DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG11155 and C08B6.5

DIOPT Version :9

Sequence 1:NP_651941.2 Gene:CG11155 / 43822 FlyBaseID:FBgn0039927 Length:910 Species:Drosophila melanogaster
Sequence 2:NP_505601.1 Gene:C08B6.5 / 182390 WormBaseID:WBGene00007426 Length:423 Species:Caenorhabditis elegans


Alignment Length:406 Identity:93/406 - (22%)
Similarity:167/406 - (41%) Gaps:52/406 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly   457 IDLLKAIATQVGFQYKI-----ELVPDNMYGVYIPETNSWNGIVQELMERRADLAVASMTINYAR 516
            |:::..:...:.:|:::     |....|.:|...|:.| ::||:..|.:.:.|::..||.|..||
 Worm    13 IEIISMVMQILDWQWEVIDTEKEFNVVNDFGNPQPDGN-FSGIMGLLAQDKIDMSGLSMRITPAR 76

  Fly   517 ESVIDFTKPFMNLGIGILFKVPTSQPTRLFSFMNPLAIEIWLYVLAAYILVSFALFVMARFSPYE 581
            .....||.|........:.|.|.....|.|.|. |...::||.:||..:..|...|..|.:    
 Worm    77 MEFAHFTFPIRYFQQVYIIKRPAENDFRNFVFA-PFTTDMWLLLLATIMGASTMRFACALY---- 136

  Fly   582 WKNPHPCYKETDIVENQFSISNSFWFIT-GTFLRQGSGLNPKATSTRIVGGCWFFFCLIIISSYT 645
            |.:.         |.::|:|..|....| |..|:| ...:|.|.||.::.|......:.|...|.
 Worm   137 WDSR---------VGSKFNIYTSSVLETFGLMLKQ-RVQDPTAVSTMLLEGFLIVAMMSIAQYYQ 191

  Fly   646 ANLAAFLTVERMISPIESASDLAEQTEISYGTLEGGSTMTFFRDSKIGIYQKMWRYMENRKTA-- 708
            .::.:     |:.:|..|......|.::....|:..:.:|::.:..:....:...|...|..|  
 Worm   192 TSMNS-----RLTAPPSSRIPFLHQNQLIELLLDKETYLTYYFNLTLEGSTEKNEYNIKRALAMN 251

  Fly   709 -VFVKTYE-DGIKRVMEGSYAF-LMESTMLDYAV---QRDCNLTQI---GGLLD--SKGYGIATP 762
             :.|:..| |.||.:.:|...: ..:...|..||   .:...||.|   .|:|.  :.|:.|:..
 Worm   252 PIVVRAREADLIKEIQKGGVFYSTYDIEFLPQAVSVWDKRQGLTVIRDTSGILSYVAFGFSISNR 316

  Fly   763 KGSPWRDKISLAILELQEKGIIQILYDKWWKNTGDVCNRDDKSKESKANALGV-ENIGGVFVVLL 826
            |.....:|..|.||    .||..|.....:   |.....:|.:.:.|...|.: :::..:|.:.|
 Worm   317 KLCQMFNKALLKIL----PGIASITLGPGY---GTKKQPEDITVQVKKTRLSLKKHLEQLFYIYL 374

  Fly   827 --CGLALA--VVVAIF 838
              ||:|||  ::..:|
 Worm   375 IGCGIALAFFIIEKVF 390

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11155NP_651941.2 PBP1_iGluR_Kainate 44..410 CDD:107377
ANF_receptor 61..393 CDD:279440
PBP2_iGluR_Kainate 424..793 CDD:270432 81/354 (23%)
Lig_chan 555..829 CDD:278489 63/290 (22%)
C08B6.5NP_505601.1 Periplasmic_Binding_Protein_Type_2 13..>116 CDD:304360 25/104 (24%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1052
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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