Protein Alignment CG11155 and gria1

DIOPT Version :9

• Sequence 1: NP_651941.2
• Gene: CG11155 / 43822
• FlyBaseID: FBgn0039927
• Length: 910
• Species: Drosophila melanogaster
• Sequence 2: XP_004912781.1
• Gene: gria1 / 100127569
• XenbaseID: XB-GENE-995621
• Length: 903
• Species: Xenopus tropicalis
• Alignment Length: 879
• Identity: 341/879 - (38%)
• Similarity: 502/879 - (57%)
• Gaps: 64/879 - (7%)

  Fly    26 SYIILSIL--VISNALPPVIRVGAIFTEDERESSIESAFKYAIYRINKEKTLLPNTQLVYDIEYV 88
            :|...|.|  |:....|..|::|.:|  ..::|...:||::|:.::::...|||      .|:.|
 Frog     6 AYFCTSFLGAVLGVNFPNHIQIGGLF--PNQQSQEHAAFRFALSQLSEPPKLLP------QIDIV 62

  Fly    89 PRDDSFRTTKKVCSQLEAGVQAIFGPTDALLASHVQSICEAYDIPHIEGRIDLEYNSKEFSINLY 153
            ...|||..|...|||...||.||||..|....:.:.|.|.|..:..|.....:. .|.:|.:.|.
 Frog    63 NISDSFEMTYTFCSQFSKGVYAIFGFYDRKTVNMLTSFCGALHVCFITPSFPVA-TSNQFVLQLR 126

  Fly   154 PSHTLLTLAYRDIMVYLNWTKVAIIYEEDYGLFNLMHSSTETKAE-------MYIRQASPDSYRQ 211
            |.   |..|...::.|..|.|...||:.|.|| :::....:|.||       :.|...:.:.||.
 Frog   127 PE---LQDALISVIEYYKWKKFVYIYDADRGL-SVLQKVLDTAAEKNWQVTAVNILTTTEEGYRL 187

  Fly   212 VLRAIRQKEIYKIIVDTNPSHIKSFF-RSILQLQMNDHRYHYMFTTFDLETYDLEDFRYNSVNIT 275
            :.:.:.:.:..:|::|.....:.:.. :.:::|:.|...|||:.........|::.|:....|:|
 Frog   188 LFQDLDKSKDRQIVIDCESERLNAILTQVVVKLEKNIIGYHYILANLGFMDIDMQKFKEAGANVT 252

  Fly   276 AFRLVDVDSKRYLEVINQMQKLQHNGLDTINGSPYIQTE-----SALMFDSVYAFANGLHFLNLD 335
            .|:||:........::.|.:  .::|.:    .|.:..:     |||.:|.|...|.....|
 Frog   253 GFQLVNYTDTMVSRIMQQWK--NYDGRE----QPRVDWKKPKYTSALTYDGVRVMAEAFQSL--- 308

  Fly   336 NHQNFYIKNLSCTSD------QTWNDGISLYNQINAAITDGLTGTVQFVE-GRRNIFKLDILKLK 393
            ..|...|.......|      ..|..||.:...:.....:||:|.|||.| |||..:.|.:|:||
 Frog   309 RKQRIDISRRGNAGDCLANPAVPWGQGIDIQRALQQVRLEGLSGNVQFNEKGRRTNYTLHVLELK 373

  Fly   394 QEKIQKVGYWHPDDGV--NISDPTAFYDS-NIANITLVVMTREERPYVMVKEDKN-LTGNLRFEG 454
            .|.|:.:.:|:.||.:  ..:|..|..|: .:.|.|.:|.|..|.||||:|::.: |.||.||||
 Frog   374 HEGIRHIAHWNEDDKLIPLATDAQAGNDTIGVQNRTYIVTTILEAPYVMLKKNADQLEGNDRFEG 438

  Fly   455 FCIDLLKAIATQVGFQYKIELVPDNMYGVYIPETNSWNGIVQELMERRADLAVASMTINYARESV 519
            :|::|...||..|||:||:|:|.|..||....:..:|||:|.||:..|||||||.:||...||.|
 Frog   439 YCVELAAEIAKHVGFKYKLEIVKDGKYGARDSDMKAWNGMVGELVYGRADLAVAPLTITLVREEV 503

  Fly   520 IDFTKPFMNLGIGILFKVPTSQPTRLFSFMNPLAIEIWLYVLAAYILVSFALFVMARFSPYEWKN 584
            |||:||||:|||.|:.|.|......:|||::|||.|||:.::.|||.||..||:::|||||||.|
 Frog   504 IDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFSPYEWHN 568

  Fly   585 PHPCYKE-----TDIVENQFSISNSFWFITGTFLRQGSGLNPKATSTRIVGGCWFFFCLIIISSY 644
            ..  ::|     |....|:|.|.||.||..|.|::||..::|::.|.|||||.|:||.|||||||
 Frog   569 EE--FEEGKEQPTTDQSNEFGIFNSLWFSLGAFMQQGCDISPRSLSGRIVGGVWWFFTLIIISSY 631

  Fly   645 TANLAAFLTVERMISPIESASDLAEQTEISYGTLEGGSTMTFFRDSKIGIYQKMWRYMENRKTAV 709
            |||||||||||||:||||||.|||:||||:||||:.|||..||:.|||.:::|||.||.:.:.:|
 Frog   632 TANLAAFLTVERMVSPIESADDLAKQTEIAYGTLDSGSTKEFFKRSKIAVFEKMWTYMRSAEPSV 696

  Fly   710 FVKTYEDGIKRV--MEGSYAFLMESTMLDYAVQR-DCNLTQIGGLLDSKGYGIATPKGSPWRDKI 771
            ||||.|:|:.||  .:|.||:|:||||.:|..|| .|:..::||.|||||||||||||||.|..:
 Frog   697 FVKTTEEGMNRVRKSKGKYAYLLESTMNEYIEQRKPCDTMKVGGNLDSKGYGIATPKGSPLRGAV 761

  Fly   772 SLAILELQEKGIIQILYDKWWKNTGDVCNRDDKSKESKANALGVENIGGVFVVLLCGLALAVVVA 836
            :||:|:|.|:|::..|..|||.:.|: |...|...:.|.:||.:.|:.|||.:|:.||.||::||
 Frog   762 NLAVLKLSEQGVLDKLKSKWWYDKGE-CGSKDSGSKDKTSALSLSNVAGVFYILIGGLGLAMLVA 825

  Fly   837 IFEFCWNSRKNLNTENQSLC----SEMAEELRFA 866
            :.|||:.||.. :.:.:..|    :.:.|.:|.|
 Frog   826 LIEFCYKSRSE-SKKMKGFCLIPQTTVTETVRMA 858

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG11155	NP_651941.2	PBP1_iGluR_Kainate	44..410	CDD:107377	98/387 (25%)
		ANF_receptor	61..393	CDD:279440	88/351 (25%)
		PBP2_iGluR_Kainate	424..793	CDD:270432	207/377 (55%)
		Lig_chan	555..829	CDD:278489	151/281 (54%)
gria1	XP_004912781.1	PBP1_iGluR_AMPA_GluR1	26..393	CDD:380613	98/388 (25%)
		PBP2_iGluR_AMPA_GluR1	407..788	CDD:270447	209/383 (55%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	1	1.000	-	-		FOG0000021
OrthoInspector	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	1.000