DRSC/TRiP Functional Genomics Resources

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Protein Alignment Kif3C and AT3G10310

DIOPT Version :10

Sequence 1:NP_651939.4 Gene:Kif3C / 43820 FlyBaseID:FBgn0039925 Length:649 Species:Drosophila melanogaster
Sequence 2:NP_001325950.1 Gene:AT3G10310 / 820193 AraportID:AT3G10310 Length:969 Species:Arabidopsis thaliana


Alignment Length:515 Identity:167/515 - (32%)
Similarity:252/515 - (48%) Gaps:81/515 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 NIKVVVRCRPMNQTEKERNCQNIVEI--NEFAVSVTNPSARISQQKK-FIFDSVYNMKTDTEVIY 65
            ||:|..|.||:..:|.:    .:::.  .:.::.|.:||......:| |.|:.|:......:.::
plant   363 NIRVYCRVRPIFNSEMD----GVIDYIGKDGSLFVLDPSKPYKDARKTFQFNQVFGPTATQDDVF 423

  Fly    66 DEMCYSLVESTIEGYNGTIFAYGQTGCGKTHTMQGDENFS-NSTGIIPKCFDHIF----ERISMT 125
            .| ...|:.|.::|||..||||||||.|||:||.|....| ...||.......:|    .|..|.
plant   424 RE-TQPLIRSVMDGYNVCIFAYGQTGSGKTYTMSGPPGRSATEMGINYLALSDLFLICDRRKDMM 487

  Fly   126 TNVRYLALVTYLEIYNERIRDLLNKNENTNVINHFLKELPGIGVSVPTLTTQPVVNANQCYDWLH 190
            |...|:.:|   |||||::||||.:|.:...::.........|:|:|..|...|.:.......:.
plant   488 TYEIYVQMV---EIYNEQVRDLLAENSSCTRLDIRTCSSDDDGLSLPDATMHSVNSTKDVLQLME 549

  Fly   191 FGNKNRVTAATLMNKNSSRSHTIFTITLEQSPFLNSIGSDAFGGICRGKLSLVDLAGSERQRKTG 255
            .|..||..::|.||..|||||:||.:.:.        |.|..||..|..|.|||||||||..|:.
plant   550 AGEVNRAVSSTSMNNRSSRSHSIFMVHVR--------GKDTSGGTLRSCLHLVDLAGSERVDKSE 606

  Fly   256 AQGDRLKEASQINLSLSALGNVISSLVDGKAKHVPFRDSKLTRLLQDSLGGNTKTLMISCISPTD 320
            ..|||||||..||.|||.||:|||:|.. |..|:|:|:||||.||||||||..||||.:.:||.:
plant   607 VTGDRLKEAQYINKSLSCLGDVISALAQ-KNSHIPYRNSKLTLLLQDSLGGQAKTLMFAHLSPEE 670

  Fly   321 IHYDETISTLRYASRAKNISNKPKINEDPKDARLRQYQNEILYLKRMLQESQQII-----NKNND 380
            ..:.||||||::|.|...:        :...||..:...|:::||..::..::.:     |..::
plant   671 DSFGETISTLKFAQRVSTV--------ELGAARAHKETREVMHLKEQIENLKRALGTEEWNNVSN 727

  Fly   381 PNKIIKSP--------------LKIIQHTNMNSTK----------------NVQIIDL--GRNCK 413
            .:|.||||              |:.:...|.:|||                ..||:.|  ..:||
plant   728 GSKEIKSPFSRPIATTERTPPRLRRLSIENCSSTKANLEDRRGIKSPLASRRAQILSLEGPMSCK 792

  Fly   414 --ASFKTNNSI----LTKPNFPLIQ-SKEEVQLQARS---RIDLIKRSLIGGERIHDFEL 463
              .:.|.:.::    |..|..||.. ....|::..|:   ::.|::..:.|..| :|.::
plant   793 NEENGKGDPTMEVHQLKNPRSPLSSYQNRAVKVDGRTSIPQLQLLQTPVKGASR-NDIQM 851

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Kif3CNP_651939.4 Motor_domain 3..339 CDD:473979 135/342 (39%)
AT3G10310NP_001325950.1 CH_AtKIN14-like 24..137 CDD:409052
Motor_domain 361..691 CDD:473979 135/352 (38%)
Blue background indicates that the domain is not in the aligned region.

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