DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG11155 and LOC100149482

DIOPT Version :9

Sequence 1:NP_651941.2 Gene:CG11155 / 43822 FlyBaseID:FBgn0039927 Length:910 Species:Drosophila melanogaster
Sequence 2:XP_009290417.1 Gene:LOC100149482 / 100149482 -ID:- Length:1959 Species:Danio rerio


Alignment Length:619 Identity:166/619 - (26%)
Similarity:267/619 - (43%) Gaps:143/619 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   343 KNLSCTSDQTWND--------GISLYNQINAAITD--GLTGTVQFV-------------EGRRNI 384
            |.|.....|.|.|        |:|:......|:..  |.||...||             .||...
Zfish   302 KRLFAVRPQGWRDEPRRRIARGVSILTHGAVALRKDYGATGGPHFVTNCQTDGNRTQRIRGRMRY 366

  Fly   385 FK---------------------LDILKLKQ-EKIQKVGYWH--------------------PDD 407
            |.                     ||::.... ...:.||:|.                    |||
Zfish   367 FSNITLGGRDYSFSNEGYLANPFLDVISYTPGSGWEDVGWWENGVLRLRYPAWSRYGPFLQPPDD 431

  Fly   408 GVNISDPTAFYDSNIANITLVVMTREERPYVMVKEDKNLTGN-LR-------------------- 451
            ..:                |.|:|.||||:|:|:.....:|. :|                    
Zfish   432 AQH----------------LRVVTLEERPFVIVELADAASGTCIRDSVPCRRPLNASALQEGVAP 480

  Fly   452 ----FEGFCIDLLKAIATQVGFQYKIELVPDNMYGVYIPETNSWNGIVQELMERRADLAVASMTI 512
                .:|||||:||.:|..|||.|.:.||.:..:|..|  ...|||:|.|::.:|||:|:.|:||
Zfish   481 VKQCCKGFCIDILKRLARIVGFTYDLYLVTNGKHGKKI--DGVWNGMVGEVVYKRADMAIGSLTI 543

  Fly   513 NYARESVIDFTKPFMNLGIGILFKVP--TSQPTRLFSFMNPLAIEIWLYVLAAYI-LVSFALFVM 574
            |..|..|:||:.||:..||.::....  |..|:   :|:.|.:..:|:.:....: :|:..:|:.
Zfish   544 NEERSEVVDFSVPFVETGISVMVSRSNGTVSPS---AFLEPYSPAVWVMMFVMCLTVVAVTVFIF 605

  Fly   575 ARFSPYEWKNPHPCYKETDIVENQFSISNSFWFITGTFLRQGSGL-NPKATSTRIVGGCWFFFCL 638
            ..|||..:.......|:..  .::|:|..|.|.:..........: |||.|:::|:...|.||.:
Zfish   606 EFFSPVGYNRSLQSGKKAG--GSKFTIGKSIWLLWALVFNNSVPVENPKGTTSKIMVLVWAFFAV 668

  Fly   639 IIISSYTANLAAFLTVERMISPIESASDLAEQ--TE----ISYGTLEGGSTMTFFRDSKIGIYQK 697
            |.::|||||||||:..|..|..:...||...|  ||    :.:||:..|||....|.:...::|.
Zfish   669 IFLASYTANLAAFMIQEEYIDTVSGLSDKKFQHPTEQYPPLKFGTVPNGSTEKNIRSNYPDMHQY 733

  Fly   698 MWRYMENRKTAVFVKTYEDGIKRVMEGSY-AFLMESTMLDYAVQRD--CNLTQIGG--LLDSKGY 757
            |.:|.:        |:.||.|..:..|.. ||:.::.:|:|..::|  |.:..||.  :..:.||
Zfish   734 MVKYNQ--------KSVEDAISHLKTGKLDAFIYDAAVLNYMARKDEGCKVMTIGSGKVFATTGY 790

  Fly   758 GIATPKGSPWRDKISLAILELQEKGIIQILYDKWWKNTGDVCNRDDKSKESKANALGVENIGGVF 822
            |||..|.|.|:..:.||:|:|.....|::|...|   ...:|:.|  ..|..::.|.::|:.|||
Zfish   791 GIALIKNSRWKRPLDLALLQLVGDDEIEMLERLW---LSGICHND--KIEVMSSKLDIDNMAGVF 850

  Fly   823 VVLLCGLALAVVVAIFEFC--WNSRKNLNTENQS 854
            .:||..:.|:::|..:|..  |..|..::...||
Zfish   851 YMLLVAMGLSLLVFAWEHLVYWRLRHCMSKMGQS 884

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11155NP_651941.2 PBP1_iGluR_Kainate 44..410 CDD:107377 24/131 (18%)
ANF_receptor 61..393 CDD:279440 18/93 (19%)
PBP2_iGluR_Kainate 424..793 CDD:270432 125/408 (31%)
Lig_chan 555..829 CDD:278489 83/286 (29%)
LOC100149482XP_009290417.1 PBP1_iGluR_NMDA_NR2 44..421 CDD:107373 21/118 (18%)
PBP2_iGluR_NMDA_Nr2 433..831 CDD:270436 126/431 (29%)
HisJ <487..>570 CDD:223904 37/84 (44%)
Lig_chan 585..857 CDD:278489 83/286 (29%)
NMDAR2_C 868..>900 CDD:287527 4/17 (24%)
FAM76 <1763..>1856 CDD:292665
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1052
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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