DRSC/TRiP Functional Genomics Resources

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Protein Alignment Kif3C and kif4

DIOPT Version :9

Sequence 1:NP_651939.4 Gene:Kif3C / 43820 FlyBaseID:FBgn0039925 Length:649 Species:Drosophila melanogaster
Sequence 2:NP_957117.1 Gene:kif4 / 393796 ZFINID:ZDB-GENE-040426-1545 Length:1248 Species:Danio rerio


Alignment Length:696 Identity:214/696 - (30%)
Similarity:336/696 - (48%) Gaps:135/696 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 IKVVVRCRPMNQTEKERNCQ---NIVEINEFAVSVTNPSARISQQKKFIFDSVYNMKTDTEVIYD 66
            ::|.:||||:...|....||   |.|.        :.|...:...|.|.||.|::..|:.|.:::
Zfish    11 VRVALRCRPLVPKEINEGCQCCLNFVP--------SEPQVIVGNDKAFTFDYVFDPTTEQEEVFN 67

  Fly    67 EMCYSLVESTIEGYNGTIFAYGQTGCGKTHTMQG----DENFSNSTGIIPKCFDHIFERISMTTN 127
            .....|:....:||:.|:.||||||.|||.:|.|    ::....:.|:||:....||:..:..|:
Zfish    68 TAVSPLLSGLFKGYHATVLAYGQTGSGKTFSMGGTYTSEQENEPTVGVIPRVIRRIFQEKAKRTD 132

  Fly   128 VRYLALVTYLEIYNERIRDLLNKNENTNVINHFLKELPGIGVSVPTLTTQPVVNANQCYDWLHFG 192
            ..::..|:|||||||.|.|||..:::..||:  ::|.|..|:.:..||.:.|:||::....|..|
Zfish   133 CEFVLAVSYLEIYNEEILDLLCTSKDKPVIS--IREDPKDGIKIVGLTERDVLNAHEMVCCLEMG 195

  Fly   193 NKNRVTAATLMNKNSSRSHTIFTITLEQSPFLNSIGSDAFGGICRGKLSLVDLAGSERQRKTGAQ 257
            |..|...:|.||..|||||.||||:|||.  .|...:|    :...||.||||||||||:||.|:
Zfish   196 NSARTVGSTAMNAASSRSHAIFTISLEQR--RNGDKTD----VMVSKLHLVDLAGSERQKKTKAE 254

  Fly   258 GDRLKEASQINLSLSALGNVISSLVD--GKAKHVPFRDSKLTRLLQDSLGGNTKTLMISCISPTD 320
            ||||||...||..|.:||||||:|.|  .|...||:||||||||||||||||:.||||:|:||.|
Zfish   255 GDRLKEGISINRGLLSLGNVISALGDESKKGSFVPYRDSKLTRLLQDSLGGNSHTLMIACVSPAD 319

  Fly   321 IHYDETISTLRYASRAKNISNKPKINEDPKDARLRQYQNEILYLKRML-------------QESQ 372
            .:.:|||:|||||.||:.|.|||.:|.||:.|.:::.:.::..|:.||             .|..
Zfish   320 SNIEETINTLRYADRARKIKNKPVLNVDPRAAEMKRLKQQVQELQVMLLHARGGVAPVLSGSEPA 384

  Fly   373 QIINKNNDPNKIIKSPLKIIQHTNMNSTKNVQIIDLGRNCKASFKTNNSILTKPNFPLIQSK-EE 436
            :.::|..:.|:.::         :.||..:.::.:......|.|:  ..::.:.....:||| :|
Zfish   385 ENVSKVLEQNRSLQ---------DQNSKLSRELSESVGQTAAMFE--RMLMMEQTNEKLQSKLDE 438

  Fly   437 VQLQARSRIDLIKRSLIGGERIHDFELKEK------------HMARKYA---------------- 473
            ::..|..::||  :.|:  |.:.|.||:|.            .:.|:.|                
Zfish   439 LRQHAACKVDL--QRLV--ETLEDQELRENVEVIQNLQQIILELQRESAGIAATIDAITSGNASS 499

  Fly   474 --AQRHLSAIAIALSRVKCEDRD------------------LLQGHYA----TITQEIDIKNDYI 514
              |..|.|..........|..:|                  |.|...:    .:.:.:.:|..::
Zfish   500 LEAAAHCSPSTAGAQAEICPGQDGAVPEAKDSPEAYTAQHALRQAQMSKELIELNKVLALKEAFV 564

  Fly   515 RK-C-------------KEKIKMLEMEVSDLNSEFQLDREDYLDEIRNLGR---QVKFHQQLFLK 562
            :| |             :|.|:.|:..|..|    |.::||.:..:::..:   |.|..:|...:
Zfish   565 KKMCQNDSHLEPMQTQYQESIQSLQAAVGSL----QKEKEDLVQTLQSAKKDTNQAKLSEQRRKR 625

  Fly   563 FSSNPGKFDRNWTPDTILQNSLWNDDLKMWRIPESDLIKLPPATQK 608
            .....|:.       |.|:..| .|..|:.::.||.:..:....|:
Zfish   626 LQELEGQM-------TELKKKL-QDQSKLLKLKESSVRNVAKLNQE 663

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Kif3CNP_651939.4 Motor_domain 3..339 CDD:277568 151/342 (44%)
Kinesin 10..339 CDD:278646 150/337 (45%)
kif4NP_957117.1 KISc_KIF4 9..339 CDD:276823 151/343 (44%)
KISc 10..345 CDD:214526 155/349 (44%)
BST2 568..644 CDD:293321 17/87 (20%)
DUF3435 <938..1082 CDD:288746
TCR 1100..1136 CDD:281618
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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