Protein Alignment CG11155 and nmr-2

DIOPT Version :9

• Sequence 1: NP_651941.2
• Gene: CG11155 / 43822
• FlyBaseID: FBgn0039927
• Length: 910
• Species: Drosophila melanogaster
• Sequence 2: NP_001256640.1
• Gene: nmr-2 / 180002
• WormBaseID: WBGene00003775
• Length: 990
• Species: Caenorhabditis elegans
• Alignment Length: 1016
• Identity: 241/1016 - (23%)
• Similarity: 393/1016 - (38%)
• Gaps: 271/1016 - (26%)

  Fly    54 RESSIESAFKYAIYRINKEKTLLPNTQLV--YDIEYV----PRDDSFRTTKKV----CSQLEAGV 108
            |..|.:.|||..|.:||....:....:|.  |:.:.|    |....|  .|:|    |:.:.:..
 Worm    54 RSKSYDKAFKEVIRKINDATAVSSLRRLATRYNFQAVDCILPTGTFF--VKEVLDCLCNNVTSNN 116

  Fly   109 QA--IFGPTDALLASHVQSICEAYDIPHIEGRIDLEYNSKEFSINLYPSHTLLTLAYRDI-MVYL 170
            .|  ||     :.||      |.||                 |......:.|...:|..| ::..
 Worm   117 VALIIF-----VTAS------ETYD-----------------STTAAEQYFLTAASYTGIPIIAW 153

  Fly   171 NWTKVAIIYEEDYGLFNLMHSSTETKAEMYIRQASPDSY--RQVLRAIRQKEIYKIIVDTNP--- 230
            |.......:|.|.|.:.:            |:.|.|..:  |.:|..:|:....|..|.|:.
 Worm   154 NADNAGFTFENDLGPYRI------------IQMAPPIEHQARAMLALLRRYNWPKFGVVTSEMAG 206

  Fly   231 -SHIKSFFRSILQLQMNDH------RYHYMFTTFDLET-YDLEDFRYNSVNI-----------TA 276
             ....:..|..|:|..|..      .:.:|.|..|.:. ..|.|.:.|...|           |.
 Worm   207 NDRFVTAIREELELFSNKSTKFEMIHFSHMNTKNDTDVDLKLADVKKNQAKIILLYANAAQAGTI 271

  Fly   277 F---RLVDVDSKRYLEVINQMQKLQHNGLDTINGSPYIQTESALMFDSVYAFAN----------- 327
            |   ..:|:..::||.:..|..|    |..|...:|   .::.::..:.:..:|
 Worm   272 FSHAEKMDMIGEKYLWIGTQSVK----GTQTTVKAP---AQAGMLCVNFHTVSNAMFAPRDDILP 329

  Fly   328 ----------GLHFLNLDNHQNFYIK-NLSCTS---DQTWNDGISLYNQINAAITDG-------- 370
                      |...|.|..::.|.:| |:||.|   |..|::|..:|..:.||...|
 Worm   330 LIIQLAPKLFGAALLQLRPNEMFSLKSNVSCKSEDGDPYWDNGKYIYEHMKAAFVKGNPFHVDDG 394

  Fly   371 ---------LTGTVQFVEGRRNIFKLDILKL--KQEKI-QKVGYWHPDD---------GVNISDP 414
                     .||.:     |.:|.::..|:.  |.||. :|||.:..::         |...:.|
 Worm   395 HDSFFYTFEKTGRL-----RNSILQISNLRTNSKGEKTWEKVGIFTNNELKMADVQWPGEKANPP 454

  Fly   415 TAFYDSNIANITLVVMTREERPYVMVKE-----------------------------DKNLTGNL 450
            ....|    ...:.|:|..|.|::.|.:                             .||.|...
 Worm   455 QGAAD----KFHVKVVTLHEPPFIAVSDVDPDTQKCPGNQGSICDWGDVEYTDGAGVKKNRTLLK 515

