DRSC/TRiP Functional Genomics Resources

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Protein Alignment Kif3C and Klp68D

DIOPT Version :9

Sequence 1:NP_651939.4 Gene:Kif3C / 43820 FlyBaseID:FBgn0039925 Length:649 Species:Drosophila melanogaster
Sequence 2:NP_001261726.1 Gene:Klp68D / 39332 FlyBaseID:FBgn0004381 Length:784 Species:Drosophila melanogaster


Alignment Length:633 Identity:235/633 - (37%)
Similarity:346/633 - (54%) Gaps:64/633 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 SENIKVVVRCRPMNQTEKERNCQNIVEI--NEFAVSVTN-PSARISQQKKFIFDSVYNMKTDTEV 63
            :|.::||||||||:..|:......:|.:  |...|.:.| ......|:|.|.:|:.|:.......
  Fly    17 NECVQVVVRCRPMSNRERSERSPEVVNVYPNRGVVELQNVVDGNKEQRKVFTYDAAYDASATQTT 81

  Fly    64 IYDEMCYSLVESTIEGYNGTIFAYGQTGCGKTHTMQGDENFSNSTGIIPKCFDHIFERISMTTNV 128
            :|.|:.:.||.|.:||:||.||||||||.|||.||:|........||||:.|:.|:..|:.|.|.
  Fly    82 LYHEVVFPLVSSVLEGFNGCIFAYGQTGTGKTFTMEGVRGNDELMGIIPRTFEQIWLHINRTENF 146

  Fly   129 RYLALVTYLEIYNERIRDLLNKNENTNVINHFLKELPGIGVSVPTLTTQPVVNANQCYDW---LH 190
            ::|..|:|||||.|.:||||..|.     .|......|.||.||.|   ..:|.....|.   :.
  Fly   147 QFLVDVSYLEIYMEELRDLLKPNS-----KHLEVRERGSGVYVPNL---HAINCKSVEDMIKVMQ 203

  Fly   191 FGNKNRVTAATLMNKNSSRSHTIFTITLEQ-SPFLNSIGSDAFGGICRGKLSLVDLAGSERQRKT 254
            .|||||....|.||::|||||.||.|.:|. ....|:|..        |||:|:||||||||.||
  Fly   204 VGNKNRTVGFTNMNEHSSRSHAIFMIKIEMCDTETNTIKV--------GKLNLIDLAGSERQSKT 260

  Fly   255 GAQGDRLKEASQINLSLSALGNVISSLVDGKAKHVPFRDSKLTRLLQDSLGGNTKTLMISCISPT 319
            ||..:||||||:|||:||:||||||:|.: .:.|||:||||||||||||||||:||:||:.|.|:
  Fly   261 GASAERLKEASKINLALSSLGNVISALAE-SSPHVPYRDSKLTRLLQDSLGGNSKTIMIANIGPS 324

  Fly   320 DIHYDETISTLRYASRAKNISNKPKINEDPKDARLRQYQNEILYLKRML--QESQQIINKNNDPN 382
            :.:|:||::|||||||||:|.|:|..||||:||:|::||.||..|||::  |:.|:...:.....
  Fly   325 NYNYNETLTTLRYASRAKSIQNQPIKNEDPQDAKLKEYQEEIERLKRLIGPQQQQRSEKQVTAKK 389

  Fly   383 KIIKSPLKIIQHTNMNSTKNVQIIDL---------GRNCKASFKTNNSILTKPNFPLIQSKEEVQ 438
            :.:|.|.|......|:.:..|..|:.         |...: |.|.|.:.:.|.|..|.:.:.|..
  Fly   390 QRVKKPKKETVTKEMSDSLQVSTIEQPVEDDSDPEGAESE-SDKENEAEVAKSNEELERERVENS 453

  Fly   439 LQARSRIDLIKRSLIGGERIHD------FELKEKHMARKYAAQRHLSAIAIALSRVKCEDRDL-L 496
            ..|....:|..:.:.||:.:.|      .||::|.:.   .|:|....|.|.......|:..| :
  Fly   454 KLAAKLAELEGQLVRGGKNLLDTYSERQIELEKKLVE---IAERKKREIEIQQQLELQEETTLEI 515

  Fly   497 QGHYATITQEIDIKNDYIRKCKEKIKMLEMEVSDLNSEFQLDREDYLDEIRN-LGRQVKFHQQLF 560
            :....::.||:::|...:.||..|...|:.|::|..|:...|..: |:..:| |.:::|  :||.
  Fly   516 RERNVSLEQEVELKKRKLSKCYAKYLALQQELNDCKSDHNQDLRE-LEMAQNELVKELK--RQLL 577

  Fly   561 LKFSSNPGKFDRNWTPDTILQ----NSLWNDDLKMWRIPESDLIKLPP 604
            :        .| |:.|..:.|    .:.::::.:.|:.....| ..||
  Fly   578 I--------ID-NFVPIEVKQRLYTQAKYDEEQEEWKFSSMSL-PTPP 615

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Kif3CNP_651939.4 Motor_domain 3..339 CDD:277568 163/342 (48%)
Kinesin 10..339 CDD:278646 159/335 (47%)
Klp68DNP_001261726.1 Motor_domain 18..344 CDD:277568 163/342 (48%)
KISc 20..351 CDD:214526 165/347 (48%)
GBP_C <479..576 CDD:303769 24/102 (24%)
coiled coil 547..558 CDD:293879 2/10 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45437715
Domainoid 1 1.000 253 1.000 Domainoid score I504
eggNOG 1 0.900 - - E2759_KOG4280
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 250 1.000 Inparanoid score I786
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D13740at7147
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24115
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
76.900

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