DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG11155 and GRIK3

DIOPT Version :10

Sequence 1:NP_651941.2 Gene:CG11155 / 43822 FlyBaseID:FBgn0039927 Length:910 Species:Drosophila melanogaster
Sequence 2:NP_000822.2 Gene:GRIK3 / 2899 HGNCID:4581 Length:919 Species:Homo sapiens


Alignment Length:910 Identity:394/910 - (43%)
Similarity:573/910 - (62%) Gaps:62/910 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 ICCSYIILSILVISNALPPVIRVGAIFT-EDERESSI----ESAFKYAIYRINKEKTLLPNTQLV 82
            :.|::.|..    |..:|.|||:|.||. .|...:.:    |.||:::...||:.:||||||.|.
Human    20 LVCAFWIPD----SRGMPHVIRIGGIFEYADGPNAQVMNAEEHAFRFSANIINRNRTLLPNTTLT 80

  Fly    83 YDIEYVPRDDSFRTTKKVCSQLEAGVQAIFGPTDALLASHVQSICEAYDIPHIEGR-----IDLE 142
            |||:.:...|||..|||.|.||..||.|||||:.....:.|||||.|.::|||:.|     :|  
Human    81 YDIQRIHFHDSFEATKKACDQLALGVVAIFGPSQGSCTNAVQSICNALEVPHIQLRWKHHPLD-- 143

  Fly   143 YNSKEFSINLYPSHTLLTLAYRDIMVYLNWTKVAIIYEEDYGLFNLMH---SSTETKAEMYIRQA 204
             |...|.:||||.:..|:.|..|::.||.|....::|::..||..|..   :.:.....:.|||.
Human   144 -NKDTFYVNLYPDYASLSHAILDLVQYLKWRSATVVYDDSTGLIRLQELIMAPSRYNIRLKIRQL 207

  Fly   205 SPDS--YRQVLRAIRQKEIYKIIVDTNPSHIKSFFRSILQLQMNDHRYHYMFTTFDLETYDLEDF 267
            ..||  .|.:|:.:::...::||.|.:.:......:..:.:.|....||::|||.||...|||.:
Human   208 PIDSDDSRPLLKEMKRGREFRIIFDCSHTMAAQILKQAMAMGMMTEYYHFIFTTLDLYALDLEPY 272

  Fly   268 RYNSVNITAFRLVDVDSKRYLEVINQ--MQKLQ-----HNGLDTINGSPYIQTESALMFDSVYAF 325
            ||:.||:|.||:::||:.....::.:  |::||     .:||  ::|  .:.|::||::|:|   
Human   273 RYSGVNLTGFRILNVDNPHVSAIVEKWSMERLQAAPRSESGL--LDG--VMMTDAALLYDAV--- 330

  Fly   326 ANGLHFLNL--DNHQNFYIKNLSCTSDQTWNDGISLYNQINAAITDGLTGTVQF--VEGRRNIFK 386
                |.:::  .......:.:|.|...:.|..|....|.|..|..:||||.:.|  ..|.|..|.
Human   331 ----HIVSVCYQRAPQMTVNSLQCHRHKAWRFGGRFMNFIKEAQWEGLTGRIVFNKTSGLRTDFD 391

  Fly   387 LDILKLKQEKIQKVGYWHPDDGVNISDPTAFYDSNI----ANITLVVMTREERPYVMV-KEDKNL 446
            |||:.||::.::|||.|.|.||:||::.......|:    .|.:|:|.|..|.|:||. |.|:.|
Human   392 LDIISLKEDGLEKVGVWSPADGLNITEVAKGRGPNVTDSLTNRSLIVTTVLEEPFVMFRKSDRTL 456

  Fly   447 TGNLRFEGFCIDLLKAIATQVGFQYKIELVPDNMYGVYIPETNSWNGIVQELMERRADLAVASMT 511
            .||.||||:||||||.:|..:||.|:|.||.|..||.. .:...|||:|:||::.:||||||.:|
Human   457 YGNDRFEGYCIDLLKELAHILGFSYEIRLVEDGKYGAQ-DDKGQWNGMVKELIDHKADLAVAPLT 520

  Fly   512 INYARESVIDFTKPFMNLGIGILFKVPTSQPTRLFSFMNPLAIEIWLYVLAAYILVSFALFVMAR 576
            |.:.||..|||:||||.||:.||::.|......:|||:|||:.:||:|||.||:.||..|||:||
Human   521 ITHVREKAIDFSKPFMTLGVSILYRKPNGTNPSVFSFLNPLSPDIWMYVLLAYLGVSCVLFVIAR 585

  Fly   577 FSPYEWKNPHPCYKETDIVENQFSISNSFWFITGTFLRQGSGLNPKATSTRIVGGCWFFFCLIII 641
            ||||||.:.|||...:::|||.|::.|||||..|:.::|||.|.|||.||||:||.|:||.||||
Human   586 FSPYEWYDAHPCNPGSEVVENNFTLLNSFWFGMGSLMQQGSELMPKALSTRIIGGIWWFFTLIII 650

  Fly   642 SSYTANLAAFLTVERMISPIESASDLAEQTEISYGTLEGGSTMTFFRDSKIGIYQKMWRYMENRK 706
            ||||||||||||||||.|||:||.|||:||:|.||.::.|:|||||:.|||..::|||.:|.::.
Human   651 SSYTANLAAFLTVERMESPIDSADDLAKQTKIEYGAVKDGATMTFFKKSKISTFEKMWAFMSSKP 715

  Fly   707 TAVFVKTYEDGIKRVMEGSYAFLMESTMLDYAVQRDCNLTQIGGLLDSKGYGIATPKGSPWRDKI 771
            :|: ||..|:||:|.:...||.|||||.::|..||:|||||||||:|||||||.||.|||:||||
Human   716 SAL-VKNNEEGIQRALTADYALLMESTTIEYVTQRNCNLTQIGGLIDSKGYGIGTPMGSPYRDKI 779

  Fly   772 SLAILELQEKGIIQILYDKWWKNTGDVCNRDDKSKESKANALGVENIGGVFVVLLCGLALAVVVA 836
            ::|||:|||:..:.|:.:|||:.:|  | .::::||  |:|||::.|||:|:||..||.|:|:||
Human   780 TIAILQLQEEDKLHIMKEKWWRGSG--C-PEEENKE--ASALGIQKIGGIFIVLAAGLVLSVLVA 839

  Fly   837 IFEFCWNSRKNLNTENQSLCSEMAEELRFAMHCHGSKSRHRPRKRSCLNCSSVPTYVPSNVSTSN 901
            :.||.:..||....|.:|.||.:|:|:||::.|. .:.:|:|:....:...:|     .|:.|.|
Human   840 VGEFVYKLRKTAEREQRSFCSTVADEIRFSLTCQ-RRVKHKPQPPMMVKTDAV-----INMHTFN 898

  Fly   902  901
            Human   899  898

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11155NP_651941.2 PBP1_iGluR_Kainate 44..413 CDD:380605 134/394 (34%)
PBP2_iGluR_Kainate 424..793 CDD:270432 213/369 (58%)
Lig_chan 554..828 CDD:459656 161/273 (59%)
GRIK3NP_000822.2 PBP1_iGluR_Kainate 37..417 CDD:380605 133/393 (34%)
PBP2_iGluR_Kainate_GluR7 433..801 CDD:270441 213/369 (58%)

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