DRSC/TRiP Functional Genomics Resources

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Protein Alignment Kif3C and Kif26a

DIOPT Version :9

Sequence 1:NP_651939.4 Gene:Kif3C / 43820 FlyBaseID:FBgn0039925 Length:649 Species:Drosophila melanogaster
Sequence 2:XP_006516225.1 Gene:Kif26a / 668303 MGIID:2447072 Length:1913 Species:Mus musculus


Alignment Length:370 Identity:99/370 - (26%)
Similarity:175/370 - (47%) Gaps:45/370 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 IKVVVRCRPMNQTEKERNCQNIVEINEFAVSVT----------------NPSARISQQKKFIFDS 53
            :||::|..|....::.....:.::::.....||                .|:|.:  .|.|.||:
Mouse   397 VKVMLRIWPAQGVQRSAESTSFLKVDSRKKQVTLYDPAAGPPGCAGLRHAPTAPV--PKMFAFDA 459

  Fly    54 VYNMKTDTEVIYDEMCYSLVESTIEGYNGTIFAYGQTGCGKTHTMQGDENFSNSTGIIPKCFDHI 118
            ::...::...:.......:::|.:.|.:|.||::|....||::||.|.::...|.||:|.....:
Mouse   460 IFPQDSEQAEVCSGTVADVLQSVVSGADGCIFSFGHMSLGKSYTMIGKDSSPQSLGIVPCAISWL 524

  Fly   119 F-------ERISMTTNVRYLALVTYLEI--YNERIRDLL-----NKNENTNVINHFLKELPGIGV 169
            |       ||:....::|    |:.:|:  :::.:||||     ...::|.....:|:|.|..|.
Mouse   525 FRLIDERKERLGTRFSIR----VSAVEVCGHDQSLRDLLAEVASGSLQDTQSPGVYLREDPVCGT 585

  Fly   170 SVPTLTTQPVVNANQCYDWLHFGNKNRVTAATLMNKNSSR-SHTIFTITLEQSPFLNSIGSDAFG 233
            .:..........|.:...:|......|.|:.....:.:.| ||.:||:.:.|.. :...|.....
Mouse   586 QLQNQNELRAPTAEKAAFYLDAALAARSTSRAGCGEEARRSSHMLFTLHVYQYR-VEKCGQGGMS 649

  Fly   234 GICRGKLSLVDLAGSERQRKTGAQGDRLKEASQINLSLSALGNVISSLVDGKAKHVPFRDSKLTR 298
            | .|.:|.|:||...:.....|.:.    ....:.|||||||:||.:||:| |||||:||.:||.
Mouse   650 G-GRSRLHLIDLGSCDAAVGRGGEA----SGGPLCLSLSALGSVILALVNG-AKHVPYRDHRLTM 708

  Fly   299 LLQDSLG-GNTKTLMISCISPTDIHYDETISTLRYASRAKNISNK 342
            ||::||. .|.:|.||:.||.:..|:.||:||::.|:|...:..|
Mouse   709 LLRESLATTNCRTTMIAHISDSPAHHAETLSTVQLAARIHRLRRK 753

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Kif3CNP_651939.4 Motor_domain 3..339 CDD:277568 98/365 (27%)
Kinesin 10..339 CDD:278646 96/360 (27%)
Kif26aXP_006516225.1 KISc 396..748 CDD:276812 98/363 (27%)
PRK07764 <869..1301 CDD:236090
PHA03247 <1154..1647 CDD:223021
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG4280
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.900

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