DRSC/TRiP Functional Genomics Resources

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Protein Alignment Kif3C and Khc-73

DIOPT Version :9

Sequence 1:NP_651939.4 Gene:Kif3C / 43820 FlyBaseID:FBgn0039925 Length:649 Species:Drosophila melanogaster
Sequence 2:NP_001261000.1 Gene:Khc-73 / 36718 FlyBaseID:FBgn0019968 Length:1957 Species:Drosophila melanogaster


Alignment Length:697 Identity:210/697 - (30%)
Similarity:315/697 - (45%) Gaps:160/697 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 SENIKVVVRCRPMNQTEKERNCQNIVEINEFAVSVTNP----SARISQQKKFIFD-SVYNMKTD- 60
            |:.|||.||.||.|:.|.|.:.:.|||:.:....:.||    .....|.|.|.|| ..|::..: 
  Fly     3 SDKIKVAVRVRPFNRREIELDTKCIVEMEKQQTILQNPPPLEKIERKQPKTFAFDHCFYSLNPED 67

  Fly    61 -----TEVIYDEMCYSLVESTIEGYNGTIFAYGQTGCGKTHTMQGDENFSNSTGIIPKCFDHIFE 120
                 .|.::|.:...::::..:|||..||||||||.||::||.|.:   .|.||||:..|.:|.
  Fly    68 ENFASQETVFDCVGRGILDNAFQGYNACIFAYGQTGSGKSYTMMGTQ---ESKGIIPRLCDQLFS 129

  Fly   121 RIS--MTTNVRYLALVTYLEIYNERIRDLLNKNENTNVINHFLKELPGIGVSVPTLTTQPVVNAN 183
            .|:  .|..:.|...|:|:|||||::.|||:...|...:.  ::|...:|..|..|:...|.:..
  Fly   130 AIANKSTPELMYKVEVSYMEIYNEKVHDLLDPKPNKQSLK--VREHNVMGPYVDGLSQLAVTSYQ 192

  Fly   184 QCYDWLHFGNKNRVTAATLMNKNSSRSHTIFTITLEQSPFLNSIGSDAFGGICRGK---LSLVDL 245
            ...:.:..|||:|..|||.||..|||||.:|::.|.|      |.:|...|:...|   :|||||
  Fly   193 DIDNLMTEGNKSRTVAATNMNAESSRSHAVFSVVLTQ------ILTDQATGVSGEKVSRMSLVDL 251

  Fly   246 AGSERQRKTGAQGDRLKEASQINLSLSALGNVISSLVD-------GKAKHVPFRDSKLTRLLQDS 303
            |||||..||||.||||||.|.||.||:.||.|||.|.|       |..|.||:|||.||.||:|:
  Fly   252 AGSERAVKTGAVGDRLKEGSNINKSLTTLGLVISKLADQSNGKKSGNDKFVPYRDSVLTWLLKDN 316

  Fly   304 LGGNTKTLMISCISPTDIHYDETISTLRYASRAKNISNKPKINEDPKDARLRQYQNEILYLKRML 368
            ||||::|:|::.|||:..:|:||:||||||.|||.|.|...:||||....:|:.::|:..|:.||
  Fly   317 LGGNSRTVMVATISPSADNYEETLSTLRYADRAKRIVNHAVVNEDPNARIIRELRHEVETLRSML 381

  Fly   369 Q---------------ESQQIINKNND--PNKIIKSPLKIIQHTNMNSTKNVQIIDLGRNCKASF 416
            :               ||:.::.:.:.  ..|::|:  :.||:....:.:.:.|         |.
  Fly   382 KHATGSPVGDVQDKLAESENLMKQISQTWEEKLVKT--ERIQNERQQALEKMGI---------SV 435

  Fly   417 KTNNSILTKPNFPLIQSKEEVQLQARSRIDLIKRSLIGGERIH----DFEL-----KEKHM---- 468
            :.:...:.|..:.|:....:..|.......|..|:||||..|.    |.:|     :.:|.    
  Fly   436 QASGIKVEKNKYYLVNLNADPSLNELLVYYLKDRTLIGGRTISGQQPDIQLSGLGIQPEHCVITI 500

  Fly   469 ------------ARKYAAQRHLSAIAIALSRVKCEDRDLLQGHYATITQEIDIKNDYIRKCKEKI 521
                        ||.:..    .:.|:..:.::..||.|...|:            :.|....|.
  Fly   501 EDSGLYMEPVQGARCFVN----GSAAVEKTPLQNGDRILWGNHH------------FFRVNSPKS 549

  Fly   522 KMLEMEVSDLNSEFQLDREDYLDEIRNLGRQVKFHQQLFLKFSSNPGKFDRNWTPDTILQNSLWN 586
            ....|..|:..:..||                                .|.|:..|.|:||.|.|
  Fly   550 NNTSMCASEPQTPAQL--------------------------------IDYNFARDEIMQNELSN 582

  Fly   587 DDLKMWRIPESDLIKLPPATQKSGLHCIHPLVIHSENQHNNQNEIVV 633
            |.                         |...:...|.||....::.:
  Fly   583 DP-------------------------IQTAIARLERQHEEDKQVAL 604

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Kif3CNP_651939.4 Motor_domain 3..339 CDD:277568 151/358 (42%)
Kinesin 10..339 CDD:278646 147/351 (42%)
Khc-73NP_001261000.1 KISc_KIF1A_KIF1B 4..359 CDD:276816 153/365 (42%)
KISc 6..359 CDD:214526 153/363 (42%)
Kinesin_assoc 356..468 CDD:292801 21/122 (17%)
FHA 446..546 CDD:238017 20/115 (17%)
KIF1B 741..786 CDD:289208
DUF3694 <1196..1252 CDD:289256
CAP_GLY 1786..1850 CDD:279625
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45437692
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24115
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.940

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