIDFTKPFMNLGIGILFKVPTSQPTRLFSFMNPLAIEIWLYVLAAYILVSFALFVMARFSPYE 581
            |.||||:||||.|||.||::|...:....|||::|.:..:||::|.||:.||..||::||.:|||
Human   508 EKVIDFSKPFMTLGISILYRVHMGRKPGYFSFLDPFSPGVWLFMLLAYLAVSCVLFLVARLTPYE 572

  Fly   582 WKNPHPCYK-ETDIVENQFSISNSFWFITGTFLRQGSGLNPKATSTRIVGGCWFFFCLIIISSYT 645
            |.:||||.: ..:::.||:|:.||.||..|.|::|||.:.|:|.|||.|.|.|:.|.||||||||
Human   573 WYSPHPCAQGRCNLLVNQYSLGNSLWFPVGGFMQQGSTIAPRALSTRCVSGVWWAFTLIIISSYT 637

  Fly   646 ANLAAFLTVERMISPIESASDLAEQTEISYGTLEGGSTMTFFRDSKIGIYQKMWRYMENRKTAVF 710
            |||||||||:||..||||..|||:||.|.|||:.|||:||||::|:...||:||.||.:::.:||
Human   638 ANLAAFLTVQRMDVPIESVDDLADQTAIEYGTIHGGSSMTFFQNSRYQTYQRMWNYMYSKQPSVF 702

  Fly   711 VKTYEDGIKRVMEGSYAFLMESTMLDYAVQRDCNLTQIGGLLDSKGYGIATPKGSPWRDKISLAI 775
            ||:.|:||.||:..:||||:||||.:|..||:|||||||||||:|||||..|.||.:||:..|||
Human   703 VKSTEEGIARVLNSNYAFLLESTMNEYYRQRNCNLTQIGGLLDTKGYGIGMPVGSVFRDEFDLAI 767

  Fly   776 LELQEKGIIQILYDKWWKNTGDVCNRDDKSKESKANALGVENIGGVFVVLLCGLALAVVVAIFEF 840
            |:|||...::||..|||:  |..|   .|.::.:|..||:|||||:||||:|||.:|:.:|:.||
Human   768 LQLQENNRLEILKRKWWE--GGKC---PKEEDHRAKGLGMENIGGIFVVLICGLIVAIFMAMLEF 827

  Fly   841 CWNSRKNLNTENQSLCSEMAEELRFAMHCHGSKSRHRPRKRSCLNCSSVP 890
            .|..|.:..|| .|:|.||..|||..:.|..|   ..||:|.    ::||
Human   828 LWTLRHSEATE-VSVCQEMVTELRSIILCQDS---IHPRRRR----AAVP 869

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11155NP_651941.2 PBP1_iGluR_Kainate 44..413 CDD:380605 102/383 (27%)
PBP2_iGluR_Kainate 424..793 CDD:270432 207/371 (56%)
Lig_chan 554..828 CDD:459656 154/274 (56%)
GRIK4NP_055434.2 PBP1_iGluR_Kainate_KA1_2 24..402 CDD:380616 102/387 (26%)
PBP2_iGluR_kainate_KA1 415..785 CDD:270442 207/371 (56%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 863..889 3/11 (27%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 931..956
Blue background indicates that the domain is not in the aligned region.

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