DRSC/TRiP Functional Genomics Resources

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Protein Alignment Kif3C and FRA1

DIOPT Version :9

Sequence 1:NP_651939.4 Gene:Kif3C / 43820 FlyBaseID:FBgn0039925 Length:649 Species:Drosophila melanogaster
Sequence 2:NP_199593.2 Gene:FRA1 / 834833 AraportID:AT5G47820 Length:1035 Species:Arabidopsis thaliana


Alignment Length:748 Identity:221/748 - (29%)
Similarity:350/748 - (46%) Gaps:173/748 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 NIKVVVRCRPMNQTEKERNCQNIVEINEFAVSVT-NPSARISQQKKFIFDSVYNM--KTDTEVIY 65
            ::||.|..||:...|:.:.||:.|.:      || .|..:|... .|.||.||..  ...|| :|
plant    11 SVKVAVHIRPLIGDERIQGCQDCVTV------VTGKPQVQIGSH-SFTFDHVYGSSGSPSTE-MY 67

  Fly    66 DEMCYSLVESTIEGYNGTIFAYGQTGCGKTHTMQGDENFSNSTGIIPKCFDHIFERI-SMTTNVR 129
            :|....||:...:|||.|:.||||||.|||:||......|:.|||||:..:.:|.:| ::...:.
plant    68 EECAAPLVDGLFQGYNATVLAYGQTGSGKTYTMGTGCGDSSQTGIIPQVMNALFTKIETLKQQIE 132

  Fly   130 YLALVTYLEIYNERIRDLL-----NKNENTNVINHFLK--ELPG-------------------IG 168
            :...|:::||:.|.::|||     ||:: ||...|..|  .:||                   ..
plant   133 FQIHVSFIEIHKEEVQDLLDPCTVNKSD-TNNTGHVGKVAHVPGKPPIQIRETSNGVITLAGSTE 196

  Fly   169 VSVPTLTTQPVVNANQCYDWLHFGNKNRVTAATLMNKNSSRSHTIFTITLEQSPFLN--SIGSDA 231
            |||.||.....     |.|.   |:.:|.|.:|.||..|||||.|||||:||...:|  |..:.|
plant   197 VSVSTLKEMAA-----CLDQ---GSVSRATGSTNMNNQSSRSHAIFTITVEQMRKINTDSPENGA 253

  Fly   232 FGG------ICRGKLSLVDLAGSERQRKTGAQGDRLKEASQINLSLSALGNVISSLVDGKAK--- 287
            :.|      :| .||.|||||||||.::||:.|.|.||...||..|.|||||||:|.|.|.:   
plant   254 YNGSLKEEYLC-AKLHLVDLAGSERAKRTGSDGLRFKEGVHINKGLLALGNVISALGDEKKRKDG 317

  Fly   288 -HVPFRDSKLTRLLQDSLGGNTKTLMISCISPTDIHYDETISTLRYASRAKNISNKPKINEDPKD 351
             |||:||||||||||||||||::|:||:||||.||:.:||::||:||:||:||.|||.:|.||..
plant   318 AHVPYRDSKLTRLLQDSLGGNSRTVMIACISPADINAEETLNTLKYANRARNIRNKPVVNRDPVS 382

  Fly   352 ARLRQYQNEILYLK---------------RMLQE--------SQQIINKNNDPNKIIKSPLKIIQ 393
            :.:.:.:.::.||:               :.|:|        ::::..:.::    .:|....::
plant   383 SEMLKMRQQVEYLQAELSLRTGGSSCAEVQALKERIVWLETANEELCRELHE----YRSRCPGVE 443

  Fly   394 HTNMNSTKNVQIIDL-GRNCKASFKTNNSILTKPNFPLIQS------------------------ 433
            |:. ...|:::..|: |.......|.:...:...|:|::::                        
plant   444 HSE-KDFKDIRADDIVGSVRPDGLKRSLHSIESSNYPMVEATTGDSREIDEEAKEWEHKLLQNSM 507

  Fly   434 -KEEVQLQARSRIDLIKRSLIGGERIHDFELKEKHMARKYA-AQRHLSAIAIALSRVKCEDRDLL 496
             ||..:|..|......:..|..|   :|....::|..:|.| .:....::....:|:..|..:|.
plant   508 DKELYELNRRLEEKESEMKLFDG---YDPAALKQHFGKKIAEVEDEKRSVQEERNRLLAEIENLA 569

  Fly   497 QGHYATITQEIDIKNDYIRKCKEKIKMLEMEVSDL----NSEFQLDRED---------YLDEIRN 548
            ....|...|::..:|         :|.||.::.||    .|:.||.::.         ..|||::
plant   570 SDGQAQKLQDVHAQN---------LKALEAQILDLKKKQESQVQLLKQKQKSDDAARRLQDEIQS 625

  Fly   549 LGRQVKFHQQLFLKFSSNPGKFDRNWTPDTILQNSLWNDDLKMWRIP-ESDLIKLPPATQKSGL- 611
            :..| |...|..:|..:                     :..:.|:.. |.:|::|....:||.. 
plant   626 IKAQ-KVQLQHRMKQEA---------------------EQFRQWKASREKELLQLRKEGRKSEYE 668

  Fly   612 -HCIHPLVIHSENQHNNQNEIVVGEKVSISNIA 643
             |.:..|        |.:.::|:..|...:.:|
plant   669 RHKLQAL--------NQRQKMVLQRKTEEAAMA 693

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Kif3CNP_651939.4 Motor_domain 3..339 CDD:277568 158/376 (42%)
Kinesin 10..339 CDD:278646 155/370 (42%)
FRA1NP_199593.2 KISc_KIF4 10..371 CDD:276823 159/377 (42%)
SbcC <490..>912 CDD:223496 43/246 (17%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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