DRSC/TRiP Functional Genomics Resources

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Protein Alignment Kif3C and KIP1

DIOPT Version :10

Sequence 1:NP_651939.4 Gene:Kif3C / 43820 FlyBaseID:FBgn0039925 Length:649 Species:Drosophila melanogaster
Sequence 2:NP_009490.1 Gene:KIP1 / 852216 SGDID:S000000159 Length:1111 Species:Saccharomyces cerevisiae


Alignment Length:725 Identity:212/725 - (29%)
Similarity:343/725 - (47%) Gaps:140/725 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 NIKVVVRCRPMNQTEKERNCQNIVEI-----NEFAVSVTNPSARISQQKKFIFDSVYNMKTDTEV 63
            ||.|.||||..|:.|.|.....::..     .|..:|..:..:..|.:|.:.||.|:..::|.|.
Yeast    52 NIHVYVRCRSRNKREIEEKSSVVISTLGPQGKEIILSNGSHQSYSSSKKTYQFDQVFGAESDQET 116

  Fly    64 IYDEMCYSLVESTIEGYNGTIFAYGQTGCGKTHTMQGDEN------------FSNSTGIIPKCFD 116
            :::....:.::..:.|||.|||||||||.|||:||.||.|            .....||||:...
Yeast   117 VFNATAKNYIKEMLHGYNCTIFAYGQTGTGKTYTMSGDINILGDVQSTDNLLLGEHAGIIPRVLV 181

  Fly   117 HIFERISMTTNVRYLALVTYLEIYNERIRDLL---------------------NKNENTNVINHF 160
            .:|:.:| :.|..|...:::||:|||.::|||                     |.|.|::::...
Yeast   182 DLFKELS-SLNKEYSVKISFLELYNENLKDLLSDSEDDDPAVNDPKRQIRIFDNNNNNSSIMVKG 245

  Fly   161 LKELPGIGVSVPTLTTQPVVN-ANQCYDWLHFGNKNRVTAATLMNKNSSRSHTIFTITLEQSPFL 224
            ::|:              .:| |::..:.|..|:..|..|||..|..||||||:||||      .
Yeast   246 MQEI--------------FINSAHEGLNLLMQGSLKRKVAATKCNDLSSRSHTVFTIT------T 290

  Fly   225 NSIGSDA--------FGGICRGKLSLVDLAGSERQRKTGAQGDRLKEASQINLSLSALGNVISSL 281
            |.:..|:        |..|  |||:||||||||...::||:..|.:||..||.||..||.||::|
Yeast   291 NIVEQDSKDHGQNKNFVKI--GKLNLVDLAGSENINRSGAENKRAQEAGLINKSLLTLGRVINAL 353

  Fly   282 VDGKAKHVPFRDSKLTRLLQDSLGGNTKTLMISCISPTDIHYDETISTLRYASRAKNISNKPKIN 346
            || .:.|:|:|:|||||||||||||.|||.:|:.|||..|..:||.|||.||:|||:|.|.|::|
Yeast   354 VD-HSNHIPYRESKLTRLLQDSLGGMTKTCIIATISPAKISMEETASTLEYATRAKSIKNTPQVN 417

  Fly   347 ED-PKDARLRQYQNEILYLKRMLQESQQIINKNNDPNKIIKSPLKIIQHTN-MNSTKNVQIIDLG 409
            :. .||..|:.|..||..|:..|:.|     :|.....|.:..|.:.:..: :...:|::|.:|.
Yeast   418 QSLSKDTCLKDYIQEIEKLRNDLKNS-----RNKQGIFITQDQLDLYESNSILIDEQNLKIHNLR 477

  Fly   410 RNCKASFKTN-------NSILTKPNFPLI-----------QSKEEVQLQARSRIDLIKRSLIGGE 456
            ...| .||.|       |::|......||           ....|:|....:.::|:...:    
Yeast   478 EQIK-KFKENYLNQLDINNLLQSEKEKLIAIIQNFNVDFSNFYSEIQKIHHTNLELMNEVI---- 537

  Fly   457 RIHDFELKEKHMARKYAAQRHLSAIAIALSRVKCEDRDLLQGHYATITQEIDIKNDYIRKCKEKI 521
            :..||.|:...  ::|...:::.   :.:|:...:..:.|||..          |:|..||.|.|
Yeast   538 QQRDFSLENSQ--KQYNTNQNMQ---LKISQQVLQTLNTLQGSL----------NNYNSKCSEVI 587

  Fly   522 KMLEMEV------------SDLNSEFQLDREDYLDEIRNLGRQVKFHQQLFLKFSSNPGKFDRN- 573
            |.:..|:            |.|.|...:.....::::..|.|.:....::|...|::..:.|.| 
Yeast   588 KGVTEELTRNVNTHKAKHDSTLKSLLNITTNLLMNQMNELVRSISTSLEIFQSDSTSHYRKDLNE 652

  Fly   574 --WTPDTILQNSLWNDDLK--MWRIPESDLIKLPPATQK--SGLHCIHPLVIHSENQHNNQNEIV 632
              .:....|:|  ..:|:|  :..|..|.|..:...:|.  :.|:.::.|:   |||.:..::::
Yeast   653 IYQSHQQFLKN--LQNDIKSCLDSIGSSILTSINEISQNCTTNLNSMNVLI---ENQQSGSSKLI 712

  Fly   633 VGEKVSISNI 642
            ..:.:.|..:
Yeast   713 KEQDLEIKKL 722

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Kif3CNP_651939.4 Motor_domain 3..339 CDD:473979 143/381 (38%)
KIP1NP_009490.1 KISc_BimC_Eg5 50..419 CDD:276815 147/390 (38%)
235kDa-fam <423..>948 CDD:130673 64/330 (19%)
AAA_13 <562..>741 CDD:463796 35/176 (20%)

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