DRSC/TRiP Functional Genomics Resources

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Protein Alignment Kif3C and Kif18b

DIOPT Version :9

Sequence 1:NP_651939.4 Gene:Kif3C / 43820 FlyBaseID:FBgn0039925 Length:649 Species:Drosophila melanogaster
Sequence 2:XP_008766505.1 Gene:Kif18b / 303575 RGDID:1310360 Length:841 Species:Rattus norvegicus


Alignment Length:793 Identity:221/793 - (27%)
Similarity:349/793 - (44%) Gaps:206/793 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 IKVVVRCRPMNQTEKERNCQNIVEINEFAVSVTNP------------SARISQQKK------FIF 51
            ::||||.||....|.|...:.::::.:..:.|.:|            |..:|..||      |:|
  Rat    10 VRVVVRVRPPTPKELESQRRPVIQVVDERMLVFDPEECDGGFPGLKWSGSLSGPKKKGKDLTFVF 74

  Fly    52 DSVYNMKTDTEVIYDEMCYSLVESTIEGYNGTIFAYGQTGCGKTHTMQGDENFSNSTGIIPKCFD 116
            |.|::.....:.::....:::::|.::|||.::||||.||.||||||.|.|   ...||:.....
  Rat    75 DRVFSEVATQQDVFQHTTHNILDSFLQGYNCSVFAYGATGAGKTHTMLGRE---GDPGIMYLTTM 136

  Fly   117 HIFERI-SMTTNVRYLALVTYLEIYNERIRDLLN-KNENTNVINHFLKELPGIGVSVPTLTTQPV 179
            .::.|: :.....::..|::|||:|||:|.|||. |...|      ::|.|..||.||.|:....
  Rat   137 ELYRRLEACQEEKQFEVLISYLEVYNEQIYDLLEPKGPLT------IREDPDKGVVVPGLSFHQP 195

  Fly   180 VNANQCYDWLHFGNKNRVTAATLMNKNSSRSHTIFTITLEQSPFLNSIGSDAFGGICR----GKL 240
            .:|.|..:.|..||.:|....|..|..|||||.||.|.::|        .|...|:.:    .|:
  Rat   196 ASAQQLLEMLTRGNCSRTQHPTDANATSSRSHAIFQIFVKQ--------QDRVPGLTQALRVAKM 252

  Fly   241 SLVDLAGSERQRKTGAQGDRLKEASQINLSLSALGNVISSLVD--GKAKHVPFRDSKLTRLLQDS 303
            ||:|||||||...|.|:|:||:|.:.||.||.||.||:::|.|  |:..|||:|||||||||:||
  Rat   253 SLIDLAGSERASSTHAKGERLREGANINRSLLALINVLNALADAKGRKSHVPYRDSKLTRLLKDS 317

  Fly   304 LGGNTKTLMISCISPTDIHYDETISTLRYASRAKNISNKPKINEDPKDARLRQY-------QNEI 361
            :|||.:|:||:.:||:.:.|::|.:||:||.|||.|....|.|....|..:.||       |.|:
  Rat   318 IGGNCRTVMIAAVSPSSLTYEDTYNTLKYADRAKEIRLTLKSNVISLDHHISQYATICQQLQAEV 382

  Fly   362 LYLKRMLQE----SQQIINKNNDPNK------IIKSPLKIIQHTNMNSTKNV-------QIIDLG 409
            ..|:..||.    :|.:..::..|.|      :..|||: ..|::.:.....       |...||
  Rat   383 AALREKLQTYEAGAQALQQRSPQPPKLSIPQNLSSSPLQ-PGHSSQSCAPEFHAKYDAPQEESLG 446

  Fly   410 RNCKA------------------SFKTNNSILTKPNF-----PLIQSKEEVQLQARSRID----- 446
            .:.:.                  .|.|.   :.:||.     |.:|:|:.:...:..|:|     
  Rat   447 TDSQGQGTVEENAPEQEQPPQDKQFPTQ---MPEPNLPGSPCPTVQAKQGMNQHSLQRLDAEHSK 508

  Fly   447 --------LIKR--------SLIGGERIHDFE------LKE--KH---------MARKYAAQRHL 478
                    |.:|        :|:..:.|.:||      |:|  :|         :||.....:.|
  Rat   509 QLALRVLRLAQRQYSLLQAANLLTPDMISEFETLQQLVLEESMEHGAESPRSPGLARGIPLAQEL 573

  Fly   479 ----SAIAIALS-RVKCEDRD-------------LLQG--HYATITQEIDIKNDYI--RKCKEKI 521
                |...::|| |..|....             .|.|  |...|....|..:|..  :..|||.
  Rat   574 CSESSECPLSLSLRPACSQESSRYCGPVTRTMAKQLSGLTHTLGIPLAPDCTSDKTSQKPTKEKK 638

  Fly   522 KMLEME----VSDLNSEFQLDREDYLDEIRNLGRQVKFHQQLFLKFSSNP--GKFDRNWTPD--- 577
            :.|.:|    :...:.|.:..|:.:|..:|. |...|      ::.||.|  .|.:|..:|.   
  Rat   639 RKLNLEEPGSLPAPSVEMKRQRQSFLPCLRR-GSLPK------IQPSSEPRTPKGERASSPSPSS 696

  Fly   578 -----TILQNSLWNDDLKMWRIPESDLIKLPPATQKSGLHCIHPLVIHSENQHNNQN-------- 629
                 |::::          |:|..     |.|.|    :|..||.:.:.:.:...|        
  Rat   697 RVCPATVIKS----------RVPLG-----PSALQ----NCSTPLTLPTRDLNTTFNVSEESPSK 742

  Fly   630 ----EIVVGEKVS 638
                |.:..||||
  Rat   743 PSFPEPIDWEKVS 755

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Kif3CNP_651939.4 Motor_domain 3..339 CDD:277568 136/359 (38%)
Kinesin 10..339 CDD:278646 133/354 (38%)
Kif18bXP_008766505.1 KISc 18..360 CDD:214526 133/358 (37%)
KISc_KIP3_like 18..353 CDD:276821 131/351 (37%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.910

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