  Fly   451 RFEGFCIDLLKAIATQVGFQYKIELVPDNMYGVYIPETNSWNGIVQELMERRADLAVASMTINYA 515
            ...|:|:|||..:|..:||.|.:..|.|..:|  :...|.|||::.:||..:||:.|.|:.:|..
 Worm   516 CCSGYCVDLLNKLANDIGFTYTLYKVRDEKWG--LKTENGWNGLIADLMHNKADMCVTSLKLNSE 578

  Fly   516 RESVIDFTKPFMNLGIGILFKVPTS--QPTRLFSFMNPLAIEIWLYVLAAYI-LVSFALFVMARF 577
            |...|||:.||::.||.|:.|:.:.  .||   :|:.|.....|:.:|...| :.:.::|:....
 Worm   579 RARDIDFSLPFLDTGISIIVKIRSGVLSPT---AFLEPFEYSTWVIILFVCIHVAAISIFLFEWV 640

  Fly   578 SPYEW---KNPHPCYKETDIVENQFSISNSFWFITGTFLRQGSGLN-PKATSTRIVGGCWFFFCL 638
            |||.:   |.|.|        |::||:..|:|.:..|........: ||:|.:|::...|..|.|
 Worm   641 SPYSFNMQKYPPP--------EHKFSLFRSYWLVWATLFSASVSTDVPKSTVSRLMALVWAAFGL 697

  Fly   639 IIISSYTANLAAFLTVERMISPIESASDLA------EQTEISYGTLEGGSTMTFFRDSKIGIYQK 697
            ..::.||||||||:........:....|..      ::....:||::||:|....:.:    :.|
 Worm   698 TFLAVYTANLAAFMITRVQYYDLSGIHDPMLNFPHDQKPPFRFGTVDGGNTHETMKRN----WHK 758

  Fly   698 MWRYMENRKTAVFVKTYEDGIKRVM-EGSYAFLMESTMLDYAVQRD--CNLTQIGGLLDSKGYGI 759
            |..|:::.|  .|......||:.|. |...||:.::.:|||...:|  |.|..:|......||||
 Worm   759 MHEYVKHNK--YFRMNISAGIEAVKNEELDAFIYDAVVLDYWAGKDANCALMTVGKWASMTGYGI 821

  Fly   760 ATPKGSPWRDKISLAILELQEKGIIQILYDKWWKNTGDVCNRDDKSKESKANALGVENIGGVFVV 824
            ..||.||....::..:|:.|:||.::.|.:.|.  || .|..|..|:...| .||:||....||:
 Worm   822 GFPKNSPHTSLVNHYMLQYQQKGDLERLQNFWL--TG-ACTPDSHSQTQSA-PLGIENFLSAFVL 882

  Fly   825 LLCGLALAVVVAIFE--FCWNSRKNL--------------------------------NTENQSL 855
            |..|:.::|:|..||  :|.:.||.|                                .:..|||
 Worm   883 LAGGIIVSVIVLGFEHIYCMHLRKPLQKIDPNGWCGIISMAMGKSLTFTEAVDRVQEWRSRTQSL 947

  Fly   856 CSEMAEELRFAMHCHGSKSRHRPRKRSCLNCSSVPTYVPSN 896
            .|..:.:|:              |:||   .:..||..|.|
 Worm   948 ASTNSPQLK--------------RRRS---ANLRPTEEPFN 971

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG11155	NP_651941.2	PBP1_iGluR_Kainate	44..410	CDD:107377	91/449 (20%)
		ANF_receptor	61..393	CDD:279440	82/415 (20%)
		PBP2_iGluR_Kainate	424..793	CDD:270432	114/413 (28%)
		Lig_chan	555..829	CDD:278489	82/287 (29%)
nmr-2	NP_001256640.1	rSAM_ocin_1	<54..>108	CDD:274893	15/55 (27%)
		Periplasmic_Binding_Protein_type1	102..443	CDD:385651	77/392 (20%)
		Periplasmic_Binding_Protein_Type_2	460..860	CDD:389745	117/421 (28%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	2	1.910