DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG11155 and si:dkey-183j2.10

DIOPT Version :9

Sequence 1:NP_651941.2 Gene:CG11155 / 43822 FlyBaseID:FBgn0039927 Length:910 Species:Drosophila melanogaster
Sequence 2:XP_001923977.1 Gene:si:dkey-183j2.10 / 100151589 ZFINID:ZDB-GENE-130530-729 Length:465 Species:Danio rerio


Alignment Length:438 Identity:157/438 - (35%)
Similarity:253/438 - (57%) Gaps:25/438 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly   427 LVVMTREERPYVMVKEDKNLTGNLRFEGFCIDLLKAIATQVGFQYKIELVPDNMYGVYIPETNSW 491
            |:|.|.::.||.|.|       ..:.||:|:|||..:|.::||:||:.||.|..||.. .|..:|
Zfish    31 LIVTTIKQDPYTMSK-------GSQLEGYCMDLLTELAKKLGFKYKVHLVKDGSYGRQ-DENGNW 87

  Fly   492 NGIVQELMERRADLAVASMTINYARESVIDFTKPFMNLGIGILF-KVPTSQPTRLFSFMNPLAIE 555
            ||::.|::...||||||.:|:..|||..:..|||:|..||.||. |...|:....|.|::|.:.|
Zfish    88 NGMIGEVVRGEADLAVAPLTLTAAREKAVGMTKPYMQTGISILLRKDIVSEEAGFFDFLSPFSGE 152

  Fly   556 IWLYVLAAYILVSFALFVMARFSPYEWKNPHPCYKETDIVENQFSISNSFWFITGTFLRQGSGLN 620
            .|..:|.||.:.:..:.::.|.||.||..|     ||:  .|.|::.:|.|:..|....||:|.:
Zfish   153 TWFGILIAYFVTAVCICIVGRLSPCEWSQP-----ETE--PNHFTLLHSLWYTAGALSLQGAGPH 210

  Fly   621 PKATSTRIVGGCWFFFCLIIISSYTANLAAFLTVERMISPIESASDLAEQTEISYGTLEGGSTMT 685
            |||.|.|::...|:.|.:::::.|.::|::....:.....|:...|||.|..|.||||.|.||:.
Zfish   211 PKAVSGRVISCTWWLFAVVLLACYFSSLSSTQGSDSAPLMIKGFEDLANQDVIEYGTLAGSSTLA 275

  Fly   686 FFRDSKIGIYQKMWRYMENRKTAVFVKTYEDGIKRVMEGSYAFLMESTMLDYAVQRDCNLTQIGG 750
            ||::|....|::::.:||.||:  ||.:.::|:::..||:|||:.||..||.||.|.|.|.:...
Zfish   276 FFKNSNNPSYRRIYEHMERRKS--FVSSMDEGVQKAKEGNYAFIGESVSLDLAVARHCELVRAHE 338

  Fly   751 LLDSKGYGIATPKGSPWRDKISLAILELQEKGIIQILYDKWWKNTGDVCNRDDKSKESKANALGV 815
            ::..:||.|.||.||.....:|:|||:|.|.|.:..|..|||.::   |..|:    :||::|..
Zfish   339 VIGMRGYSIVTPLGSAMLKNLSVAILQLSEAGELAYLRTKWWASS---CLPDN----AKASSLRA 396

  Fly   816 ENIGGVFVVLLCGLALAVVVAIFEFCWNSRKNLNTENQSLCSEMAEEL 863
            .::.|:|:||..||.:.|::::||....||.....:.:|.|:.:.:||
Zfish   397 HSMKGIFLVLAIGLGIGVLLSLFELTTKSRSAAGEQKKSCCTVLTQEL 444

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11155NP_651941.2 PBP1_iGluR_Kainate 44..410 CDD:107377
ANF_receptor 61..393 CDD:279440
PBP2_iGluR_Kainate 424..793 CDD:270432 136/366 (37%)
Lig_chan 555..829 CDD:278489 95/273 (35%)
si:dkey-183j2.10XP_001923977.1 PBP2_iGluR_non_NMDA_like 28..381 CDD:270403 136/366 (37%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1052
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000021
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR18966
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
54.910

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