DRSC/TRiP Functional Genomics Resources

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Protein Alignment Kif3C and KIF1A

DIOPT Version :10

Sequence 1:NP_651939.4 Gene:Kif3C / 43820 FlyBaseID:FBgn0039925 Length:649 Species:Drosophila melanogaster
Sequence 2:XP_047300774.1 Gene:KIF1A / 547 HGNCID:888 Length:1825 Species:Homo sapiens


Alignment Length:781 Identity:219/781 - (28%)
Similarity:330/781 - (42%) Gaps:219/781 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 NIKVVVRCRPMNQTEKERNCQNIVEINEFAVSVTNPSARISQQKKFIFDSVYNMKTDTE------ 62
            ::||.||.||.|..|..|:.:.|::::....::.||.......|.|.||..|...|..|      
Human     5 SVKVAVRVRPFNSREMSRDSKCIIQMSGSTTTIVNPKQPKETPKSFSFDYSYWSHTSPEDINYAS 69

  Fly    63 --VIYDEMCYSLVESTIEGYNGTIFAYGQTGCGKTHTMQGDENFSNSTGIIPKCFDHIFERISMT 125
              .:|.::...:::...||||..||||||||.||::||.|.:. .:..||||:..:.:|.||:.|
Human    70 QKQVYRDIGEEMLQHAFEGYNVCIFAYGQTGAGKSYTMMGKQE-KDQQGIIPQLCEDLFSRINDT 133

  Fly   126 T--NVRYLALVTYLEIYNERIRDLLN-KNENTNVINHFLKELPGIGVSVPTLTTQPVVNANQCYD 187
            |  |:.|...|:|:|||.||:||||| ||:.    |..::|.|.:|..|..|:...|.:.|...|
Human   134 TNDNMSYSVEVSYMEIYCERVRDLLNPKNKG----NLRVREHPLLGPYVEDLSKLAVTSYNDIQD 194

  Fly   188 WLHFGNKNRVTAATLMNKNSSRSHTIFTITLEQSPFLNSIGSDAFGGICR---GKLSLVDLAGSE 249
            .:..|||.|..|||.||:.|||||.:|.|...|.      ..||...|..   .|:|||||||||
Human   195 LMDSGNKARTVAATNMNETSSRSHAVFNIIFTQK------RHDAETNITTEKVSKISLVDLAGSE 253

  Fly   250 RQRKTGAQGDRLKEASQINLSLSALGNVISSLVD-----------GKAKHVPFRDSKLTRLLQDS 303
            |...|||:|.||||.:.||.||:.||.|||:|.:           .|...:|:|||.||.||:::
Human   254 RADSTGAKGTRLKEGANINKSLTTLGKVISALAEMDSGPNKNKKKKKTDFIPYRDSVLTWLLREN 318

  Fly   304 LGGNTKTLMISCISPTDIHYDETISTLRYASRAKNISNKPKINEDPKDARLRQYQNEILYLKRML 368
            ||||::|.|::.:||.||:||||:||||||.|||.|.....|||||.:..:|:.::|:..|:.:|
Human   319 LGGNSRTAMVAALSPADINYDETLSTLRYADRAKQIRCNAVINEDPNNKLIRELKDEVTRLRDLL 383

  Fly   369 QESQQIINKNNDPNKIIKSPLKI--IQHTNMN------------STKNVQIIDLGRNCKAS---- 415
            .  .|.:....|.|.:...|..:  :::.|:|            ||....::.:..:...|    
Human   384 Y--AQGLGDITDTNTVPGGPKYVSDLENNNLNRGGTVNEAPDPLSTVTNALVGMSPSSSLSALSS 446

  Fly   416 ------------------------FKTNNSILTKPN----------------------------- 427
                                    .|....|:.:.|                             
Human   447 RAASVSSLHERILFAPGSEEAIERLKETEKIIAELNETWEEKLRRTEAIRMEREALLAEMGVAMR 511

  Fly   428 -------------FPLIQSKEEVQLQARSRIDLIKRSL--IG---GERIHDFEL-----KEKHM- 468
                         .|.:.:..|..|.:...:..||..:  :|   |||..|..|     ||:|. 
Human   512 EDGGTLGVFSPKKTPHLVNLNEDPLMSECLLYYIKDGITRVGREDGERRQDIVLSGHFIKEEHCV 576

  Fly   469 --------------------ARKYAAQRHLSAIAIALS-------------------------RV 488
                                |..|...:.::..:|..|                         |.
Human   577 FRSDSRGGSEAVVTLEPCEGADTYVNGKKVTEPSILRSGNRIIMGKSHVFRFNHPEQARQERERT 641

  Fly   489 KCED------------RDLLQGHYATITQEI-----DIKNDYIRKCKEKIKMLEMEVSDLNSEF- 535
            .|.:            |:||:.....:.||:     ::::.|.|:.:|...:||.:..|..|:. 
Human   642 PCAETPAEPVDWAFAQRELLEKQGIDMKQEMEQRLQELEDQYRREREEATYLLEQQRLDYESKLE 706

  Fly   536 ----QLD----------REDYLDEIRNLGRQVKFHQQLFLKFSSNPGKFDRNWTPDTILQNSLWN 586
                |:|          .|:..||::...|:.:.....|.|:         .|...|.|::.||.
Human   707 ALQKQMDSRYYPEVNEEEEEPEDEVQWTERECELALWAFRKW---------KWYQFTSLRDLLWG 762

  Fly   587 D 587
            :
Human   763 N 763

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Kif3CNP_651939.4 Motor_domain 3..339 CDD:473979 152/359 (42%)
KIF1AXP_047300774.1 KISc_KIF1A_KIF1B 4..361 CDD:276816 153/366 (42%)
Kinesin_assoc 358..549 CDD:465047 26/192 (14%)
FHA_KIF1A 525..639 CDD:438778 18/113 (16%)
ERM_helical 658..>711 CDD:466641 12/52 (23%)
KIF1B 839..886 CDD:463574
DUF3694 1275..1431 CDD:463599
PH_KIFIA_KIFIB 1706..1808 CDD:269939
Blue background indicates that the domain is not in the aligned region.

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