DRSC/TRiP Functional Genomics Resources

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Protein Alignment Kif3C and klp6

DIOPT Version :9

Sequence 1:NP_651939.4 Gene:Kif3C / 43820 FlyBaseID:FBgn0039925 Length:649 Species:Drosophila melanogaster
Sequence 2:NP_001342739.1 Gene:klp6 / 2539700 PomBaseID:SPBC1685.15c Length:784 Species:Schizosaccharomyces pombe


Alignment Length:694 Identity:213/694 - (30%)
Similarity:313/694 - (45%) Gaps:152/694 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 NIKVVVRCRPMNQTEKERN---------------------------CQN----IVEINEFAVSV- 36
            :|.|.||.||.  ||:|:.                           |.|    ||.:.:..|.: 
pombe     6 SISVAVRVRPF--TEREKGLLAETPKSKEFLGDGSLAVSNTSSNTFCTNGIRKIVRVLDDNVLIF 68

  Fly    37 ----TNPSARISQQ-----KKF-----IFDSVYNMKTDTEVIYDEMCYSLVESTIEGYNGTIFAY 87
                .||.|::.:.     |:|     .||.::..:...|.:|......|::|.::|||.|:|||
pombe    69 DPPEENPLAKVQKSLLPAGKRFRDVRYAFDRLFGEEASQEDVYKGTTEPLLDSVLQGYNATVFAY 133

  Fly    88 GQTGCGKTHTMQGDENFSNSTGIIPKCFDHIFERI---SMTTNVRYLALVTYLEIYNERIRDLL- 148
            |.||||||||:.|.   .:..|||......:.:|:   ..|.||.  ..|:|||||||:||||| 
pombe   134 GATGCGKTHTISGR---PDDPGIIFLTMRALLDRVEGLKRTMNVD--ISVSYLEIYNEKIRDLLV 193

  Fly   149 ------NKNENTNVINHFLKELPGIGVSVPTLTTQPVVNANQCYDWLHFGNKNRVTAATLMNKNS 207
                  .|.::.|:.     |.....||||.|:.....|..:..:.:..||.||..:.|..|..|
pombe   194 QDPLSMEKPKSLNIC-----EDAEQNVSVPGLSYFTPTNLEEVMEIIIRGNSNRTMSPTEANAVS 253

  Fly   208 SRSHTIFTITLEQSPFLNSIGSDA---FGGICRGKLSLVDLAGSERQRKTGAQGDRLKEASQINL 269
            ||||.:..|.:.|:|.......::   .....|...|.:|||||||...|..:|.||.|.:.||.
pombe   254 SRSHAVLQIYITQTPKSGEKQEESESQNSHKVRSVFSFIDLAGSERASATKNRGKRLVEGANINR 318

  Fly   270 SLSALGNVISSLVDGKAK-HVPFRDSKLTRLLQDSLGGNTKTLMISCISPTDIHYDETISTLRYA 333
            ||.||||.|:||.:.:.: |||:|||||||||:.|||||.:|.||.||||:..|||||.:||:|.
pombe   319 SLLALGNCINSLCEPRRRQHVPYRDSKLTRLLKFSLGGNCRTCMIVCISPSSEHYDETHNTLKYG 383

  Fly   334 SRAKNISNKPKINEDPKDARLRQYQNEILYL--------KRMLQESQQIINKNNDPNKIIKSPLK 390
            :|||||..|...|....|..:.:|...|..|        ||:.:||:|:. .|.:..||      
pombe   384 NRAKNIKTKVSRNVVSVDRHVSEYVRTIYELRQKVSILQKRIAEESKQLA-LNKEVRKI------ 441

  Fly   391 IIQHTNMNSTKNVQIIDLGRNCKASFKTNNSI---LTKPNFPLIQSKEEVQLQARSRIDLIKRS- 451
                    |::.::::|.....|.||..:..:   |.:....|.:.::|:.| .:..|.:.|.| 
pombe   442 --------SSREIKMLDARSMLKNSFDGSRDLQKSLIEHVRTLRRIEDEITL-TKMWISIAKESD 497

  Fly   452 LIGGERIHDFELKEKHMARKYAAQRHL---------------SAIAIALSRVKCEDRDLLQGHYA 501
            .:.|   |:.:..|..:|:.| .||.|               ::|:..:|..|.|..|:    ||
pombe   498 AMSG---HNIKSVETRLAKLY-DQRSLITAKVNPEEICKTFQNSISHIVSSFKGEGADM----YA 554

  Fly   502 TITQEIDIKNDYIRKCKEKIKMLEMEVSDLNSEFQLDREDYLDEIRNLGRQVKFHQQLFLKFSSN 566
            .:.|: |:  |.::      .::|.::.|...|    .|.:....|      |..|.|||.|...
pombe   555 DMLQD-DV--DLLK------SIIENQILDAKHE----SETFSSTSR------KLIQNLFLLFPLL 600

  Fly   567 PGK-FDRNWTPDTILQNSLWND-DLKMWRIPESDLIKLPPATQK 608
            ||. .|.|        .||... |..:..:|....|::|...:|
pombe   601 PGNAIDVN--------ESLARAFDQLVGIVPSEPTIQVPNLIEK 636

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Kif3CNP_651939.4 Motor_domain 3..339 CDD:277568 145/394 (37%)
Kinesin 10..339 CDD:278646 142/388 (37%)
klp6NP_001342739.1 KISc_KIP3_like 6..389 CDD:276821 145/394 (37%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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