DRSC/TRiP Functional Genomics Resources

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Protein Alignment Kif3C and AT5G60930

DIOPT Version :9

Sequence 1:NP_651939.4 Gene:Kif3C / 43820 FlyBaseID:FBgn0039925 Length:649 Species:Drosophila melanogaster
Sequence 2:NP_001332385.1 Gene:AT5G60930 / 836214 AraportID:AT5G60930 Length:1335 Species:Arabidopsis thaliana


Alignment Length:665 Identity:199/665 - (29%)
Similarity:310/665 - (46%) Gaps:146/665 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 SENIKVVVRCRPMNQTEKERNCQNIVEINEFAVSVTNPSARISQQKKFIFDSVY-NMKTDTEVIY 65
            :|.::|.|..||:...|....|.:.:     .|:...|...|... .|.:|.|| |.......||
plant     4 TECVRVAVNIRPLITPELLNGCTDCI-----TVAPKEPQVHIGSH-TFTYDFVYGNGGYPCSEIY 62

  Fly    66 DEMCYSLVESTIEGYNGTIFAYGQTGCGKTHTMQGDENFS---NSTGIIPKCFDHIFERISMTTN 127
            :.....||::..:|||.|:.||||||.|||:||  ..|:|   .:.|:||...:.||.|:..|.:
plant    63 NHCVAPLVDALFKGYNATVLAYGQTGSGKTYTM--GTNYSGDCTNGGVIPNVMEDIFRRVETTKD 125

  Fly   128 VRYLAL-VTYLEIYNERIRDLLNKNENTNVINHF---------------LKELPGIGVSVPTLTT 176
            ...|.: |:::||:.|.:.|||:.|.:..:.|..               ::|....|:::..:|.
plant   126 SSELLIRVSFIEIFKEEVFDLLDSNSSALLKNDSGVQAKHTALSRAPIQIRETASGGITLAGVTE 190

  Fly   177 QPVVNANQCYDWLHFGNKNRVTAATLMNKNSSRSHTIFTITLEQSPFLNSIGSDAFGGICR---- 237
            ..|....:...:|..|:.:|.|.:|.||..|||||.||||||||....        ||.|.    
plant   191 AEVKTKEEMGSFLARGSLSRATGSTNMNSQSSRSHAIFTITLEQKKIA--------GGSCTTTED 247

  Fly   238 -------GKLSLVDLAGSERQRKTGAQGDRLKEASQINLSLSALGNVISSLVDGKAK----HVPF 291
                   .||.|||||||||.::|||.|.||||...||..|.|||||||:|.|.|.:    |||:
plant   248 GGEDILCAKLHLVDLAGSERAKRTGADGMRLKEGIHINKGLLALGNVISALGDEKKRKEGGHVPY 312

  Fly   292 RDSKLTRLLQDSLGGNTKTLMISCISPTDIHYDETISTLRYASRAKNISNKPKINEDPKDARLRQ 356
            ||||||||||||||||:||:||:|:||.|.:.:||::||:||:||:||.||..||.||..|::::
plant   313 RDSKLTRLLQDSLGGNSKTVMIACVSPADTNAEETLNTLKYANRARNIQNKAVINRDPATAQMQR 377

  Fly   357 YQNEILYLKRMLQESQQIINKNN----DPNKIIKSPLKIIQHTN--------------------- 396
            .:::|..|     :::.:..:.:    |..:|:|..:.:::.:|                     
plant   378 MRSQIEQL-----QTELLFYRGDSGAFDELQILKHKISLLEASNRELHNELQERRVASEHFSKRA 437

  Fly   397 ----MNSTKNVQIIDLGRNCKASFKTNNSILTKPNFPLIQSKEEVQLQARSRIDLIKRSL----- 452
                :...|.:.||:..||.|                   |.:|::......:.|:.:.:     
plant   438 YDAQVEKDKLIMIIESVRNGK-------------------SLDEIESCQNEDVGLVNKYVSKIQE 483

  Fly   453 IGGERIHDFELKE----KHMARKYAAQRHLSAIAIALSRVK--CEDRDLLQGHYATITQEIDIKN 511
            :.||.:|...||:    ::....|......:.:....|...  |||:.:      .:|.|::.:.
plant   484 LEGELLHIKNLKKTSNHQYSDDSYDVGPRSNNVLFPSSNESSDCEDKVM------DVTDELEFQE 542

  Fly   512 DYIRKCKEKIKMLEMEVSDLNSEFQLDRE-----------------------DYLDEIRNLGRQV 553
            ..|..|..:.| |:||:.:|:...: ::|                       |...|.|.|.|::
plant   543 KEIEHCSLQEK-LDMELKELDKRLE-EKEAEMKRFSSGGTSVLKQHYEKKVYDLEQEKRALQREI 605

  Fly   554 KFHQQLFLKFSSNPG 568
            :..:.......|.||
plant   606 EGLRHNLASIPSGPG 620

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Kif3CNP_651939.4 Motor_domain 3..339 CDD:277568 147/370 (40%)
Kinesin 10..339 CDD:278646 144/363 (40%)
AT5G60930NP_001332385.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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