DRSC/TRiP Functional Genomics Resources

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Protein Alignment Kif3C and klp-12

DIOPT Version :9

Sequence 1:NP_651939.4 Gene:Kif3C / 43820 FlyBaseID:FBgn0039925 Length:649 Species:Drosophila melanogaster
Sequence 2:NP_001023349.1 Gene:klp-12 / 178057 WormBaseID:WBGene00002223 Length:1605 Species:Caenorhabditis elegans


Alignment Length:760 Identity:211/760 - (27%)
Similarity:330/760 - (43%) Gaps:199/760 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 IKVVVRCRPMNQTEK---ERNCQNIVEINEFAVSVTNPSARISQQKKFIFDSVYNMKTDTEVIYD 66
            ::|.:|.||....||   .|.|.:::.        .:|...|...:.|.:|.|::|.|...|:|:
 Worm     6 VQVALRIRPQGNREKLEGSRVCTSVLP--------NDPQVTIGGDRSFTYDHVFDMPTLQYVVYE 62

  Fly    67 EMCYSLVESTIEGYNGTIFAYGQTGCGKTHTM---------QGDENFSNSTGIIPKCFDHIFERI 122
            .....||:...:|||.|:.||||||.||||||         |.:|:.    |:||:...|.|.:|
 Worm    63 SCVEKLVDGLFDGYNATVLAYGQTGSGKTHTMGTAFDAAVTQKEEDL----GVIPRAIQHTFRKI 123

  Fly   123 SM---------TTNVRYLALVTYLEIYNERIRDLLNKNENTN------------VINHFLKELPG 166
            :.         .....:...|.::|:||:.:.|||:.:.:.:            ::.|.:::   
 Worm   124 AECKAQAIEQGLLEPAFEVSVQFVELYNDDVLDLLSDDRSMSSSIRIHEDSRGEIVLHGVEQ--- 185

  Fly   167 IGVSVPTLTTQPVVNANQCYDWLHFGNKNRVTAATLMNKNSSRSHTIFTITLEQ-----SPFLNS 226
                      :.|.:.:...|.|..|..||..|||.||:.|||||.|||:.|:|     :| |:.
 Worm   186 ----------RSVFDMHGTMDILKNGALNRTVAATNMNEQSSRSHAIFTLHLKQQRVAANP-LDE 239

  Fly   227 IGSDAFGG-----ICRGKLSLVDLAGSERQRKTGAQGDRLKEASQINLSLSALGNVISSL--VDG 284
            .|....|.     :| .|...||||||||.::|||.|||.||...||:.|.||||||::|  .:|
 Worm   240 SGEQKTGELEMEMLC-AKFHFVDLAGSERMKRTGATGDRAKEGISINVGLLALGNVIAALGGANG 303

  Fly   285 KAKHVPFRDSKLTRLLQDSLGGNTKTLMISCISPTDIHYDETISTLRYASRAKNISNKPKINEDP 349
            |..|||:||||||||||||||||::||||:|.||:|..:.||::|::||:|||.|.||...|:|.
 Worm   304 KVSHVPYRDSKLTRLLQDSLGGNSRTLMIACCSPSDSDFVETLNTMKYANRAKEIKNKVVANQDK 368

  Fly   350 KDARLRQYQNEILYLKRMLQESQQ-----------IINKNNDPN--------------KIIKSPL 389
            ....:.:.::.|..|:..|.|.:|           ::|.....|              |.:...|
 Worm   369 SSKMIGELRSRIAALEAELLEFKQGRRTVDVDGHEVVNDQYHENVYLTSEVNHLRFRVKALNETL 433

  Fly   390 KIIQHTNMN-----------------------------STKNVQIIDLGRNCKASFKTNNSI--L 423
            .|::..|::                             ||....:.:|.|.....:::.::.  |
 Worm   434 DILRTENIDLKAKQEFNSIASLPTAGSGGAEGEVDAIQSTFRKYLEELERTKSLLYESQSTCDQL 498

  Fly   424 TKPNF---------------------PLIQ-SKEEVQLQARSRIDLIKRSLIGGERI-------- 458
            .|.|.                     .||: :|:||:.|.:    |::...||||.:        
 Worm   499 RKDNARWKALGASRGSGGGNAEFNSQKLIEMAKQEVEKQRK----LMESVNIGGENVSSEYSSMA 559

  Fly   459 ----------------HDFELKEKHMARKYAAQRHLSAIAIALSRVKCE---DRDLLQGHYATIT 504
                            .|.:..|...|.:...|....|:.|.||.|..|   ...|:........
 Worm   560 QDEDGTSNEAEELLDEEDLDEDEDETAEEKQEQEESEALQIDLSEVMIELDIKEKLIDQLERAER 624

  Fly   505 QEIDIKNDY---IRKCKEKIKMLEMEVSDL----------NSEFQLDREDYLDEIRNLGRQVKFH 556
            |...|:..|   :|:..|:||..|.|...:          |.:.:..:::|..:|.:|.:::|..
 Worm   625 QNQQIRETYEKKLRELMERIKDTETERDRVLNEGGKRGGNNEQMKAIKQEYELKITDLRKELKKI 689

  Fly   557 QQLFLKFSSNPGKFDRNWTPDTILQNSLWNDDLKMWRIPESDLIK 601
            :.|..:......|..|.....|.|::.:  .|||..::   :|||
 Worm   690 EALDKEHLKVIAKSQRELQEKTRLKSEV--VDLKKAKV---ELIK 729

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Kif3CNP_651939.4 Motor_domain 3..339 CDD:277568 141/378 (37%)
Kinesin 10..339 CDD:278646 140/373 (38%)
klp-12NP_001023349.1 KISc_KIF4 4..359 CDD:276823 141/379 (37%)
KISc 6..365 CDD:214526 144/385 (37%)
ATP-synt_B <609..739 CDD:304375 26/126 (21%)
WD40 1277..1601 CDD:238121
WD40 <1287..1603 CDD:225201
WD40 repeat 1288..1322 CDD:293791
WD40 repeat 1327..1364 CDD:293791
WD40 repeat 1373..1429 CDD:293791
WD40 repeat 1439..1482 CDD:293791
WD40 repeat 1489..1524 CDD:293791
WD40 repeat 1531..1556 CDD:293791
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.910

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