DRSC/TRiP Functional Genomics Resources

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Protein Alignment Kif3C and AT3G44050

DIOPT Version :9

Sequence 1:NP_651939.4 Gene:Kif3C / 43820 FlyBaseID:FBgn0039925 Length:649 Species:Drosophila melanogaster
Sequence 2:NP_189991.2 Gene:AT3G44050 / 823523 AraportID:AT3G44050 Length:1263 Species:Arabidopsis thaliana


Alignment Length:693 Identity:207/693 - (29%)
Similarity:318/693 - (45%) Gaps:154/693 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 NIKVVVRCRPMNQTE--KERNCQNIVEINEFAVS-VTNPSARISQQKKFIFDSVYNMKTDTEVIY 65
            |::|::|.||::.:|  .:.|.:.:.:.|..|:: :.||.:|      |.||.|.:.....|.::
plant    93 NVQVIIRTRPLSSSEISVQGNNKCVRQDNGQAITWIGNPESR------FTFDLVADENVSQEQMF 151

  Fly    66 DEMCYSLVESTIEGYNGTIFAYGQTGCGKTHTMQGD-----ENFSNSTGIIPKCFDHIFERISMT 125
            ......:||:.:.|||..:|||||||.||||||.||     ...|.:.|:.|:.|:::|.||...
plant   152 KVAGVPMVENVVAGYNSCMFAYGQTGSGKTHTMLGDIEGGTRRHSVNCGMTPRVFEYLFSRIQKE 216

  Fly   126 TNVR------YLALVTYLEIYNERIRDLLNKNENTNVINHFLKELPGIGVSVPTLTTQPVVNANQ 184
            ..||      :....::||||||:|.|||:.:.    .|..|:|....|:.|..|....|.:|..
plant   217 KEVRKEEKLHFTCRCSFLEIYNEQILDLLDPSS----YNLQLREDHKKGIHVENLKEIEVSSARD 277

  Fly   185 CYDWLHFGNKNRVTAATLMNKNSSRSHTIFTITLEQSPFLNSIGSDAFGGICRGKLSLVDLAGSE 249
            ....|..|..||..|||.||:.|||||::||..:|.......:....|     .:|:||||||||
plant   278 VIQQLMQGAANRKVAATNMNRASSRSHSVFTCIIESKWVSQGVTHHRF-----ARLNLVDLAGSE 337

  Fly   250 RQRKTGAQGDRLKEASQINLSLSALGNVISSLV---DGKAKHVPFRDSKLTRLLQDSLGGNTKTL 311
            ||:.:||:|:|||||:.||.|||.||.||.:||   :||:.|||:||||||.|||||||||:||:
plant   338 RQKSSGAEGERLKEATNINKSLSTLGLVIMNLVSVSNGKSVHVPYRDSKLTFLLQDSLGGNSKTI 402

  Fly   312 MISCISPTDIHYDETISTLRYASRAKNISNKPKINEDPKDARLRQYQNEILYLKRMLQESQQIIN 376
            :|:.|||:.....||:|||::|.|||.|.|...:|||.        ..:::.::..:|:.::   
plant   403 IIANISPSSSCSLETLSTLKFAQRAKLIKNNAIVNEDA--------SGDVIAMRLQIQQLKK--- 456

  Fly   377 KNNDPNKIIKSPLKIIQHTNMNSTKNVQIIDLGRNCKAS-----FKTNNSILTKPNFPLIQSKEE 436
                         ::.:...|....|..:..:...|.||     :...|...|    ||...|. 
plant   457 -------------EVTRLRGMGGVDNQDMDTISMGCPASPMSLKWDGFNGSFT----PLTTHKR- 503

  Fly   437 VQLQARSRIDLIKRSLIGGERIHDFELKEKHMA-RKYAAQRHLSAIAIALSRVKCEDRDLLQGHY 500
                 .|::...:.:|:|..|    ..:||.:| :...|:...|        :|.|.:       
plant   504 -----MSKVKDYEVALVGAFR----REREKDVALQALTAENEAS--------MKLEKK------- 544

  Fly   501 ATITQEIDIKNDYIRKCKEKIKMLEMEVSDL----------NSEFQLDREDYLDEIRNLGRQVKF 555
                     :.|.||..|..:|:.:..:..|          .:..|.::.|.:.||..|..||..
plant   545 ---------REDEIRGLKMMLKLRDSAIKSLQGVTSGKIPVEAHLQKEKGDLMKEIEVLRAQVDR 600

  Fly   556 HQQLF---------------LKFSSNPGKFDRNWTPDTILQNSLWNDDLKM-----WRI-PESDL 599
            :|::.               ||.....|:.|       ||...:.....|:     |:: .|||.
plant   601 NQEVTKFATENLRLKEEIRRLKSQGEEGERD-------ILNQQIQALQAKLLEALDWKLMHESDS 658

  Fly   600 IKLPPATQKSGLHCIHPLVIHSENQHNNQNEIVVGEKVSISNI 642
            ..:......|.:.|            :|||:    |...:|:|
plant   659 SMVKEDGNISNMFC------------SNQNQ----ESKKLSSI 685

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Kif3CNP_651939.4 Motor_domain 3..339 CDD:277568 147/351 (42%)
Kinesin 10..339 CDD:278646 145/345 (42%)
AT3G44050NP_189991.2 Motor_domain 92..439 CDD:354959 150/360 (42%)
Smc 521..1260 CDD:224117 40/212 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG4280
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
32.770

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