DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Kif3C and Kif19

DIOPT Version :9

Sequence 1:NP_651939.4 Gene:Kif3C / 43820 FlyBaseID:FBgn0039925 Length:649 Species:Drosophila melanogaster
Sequence 2:XP_038942111.1 Gene:Kif19 / 303659 RGDID:1559936 Length:997 Species:Rattus norvegicus


Alignment Length:725 Identity:199/725 - (27%)
Similarity:330/725 - (45%) Gaps:139/725 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 ENIKVVVRCRPMNQTEKERNCQNIV-EINEFAVSVTNP--------SARISQQKKFIFDSVYNMK 58
            :.:.|.:|.||::.:|.|.....|. :::|..|.:.:|        .|..|::|.::||..::..
  Rat    10 QQLMVALRVRPISVSELEEGATLIAHKVDEQMVVLMDPMEDPDDILRAHRSREKSYLFDVAFDFT 74

  Fly    59 TDTEVIYDEMCYSLVESTIEGYNGTIFAYGQTGCGKTHTMQGDENFSNSTGIIPKCFDHIFERIS 123
            ...|::|.....||:|..|.|||.|:||||.||||||:||.|.:   :..||..:..:.:|..|.
  Rat    75 ATQEMVYQATTKSLIEGVISGYNATVFAYGPTGCGKTYTMLGTD---HEPGIYVRTLNDLFRAIE 136

  Fly   124 MTTN-VRYLALVTYLEIYNERIRDLLNKNENTNVINHFLKELPGIG-----------VSVPTLTT 176
            .|:| :.|...::|||||||.||||||               |.:|           :.|..:|.
  Rat   137 ETSNDMEYEVSMSYLEIYNEMIRDLLN---------------PALGYLELREDSKGVIQVAGITE 186

  Fly   177 QPVVNANQCYDWLHFGNKNRVTAATLMNKNSSRSHTIFTITLEQSPFLNSIGSDAFGGICRGKLS 241
            ...:||.:....|..||:.|....|..|:.|||||.:..:.:.|...:.:|..:    :.:|:|.
  Rat   187 VSTINAKEIMQLLMKGNRQRTQEPTAANQTSSRSHAVLQVAVRQRNRVKNILQE----VRQGRLF 247

  Fly   242 LVDLAGSERQRKTGAQGDRLKEASQINLSLSALGNVISSLVD-GKAKHVPFRDSKLTRLLQDSLG 305
            ::|||||||..:|..:|.|:||.:.||.||.||||.|::|.| |..|::.:|||||||||:||||
  Rat   248 MIDLAGSERASQTQNRGQRMKEGAHINRSLLALGNCINALSDKGGNKYINYRDSKLTRLLKDSLG 312

  Fly   306 GNTKTLMISCISPTDIHYDETISTLRYASRAKNISNKPKINEDPKDARLRQYQNEILYLKRMLQ- 369
            ||::|:||:.|||....::|:.:||.||.|||||..:.|.|.......:.||.:.|..|:..:| 
  Rat   313 GNSRTVMIAHISPASTAFEESRNTLTYAGRAKNIRTRVKQNLLNVSYHIAQYTSIIADLRGEIQR 377

  Fly   370 ---ESQQIINKNNDPNKIIKSPLKIIQ--------------------------HTNMNSTKNVQI 405
               :..|...:.....|:.:..::.||                          |..|:..:  ::
  Rat   378 LKCKIDQQAGRGQARGKLDRGDIRHIQAEVQLHSGQEEQAEMGQLREQLISAFHEQMDVRR--RL 440

  Fly   406 IDL-GRNCKASFKTNNSILTKPNFP------LIQSKEEVQLQARSRIDLIKRSLIGGERIHDFEL 463
            ::| .:..:....|:..:||..::.      .::.:||.:.::.::.|..|.|..|.|. .:.|.
  Rat   441 LELENQAMEVQIDTSRHLLTIASWEHEKSRRALKWREERRKESYTKEDSEKDSDTGDEP-DNLEP 504

  Fly   464 KEKHMARKYAA-----QRHLSAIAIALSRVKC---------------------EDRDLLQGHYAT 502
            .|...||:..|     |:.|....:||.: :|                     |.|::|.  ...
  Rat   505 PEVASARENIAALVGEQKKLRKEKLALEQ-RCRELRARGRRLEETLPRRIGSEEQREVLS--LLC 566

  Fly   503 ITQEIDIKN-----------DYIRKCKEKIKMLEMEVSDLNSEFQLDREDYLDEIRNLGRQVKFH 556
            ...|::::|           ..:|..:|.::.||...|..:...|..|:...|....:.|.::..
  Rat   567 RVHELEVENTEMQSHALLRDSALRHRREAVRRLEQHRSLCDEIIQGQRQIIDDYNLEIPRHLEEL 631

  Fly   557 QQLFLKFSSNPGKFDRNWTPDTILQNSLWNDDLKMWRIPESDLIKLPPA----TQKSGLHCIHPL 617
            .:::|: ....|..:|....|.:...:|          .:|.|.|:.||    |..|.|..:..|
  Rat   632 YEVYLR-ELEEGSLERATIMDRVASRAL----------QDSSLPKITPAGTTLTPDSDLESVKTL 685

  Fly   618 VIHSENQHNN 627
            ...::...||
  Rat   686 SSEAQCPQNN 695

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Kif3CNP_651939.4 Motor_domain 3..339 CDD:277568 133/357 (37%)
Kinesin 10..339 CDD:278646 132/350 (38%)
Kif19XP_038942111.1 KISc_KIP3_like 11..346 CDD:276821 133/356 (37%)
Smc <326..661 CDD:224117 63/351 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.