DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG11155 and W02A2.5

DIOPT Version :9

Sequence 1:NP_651941.2 Gene:CG11155 / 43822 FlyBaseID:FBgn0039927 Length:910 Species:Drosophila melanogaster
Sequence 2:NP_502564.2 Gene:W02A2.5 / 189098 WormBaseID:WBGene00012190 Length:487 Species:Caenorhabditis elegans


Alignment Length:463 Identity:89/463 - (19%)
Similarity:168/463 - (36%) Gaps:135/463 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   452 FEGFCIDLLKAIATQVGFQYKIELVPDNMYGV---YIPETNSWNGIVQELMERRADLAVASMTIN 513
            |.|:.:::||.|...:.::....:.|..:.|:   .:.:..:|:|::..|....|| |||.|   
 Worm    36 FPGWTMEVLKMITDSLKWEIIPVVTPTIVGGLDWGTLQKNGTWSGVLGYLQNGTAD-AVALM--- 96

  Fly   514 Y----ARESVIDFTKPFMNL-GIGILFKVPTSQPTRLFSFMNPLAIEIWLYVLAAYIL------- 566
            |    .|....:::.|..|: .:.:..|...:..:.|::...|.::|:||.:||:.:|       
 Worm    97 YQKTDTRNEYFEYSYPVTNVQPVFVARKKTETLGSVLWNAFKPFSVEVWLCLLASLVLNLLIMIA 161

  Fly   567 ---VSFALFVMARFSPYE--WKNPHPCYKETDIVENQFSISNSFWFITGTFLRQGSGLNPKATST 626
               :.|.|...:||.|:|  |   |....:.|    :.|....|:.::|..:             
 Worm   162 ISGIEFKLLFRSRFRPWEMLW---HVVQLQLD----EKSDDMLFYTLSGNIV------------- 206

  Fly   627 RIVGGCWFFFCL----IIISSYTANLAAFLTVERMISPIESASDLAEQTEISYGTLEGGSTMTFF 687
                  .|.|.|    |:|..|...|...|......:|..:|.::                :...
 Worm   207 ------LFVFALLQSGILIEVYKGMLLTALITSNGDNPFANADEM----------------IKLI 249

  Fly   688 RDSKIGIYQKMWRYMENRKTAVFVKTYEDGIKRVMEGSYAFLMEST----------------MLD 736
            .:.|   |.....||.|        .|.|.::...:..:..|..:|                ::|
 Worm   250 GEKK---YHLTTNYMGN--------WYFDDLQHSDQQHFVSLRAATASNPVIPAASVSAALDLVD 303

  Fly   737 -----YAVQRD----------CNLTQIG-GLLDSKGYGIATPKGSPWRDKISLAILE-----LQE 780
                 |.:|:|          ||...:. |:.....:.:.|...|        .|.|     :..
 Worm   304 SGKYIYPIQQDSLAMQMSKERCNYVYVSDGMPQVSSFFVFTKNFS--------GIAEFNTQIIMN 360

  Fly   781 KGIIQILYDKWWKNTG------DVCNRDDKSKESKANALGVENIGGVFVVLLCGLALAVVVAIFE 839
            :..||..::|:: |.|      ..|...:.:.......|.:|::.|||.:...|:|.:::|.:||
 Worm   361 QAFIQRTFNKYF-NEGFKLGFIPKCEVTEPTASDATKPLDIESVIGVFTIGALGVAASLMVFVFE 424

  Fly   840 F--CWNSR 845
            .  .|:.|
 Worm   425 IYHYWHVR 432

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11155NP_651941.2 PBP1_iGluR_Kainate 44..410 CDD:107377
ANF_receptor 61..393 CDD:279440
PBP2_iGluR_Kainate 424..793 CDD:270432 74/401 (18%)
Lig_chan 555..829 CDD:278489 59/332 (18%)
W02A2.5NP_502564.2 Lig_chan-Glu_bd <36..86 CDD:214911 9/49 (18%)
Periplasmic_Binding_Protein_Type_2 <74..>124 CDD:304360 13/53 (25%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1052
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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