DRSC/TRiP Functional Genomics Resources

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Protein Alignment Kif3C and kif11

DIOPT Version :9

Sequence 1:NP_651939.4 Gene:Kif3C / 43820 FlyBaseID:FBgn0039925 Length:649 Species:Drosophila melanogaster
Sequence 2:NP_001016116.2 Gene:kif11 / 548870 XenbaseID:XB-GENE-978999 Length:1067 Species:Xenopus tropicalis


Alignment Length:698 Identity:208/698 - (29%)
Similarity:332/698 - (47%) Gaps:109/698 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 ENIKVVVRCRPMNQTEKERNCQNIVEIN----EFAVSVTNPSARISQQKKFIFDSVYNMKTDTEV 63
            :||:|||||||.||.|::.:..:::|.:    |..|.....:.::. :|.:.||.|:........
 Frog    17 KNIQVVVRCRPFNQLERKASSHSVLECDAPRKEVCVRTGGINDKLG-KKTYTFDMVFGPAAKQID 80

  Fly    64 IYDEMCYSLVESTIEGYNGTIFAYGQTGCGKTHTMQG----DENFS----NSTGIIPKCFDHIFE 120
            :|..:...:::..|.|||.|:|||||||.|||.||:|    ||.|:    ...||||:....|||
 Frog    81 VYRSVVCPILDEVIMGYNCTVFAYGQTGTGKTFTMEGERSADEEFTWEQDPLAGIIPRTLHQIFE 145

  Fly   121 RISMTTNVRYLALVTYLEIYNERIRDLLNKNENTNV-INHFLKELPGIGVSVPTLTTQPVVNANQ 184
            ::| .....:...|:.||||||.:.|||:.:.:... :..|.......||.:..|....|.|.::
 Frog   146 KLS-ENGTEFSVKVSLLEIYNEELFDLLSPSPDVGERLQMFDDPRNKRGVIIKGLEEVSVHNKDE 209

  Fly   185 CYDWLHFGNKNRVTAATLMNKNSSRSHTIFTITLEQSPFLNSIGSDAFGGICRGKLSLVDLAGSE 249
            .|..|..|...|.||:||||..|||||::|::|:....  .::..:....|  |||:||||||||
 Frog   210 VYHILERGAARRKTASTLMNAYSSRSHSVFSVTIHMKE--TTVDGEELVKI--GKLNLVDLAGSE 270

  Fly   250 RQRKTGAQGDRLKEASQINLSLSALGNVISSLVDGKAKHVPFRDSKLTRLLQDSLGGNTKTLMIS 314
            ...::||...|.:||..||.||..||.||::||: :|.|:|:|:|||||:|||||||.|||.:|:
 Frog   271 NIGRSGAVDKRAREAGNINQSLLTLGRVITALVE-RAPHIPYRESKLTRILQDSLGGRTKTSIIA 334

  Fly   315 CISPTDIHYDETISTLRYASRAKNISNKPKINED-PKDARLRQYQNEILYLKRMLQESQQ----- 373
            .:||..|:.:||:|||.||:|||||.|||::|:. .|.|.:::|..||..|||.|..:::     
 Frog   335 TVSPASINLEETVSTLEYANRAKNIMNKPEVNQKLTKRALIKEYTEEIERLKRDLATAREKNGVY 399

  Fly   374 IINKNND--PNKIIKSPLKIIQHTNMNSTKNVQIIDLG----------RNCKASFKTNNSILTKP 426
            :.|:|.:  ..|::.....|.::|...:....:|..:.          ..|....:.....|.:.
 Frog   400 LSNENYEQLQGKVLSQEEIITEYTEKITAMEEEIKRINELFAENKKELEECTTILQCKEKELEET 464

  Fly   427 NFPLIQSKEEVQLQA--RSRIDLIKRSLIGGERIHDFELKEKHMARKYAAQRHLSAIAIALSRVK 489
            ...|.:|||::..:|  .:.::..::.|.|        ...|.:.......:.:|.:...|.|.:
 Frog   465 QKNLHESKEQLAQEAFVVTALETTEKKLHG--------TANKLLTTVRETSKDVSGLHAKLDRKR 521

  Fly   490 CEDRDLLQGHYATITQEIDIKNDYIRKCKEKIKMLEMEVSDLNSEFQLDREDYLDEIRN-----L 549
            ..|:...|.|           .::..:..::..::|..|    .|:.:.::..||...|     |
 Frog   522 AVDQHNTQVH-----------ENFAEQMNKRFSVIERSV----DEYSVKQQGMLDFYTNSIDDLL 571

  Fly   550 GRQ---------------VKFHQQLFLKFSSNPGKFDRNWTPDTILQNSLWNDDLKMWRIPESDL 599
            |..               ....:.:..|.|.         :.|.||:....:...|      .||
 Frog   572 GASSAALSVTATAVAKSFTSVQETVSEKVSH---------SVDEILKQETLSSQAK------DDL 621

  Fly   600 IKLPPATQKSGLH-----CIHPLV-----IHSENQHNNQNEIVVGEKV 637
            .|| .|..::||.     .:.|:|     ::|...|..||...|.:|:
 Frog   622 QKL-MAAHRTGLEQALRTDLLPVVTAVLNLNSHLSHCLQNFQAVADKI 668

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Kif3CNP_651939.4 Motor_domain 3..339 CDD:277568 142/348 (41%)
Kinesin 10..339 CDD:278646 137/341 (40%)
kif11NP_001016116.2 KISc_BimC_Eg5 16..368 CDD:276815 148/357 (41%)
KISc 18..366 CDD:214526 147/354 (42%)
DUF342 <325..446 CDD:302792 40/120 (33%)
Microtub_bind 927..1066 CDD:290642
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1048..1067
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.910

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