DRSC/TRiP Functional Genomics Resources

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Protein Alignment Kif3C and si:dkey-26i13.8

DIOPT Version :9

Sequence 1:NP_651939.4 Gene:Kif3C / 43820 FlyBaseID:FBgn0039925 Length:649 Species:Drosophila melanogaster
Sequence 2:XP_001337836.4 Gene:si:dkey-26i13.8 / 797363 ZFINID:ZDB-GENE-090312-134 Length:991 Species:Danio rerio


Alignment Length:599 Identity:188/599 - (31%)
Similarity:295/599 - (49%) Gaps:85/599 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSENIKVVVRCRPMNQTEKERNCQNIV-EINEFAVSVTNP--------SARISQQKKFIFDSVYN 56
            |...:.|.:|.||:|:.|.|.....:. :|:...|.:.:|        .|..|::|.::||..::
Zfish     9 MDHQLTVALRIRPLNEAEIEEGATIVAHKIDNQMVVLMDPCEDSDNVLRAHRSREKTYMFDLAFD 73

  Fly    57 MKTDTEVIYDEMCYSLVESTIEGYNGTIFAYGQTGCGKTHTMQGDENFSNSTGIIPKCFDHIFER 121
            .....|.:|.....:|::..|.|||.|:||||.||.||||||.|   ..:..||..:..:.:|..
Zfish    74 YTATQEDVYVATTKNLIDGVIAGYNATVFAYGPTGAGKTHTMLG---LDSEPGIYIRTLNDLFRA 135

  Fly   122 I-SMTTNVRYLALVTYLEIYNERIRDLLNKNENTNVINHFLKELPGIG---VSVPTLTTQPVVNA 182
            | ..|.::.....::|:|||||.||||||.:..      :| ||...|   :.:..:|.....||
Zfish   136 IEDSTEDLDCSVYMSYIEIYNEMIRDLLNPSSG------YL-ELREDGKGEIRIAGITEFSTCNA 193

  Fly   183 NQCYDWLHFGNKNRVTAATLMNKNSSRSHTIFTITLEQSPFLNSIGSDAFGGICRGKLSLVDLAG 247
            .:....|..|||.|...:|..||.|||||.|..:|::|...:..|..:    :..|||.:|||||
Zfish   194 KEIMALLTKGNKQRTQESTAANKTSSRSHAILQVTVKQKSRVKDINEE----VRVGKLFMVDLAG 254

  Fly   248 SERQRKTGAQGDRLKEASQINLSLSALGNVISSLVD--GK-AKHVPFRDSKLTRLLQDSLGGNTK 309
            :||..:|..:|.|:||.:.||.||.||.|.|::|.:  || |:.|.:|||||||||:|:||||::
Zfish   255 TERASQTQNRGKRMKEGAHINRSLLALANCINALSEKGGKGAQFVNYRDSKLTRLLKDALGGNSR 319

  Fly   310 TLMISCISPTDIHYDETISTLRYASRAKNISNKPKINEDPKDARLRQYQNEILYLKRMLQESQ-Q 373
            |:||:.|||...:::|:.:||.||.:||||..|.|.|.......|.||...|..|:..::..: :
Zfish   320 TVMITHISPASSNFEESRNTLVYADKAKNIRTKVKRNLMNVSYHLAQYTRIIADLRSEIERLRAK 384

  Fly   374 IINKNNDPNKIIKSPLKIIQHTNMNSTKNVQIIDLGRNCKASFKTNNSILTKPNFPLIQSKEEVQ 438
            |..::.|..|..|:.::.||       ..||....|                 ...|:|  |::.
Zfish   385 IDQQSQDQLKGEKADIRNIQ-------AEVQQYSHG-----------------EMALLQ--EQLL 423

  Fly   439 LQARSRIDLIKRSLIGGERIHDFELKEKHMARKYAAQRHLSAIA-----IALSRVKCEDRDLLQG 498
            ...|.::: |:|||:        ||:..:|.......|||..|:     .|.:|   .::|.|.|
Zfish   424 SAFREQME-IRRSLM--------ELENCNMELHIDTSRHLLTISDWERDRARAR---REKDELSG 476

  Fly   499 HYATITQEIDIKN-----DYIRKCKEKIKMLEMEVSDLNSEFQLDREDYLDE-IRNLGRQVKFHQ 557
            ......:|.:.::     .|:...:|:|..|   :::.....:|.||  |:| :.|:..:....:
Zfish   477 QKKHTDKEEEQESMPEEPQYVTAAREEIGPL---LAEQRKTMELKRE--LEEKLLNMKLKSSKIE 536

  Fly   558 QLFLKFSSNPGKFD 571
            :|..|..||..:.|
Zfish   537 ELLPKRISNTEQRD 550

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Kif3CNP_651939.4 Motor_domain 3..339 CDD:277568 132/351 (38%)
Kinesin 10..339 CDD:278646 131/344 (38%)
si:dkey-26i13.8XP_001337836.4 KISc 12..356 CDD:214526 136/357 (38%)
KISc_KIP3_like 12..349 CDD:276821 132/350 (38%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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