DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG11155 and LOC110438919

DIOPT Version :9

Sequence 1:NP_651941.2 Gene:CG11155 / 43822 FlyBaseID:FBgn0039927 Length:910 Species:Drosophila melanogaster
Sequence 2:XP_021328141.1 Gene:LOC110438919 / 110438919 -ID:- Length:1417 Species:Danio rerio


Alignment Length:811 Identity:202/811 - (24%)
Similarity:337/811 - (41%) Gaps:181/811 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   112 FGPTDALLASHVQSICEAYDIPHIEGRIDLEYNSKEFSI--NLYPSHTLLTLAYRDIMVYLNWTK 174
            |||:....||.:.:|.|.||. :|            |||  ..||       .|:|.:     ||
Zfish     5 FGPSIEQQASVMLNIMEEYDW-YI------------FSIVTTYYP-------GYQDFV-----TK 44

  Fly   175 VAIIYEEDYGLFNLMHSSTETKAEMYIRQASPDSYRQVLRAIRQKEIYKIIVDTNPSHIKSFFRS 239
            :....|..:       ...|.:..:.:..:..|...::...:::.:...|::.:........|:.
Zfish    45 IRSTIENSF-------VGWELEEVLLLDMSVDDGDAKIQNLLKKLQSPVILLYSTKEEANIIFQV 102

  Fly   240 ILQLQMNDHRYHYMFTTFDLETYDLEDFRYNSVNITAFRLVDVDSKRYLEVINQMQKLQHNGLDT 304
            ...:.:..:.|.::..:......|.....:.:..|:    |..|...|             ||: 
Zfish   103 AHSVGLTGYGYTWIVPSLVAGDADHIPAEFPTGMIS----VSYDEWDY-------------GLE- 149

  Fly   305 INGSPYIQTESALMFDSVYAFANGLHFLNLDNHQNFYIKNLSC------TSDQTWNDGISLYNQI 363
                       |.:.|.|...|.....:.:|...:..:|: .|      .|..|.|:...|...:
Zfish   150 -----------ARVRDGVAVIATATSTMMMDRGPHTLLKS-ECHGAPDKKSPMTGNNNEVLRYLM 202

  Fly   364 NAAITDGLTGTVQFVEGRRNIFKLD----------ILKLKQEKIQKVGYWHPDDGVNI------- 411
            |...           |||...|..|          ||..|:.:..:||.|. :..:::       
Zfish   203 NVTF-----------EGRNLSFSEDGYQMHPKLVIILLDKERQWDRVGKWE-NGSLSMKYHVWPR 255

  Fly   412 ----SDPTAFYDSNIANITLVVMTREERPYVMVKEDKNLTGNLR--------------------- 451
                |.|.|..|.:::.:||     ||.|:|:|::...|:|...                     
Zfish   256 FELYSGPEAREDDHLSIVTL-----EEAPFVIVEDVDPLSGTCMRNTVPCRKQLKALNQTQDSAV 315

  Fly   452 -----FEGFCIDLLKAIATQVGFQYKIELVPDNMYGVYIPETNSWNGIVQELMERRADLAVASMT 511
                 .:|||||:||.||..|.|.|.:.||.:..:|..|  ..:|||:|.|::.:.|.:||.|:|
Zfish   316 YIKRCCKGFCIDILKKIAKNVKFTYDLYLVTNGKHGKKI--NGTWNGMVGEVVLKNAHMAVGSLT 378

  Fly   512 INYARESVIDFTKPFMNLGIGILFKVP--TSQPTRLFSFMNPLAIEIWLYVLAAYILVS-FALFV 573
            ||..|..||||:.||:..||.::....  |..|:   :|:.|.:.::|:.:....:||| .|:|:
Zfish   379 INEERSEVIDFSVPFIETGISVMVSRSNGTVSPS---AFLEPFSADVWIMMFVMLLLVSAIAVFI 440

  Fly   574 MARFSPYEWKNPHPCYKE-TDIVENQFSISNSFWFITGTFLRQGSGL-NPKATSTRIVGGCWFFF 636
            ...|||..:..   |..: .:.....|:|..:.|.:.|........: ||:.|:::|:...|.||
Zfish   441 FEYFSPVGYNR---CLADGREAGGPSFTIGKAIWLLWGLVFNNSVPVQNPRGTTSKIMVSVWAFF 502

  Fly   637 CLIIISSYTANLAAFLTVERMISPIESASDLAEQT------EISYGTLEGGSTMTFFRDSKIGIY 695
            .:|.::|||||||||:..|..:..:...||...|.      ...:||:..|||....|::    |
Zfish   503 AVIFLASYTANLAAFMIQEEYVDQVSGLSDKKFQNPNDFSPPFRFGTVPNGSTERNIRNN----Y 563

  Fly   696 QKMWRYMENRKTAVFVKTYEDGIKRVMEGSY-----AFLMESTMLDYAVQRD--CNLTQIGG--L 751
            :.|..||        ||.::..:...:|...     ||:.::.:|:|...||  |.|..||.  :
Zfish   564 RDMHSYM--------VKFHQRNVVEALESLKTGKLDAFIYDAAVLNYMAGRDEGCKLVTIGSGKV 620

  Fly   752 LDSKGYGIATPKGSPWRDKISLAILELQEKGIIQILYDKWWKNTGDVCNRDDKSKESKANALGVE 816
            ..|.|||||..|.|.|:.::.||||:|...|.::.|...|.  || :|:.:  ..|..::.|.|:
Zfish   621 FASTGYGIAIQKDSGWKRQVDLAILQLFGDGEMEELEALWL--TG-ICHHE--KNEVMSSQLDVD 680

  Fly   817 NIGGVFVVLLCGLALAVVVAIFE--FCWNSR 845
            |:.|||.:|...:||:::..|.|  |.|:.|
Zfish   681 NMAGVFYMLGAAMALSLITFIAEHVFYWHMR 711

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11155NP_651941.2 PBP1_iGluR_Kainate 44..410 CDD:107377 55/315 (17%)
ANF_receptor 61..393 CDD:279440 51/298 (17%)
PBP2_iGluR_Kainate 424..793 CDD:270432 125/414 (30%)
Lig_chan 555..829 CDD:278489 86/291 (30%)
LOC110438919XP_021328141.1 PBP1_iGluR_NMDA_NR2 <1..255 CDD:107373 55/323 (17%)
PBP2_iGluR_NMDA_Nr2 267..667 CDD:270436 129/427 (30%)
DUF4013 <389..478 CDD:315788 23/94 (24%)
NMDAR2_C 704..1417 CDD:313729 3/8 (38%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170591433
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1052
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.740

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