DRSC/TRiP Functional Genomics Resources

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Protein Alignment Kif3C and Klp3A

DIOPT Version :9

Sequence 1:NP_651939.4 Gene:Kif3C / 43820 FlyBaseID:FBgn0039925 Length:649 Species:Drosophila melanogaster
Sequence 2:NP_001284830.1 Gene:Klp3A / 31240 FlyBaseID:FBgn0011606 Length:1212 Species:Drosophila melanogaster


Alignment Length:755 Identity:207/755 - (27%)
Similarity:340/755 - (45%) Gaps:171/755 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 IKVVVRCRPMNQTEKERNCQNIVEINEFAVSVTNPSARISQQKKFIFDSVYNMKTDTEVIYDEMC 69
            :.|.:|.||:.|:|.:|.|:..||.:....    |...:::.:.:.::.|:::....:.:::...
  Fly     9 VAVALRVRPLVQSELDRGCRIAVERSADGA----PQVTVNRNESYTYNYVFDIDDSQKDLFETCV 69

  Fly    70 YSLVESTIEGYNGTIFAYGQTGCGKTHTMQGDEN--FSNSTGIIPKCFDHIFERIS-MTTNVRYL 131
            .:.|:..:.|||.||.||||||.|||:||....|  ..:..|:||:....||..|: |.:..|:.
  Fly    70 QAKVKKLLNGYNVTILAYGQTGSGKTYTMGTAFNGVLDDHVGVIPRAVHDIFTAIAEMQSEFRFA 134

  Fly   132 ALVTYLEIYNERIRDLL-NKNENTNVINHFLKELPGIGVSVPTLTTQPVVNANQCYDWLHFGNKN 195
            ...:::|:|.|:..||. :|..:...::  ::|:.. .:.:|.||...|.:|.|..|.|..|:..
  Fly   135 VTCSFVELYQEQFYDLFSSKTRDKATVD--IREVKN-RIIMPGLTELVVTSAQQVTDHLIRGSAG 196

  Fly   196 RVTAATLMNKNSSRSHTIFTITLEQSPFLNSIGSDAFGGICRGKLSLVDLAGSERQRKTGAQGDR 260
            |..|||.||:.|||||.|||:||..:..      |....:...:.:|||||||||..||.|.|||
  Fly   197 RAVAATAMNETSSRSHAIFTLTLVATKL------DGKQSVTTSRFNLVDLAGSERCSKTLASGDR 255

  Fly   261 LKEASQINLSLSALGNVISSLVDGKAK-HVPFRDSKLTRLLQDSLGGNTKTLMISCISPTDIHYD 324
            .||...||..|.||||||::|..|:|. ::|:|.||||||||||||||:.||||:|:||.|.:..
  Fly   256 FKEGVNINKGLLALGNVINALGSGQAAGYIPYRQSKLTRLLQDSLGGNSITLMIACVSPADYNVA 320

  Fly   325 ETISTLRYASRAKNISNKPKINEDPKDARLRQYQNEILYLK-------RM--------------- 367
            ||:||||||.||..|.|||.:|.||..|.:...::.|..|:       :|               
  Fly   321 ETLSTLRYADRALQIKNKPVVNLDPHAAEVNMLKDVIQKLRVELLSGGKMSSSLISAVGAAGLGA 385

  Fly   368 ----------------LQESQQIINKNNDPNKIIKSPL----------------------KIIQH 394
                            :|..::.:....|.|:.::..|                      |:..|
  Fly   386 IPCEESLAGSMANAAEIQRLKEQVRTLQDRNRKLQQELHQSLLDLTEKEMRAHIAEQAHDKLRSH 450

  Fly   395 TNMNSTKNVQIIDLGRNCKASFKTNNS-----------ILTKPNFPLIQSKEEVQLQA-RSRIDL 447
              ::..||    .|.:..:|.|...|:           ::.:.:..|.:::||::.|. .||..|
  Fly   451 --VSELKN----KLDQREQAQFGNENTNGDNEMRDFSLLVNRVHVELQRTQEELESQGHESRQRL 509

  Fly   448 IKRSLI-----GGERIHDF------ELKEKHMARKYAAQ-----RHL-------SAIAIALSRVK 489
            ..||..     ||:.:|:.      |...|.|  .:|.:     |.|       ..|....||:.
  Fly   510 SSRSHTEGGESGGDEVHEMLHSHSEEYTNKQM--NFAGELRNINRQLDLKQELHERIMRNFSRLD 572

  Fly   490 CEDRDL-----------LQGHYATITQEI------DIKNDYIRKCKEKIKMLEMEVSDLNSEFQL 537
            .:|.|:           |:.....:..::      ||......:.::::::||.|:|||..:...
  Fly   573 SDDEDVKLRLCNQKIDDLEAERRDLMDQLRNIKSKDISAKLAEERRKRLQLLEQEISDLRRKLIT 637

  Fly   538 D------REDYLDEIRNLGRQVKFHQQ----LFLKFSSNPGKFDRNWTPDTILQNSLWNDDLKMW 592
            .      |:...::|:||..:::..::    |.........|| |.|               ||.
  Fly   638 QANLLKIRDKEREKIQNLSTEIRTMKESKVKLIRAMRGESEKF-RQW---------------KMV 686

  Fly   593 RIPESDLIKLPPATQKSGLHCIHPLVIHSENQHNNQNEIV 632
            |  |.:|.:|....:|     :...::..:..|:.|.:::
  Fly   687 R--EKELTQLKSKDRK-----MQSEIVRQQTLHSKQRQVL 719

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Kif3CNP_651939.4 Motor_domain 3..339 CDD:277568 134/338 (40%)
Kinesin 10..339 CDD:278646 133/333 (40%)
Klp3ANP_001284830.1 KISc_KIF4 7..336 CDD:276823 134/339 (40%)
Kinesin 14..335 CDD:278646 133/333 (40%)
Smc <396..>994 CDD:224117 62/355 (17%)
FlaC 522..633 CDD:225888 22/112 (20%)
TCR 1075..1110 CDD:281618
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45437708
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.840

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