DRSC/TRiP Functional Genomics Resources

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Protein Alignment Kif3C and AT1G73860

DIOPT Version :10

Sequence 1:NP_651939.4 Gene:Kif3C / 43820 FlyBaseID:FBgn0039925 Length:649 Species:Drosophila melanogaster
Sequence 2:NP_177527.3 Gene:AT1G73860 / 843722 AraportID:AT1G73860 Length:1025 Species:Arabidopsis thaliana


Alignment Length:480 Identity:158/480 - (32%)
Similarity:246/480 - (51%) Gaps:52/480 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 NIKVVVRCRPMNQTEKERNCQNIVEI--NEFAVSVTNPSARISQQ--KKFIFDSVYNMKTDTEVI 64
            ||:|..|.||....:...|  .:||.  .:..:.||||: |..:.  ::|.|:.||:.......:
plant   509 NIRVFCRVRPFLPAQGAAN--TVVEYVGEDGELVVTNPT-RPGKDGLRQFKFNKVYSPTASQADV 570

  Fly    65 YDEMCYSLVESTIEGYNGTIFAYGQTGCGKTHTMQGDENFSNST-GIIPKCFDHIFERISMTT-- 126
            :.:: ..||.|.::|||..||||||||.|||:||.|.:..|... |:..:..:.:| :||.:.  
plant   571 FSDI-RPLVRSVLDGYNVCIFAYGQTGSGKTYTMTGPDGSSEEDWGVNYRALNDLF-KISQSRKG 633

  Fly   127 NVRYLALVTYLEIYNERIRDLLNKNENTNVINHFLKELPGIGVSVPTLTTQPVVNANQCYDWLHF 191
            |:.|...|..:|||||::.|||:.:.:.......|......|::||..:..||.:.:.....:..
plant   634 NISYEVGVQMVEIYNEQVLDLLSDDNSQKKTLGILSTTQQNGLAVPDASMYPVTSTSDVITLMDI 698

  Fly   192 GNKNRVTAATLMNKNSSRSHTIFTITLEQSPFLNSIGSD-AFGGICRGKLSLVDLAGSERQRKTG 255
            |.:||...:|.:|:.|||||:|.|:.:.        |.| ..|.:..|.|.|||||||||..::.
plant   699 GLQNRAVGSTALNERSSRSHSIVTVHVR--------GKDLKTGSVLYGNLHLVDLAGSERVDRSE 755

  Fly   256 AQGDRLKEASQINLSLSALGNVISSLVDGKAKHVPFRDSKLTRLLQDSLGGNTKTLMISCISPTD 320
            ..||||:||..||.|||:||:||.||. .|:.|||:|:||||:|||.||||..||||...::|..
plant   756 VTGDRLREAQHINKSLSSLGDVIFSLA-SKSSHVPYRNSKLTQLLQTSLGGRAKTLMFVQLNPDA 819

  Fly   321 IHYDETISTLRYASRAKNIS-NKPKINEDPKDARLRQYQNEILYLK-RMLQESQQIINKNNDPNK 383
            ..|.|::|||::|.|...:. ...|.:::.||  :|....::..|| .:.::.::|....:.|.:
plant   820 TSYSESMSTLKFAERVSGVELGAAKTSKEGKD--VRDLMEQLASLKDTIARKDEEIERLQHQPQR 882

  Fly   384 IIKSPL--KIIQHTN--------MNSTKNVQIID---LGRNCKASFKTNNSILTKPNFPLIQSKE 435
            :.||.:  |.|.||:        .:|.....:.|   |..:.:|.:....|.:|         .:
plant   883 LQKSMMRRKSIGHTDDINSDTGEYSSQSRYSVTDGESLASSAEAEYDERLSEIT---------SD 938

  Fly   436 EVQLQARSRIDLIKRSLIGGERIHD 460
            ...:..:..||:.||.    .||.|
plant   939 AASMGTQGSIDVTKRP----PRISD 959

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Kif3CNP_651939.4 Motor_domain 3..339 CDD:473979 131/342 (38%)
AT1G73860NP_177527.3 SMC_prok_B <172..508 CDD:274008
Motor_domain 507..840 CDD:473979 131/344 (38%)
Blue background indicates that the domain is not in the aligned region.

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