DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG11155 and ZK867.2

DIOPT Version :9

Sequence 1:NP_651941.2 Gene:CG11155 / 43822 FlyBaseID:FBgn0039927 Length:910 Species:Drosophila melanogaster
Sequence 2:NP_001355384.1 Gene:ZK867.2 / 191445 WormBaseID:WBGene00022829 Length:354 Species:Caenorhabditis elegans


Alignment Length:171 Identity:40/171 - (23%)
Similarity:68/171 - (39%) Gaps:47/171 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   449 NLRFEGFCIDLLKAIATQVGFQYKIELVPDNMYGVY-----------IPETNSWNGIVQELMERR 502
            |.:..|..:::||.|...:|..|       .|..|:           ..:..:|:|::..|...:
 Worm    23 NCKHPGAEVEILKMIFRLIGVNY-------TMIDVWKKFGQQYDFGSKQKNGNWSGMIGLLQSDQ 80

  Fly   503 ADLAVASMTINYARESVIDFTKPFMNLGIGILFKVPTSQPTRLF-----SFMNPLAIE-IWLYVL 561
            .|:...||.|...||.|:.|                 |.|||:|     ||  |::.. :.|.:|
 Worm    81 LDMIGLSMRIAPEREEVVLF-----------------SYPTRVFETSIQSF--PVSSRMLLLIIL 126

  Fly   562 AAYILVS--FALFVMARFS-PYEWKNPHPCYKET-DIVENQ 598
            .|...:|  :...::|..| |..:..|....|:. ::||:|
 Worm   127 IATFFISQLYQTDMLAFLSVPLTYSIPFRSIKQALELVEHQ 167

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11155NP_651941.2 PBP1_iGluR_Kainate 44..410 CDD:107377
ANF_receptor 61..393 CDD:279440
PBP2_iGluR_Kainate 424..793 CDD:270432 40/171 (23%)
Lig_chan 555..829 CDD:278489 12/49 (24%)
ZK867.2NP_001355384.1 Lig_chan-Glu_bd 22..77 CDD:214911 11/60 (18%)
Periplasmic_Binding_Protein_Type_2 <69..>103 CDD:389745 12/50 (24%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1052
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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