DRSC/TRiP Functional Genomics Resources

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Protein Alignment Kif3C and Kif1a

DIOPT Version :10

Sequence 1:NP_651939.4 Gene:Kif3C / 43820 FlyBaseID:FBgn0039925 Length:649 Species:Drosophila melanogaster
Sequence 2:XP_006529218.1 Gene:Kif1a / 16560 MGIID:108391 Length:1800 Species:Mus musculus


Alignment Length:755 Identity:219/755 - (29%)
Similarity:330/755 - (43%) Gaps:192/755 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 NIKVVVRCRPMNQTEKERNCQNIVEINEFAVSVTNPSARISQQKKFIFDSVYNMKTDTE------ 62
            ::||.||.||.|..|..|:.:.|::::....::.||.......|.|.||..|...|..|      
Mouse     5 SVKVAVRVRPFNSREMSRDSKCIIQMSGSTTTIVNPKQPKETPKSFSFDYSYWSHTSPEDINYAS 69

  Fly    63 --VIYDEMCYSLVESTIEGYNGTIFAYGQTGCGKTHTMQGDENFSNSTGIIPKCFDHIFERISMT 125
              .:|.::...:::...||||..||||||||.||::||.|.:. .:..||||:..:.:|.||:.|
Mouse    70 QKQVYRDIGEEMLQHAFEGYNVCIFAYGQTGAGKSYTMMGKQE-KDQQGIIPQLCEDLFSRINDT 133

  Fly   126 T--NVRYLALVTYLEIYNERIRDLLN-KNENTNVINHFLKELPGIGVSVPTLTTQPVVNANQCYD 187
            |  |:.|...|:|:|||.||:||||| ||:.    |..::|.|.:|..|..|:...|.:.|...|
Mouse   134 TNDNMSYSVEVSYMEIYCERVRDLLNPKNKG----NLRVREHPLLGPYVEDLSKLAVTSYNDIQD 194

  Fly   188 WLHFGNKNRVTAATLMNKNSSRSHTIFTITLEQSPFLNSIGSDAFGGICR---GKLSLVDLAGSE 249
            .:..|||.|..|||.||:.|||||.:|.|...|.      ..||...|..   .|:|||||||||
Mouse   195 LMDSGNKARTVAATNMNETSSRSHAVFNIIFTQK------RHDAETNITTEKVSKISLVDLAGSE 253

  Fly   250 RQRKTGAQGDRLKEASQINLSLSALGNVISSLVD-----------GKAKHVPFRDSKLTRLLQDS 303
            |...|||:|.||||.:.||.||:.||.|||:|.:           .|...:|:|||.||.||:::
Mouse   254 RADSTGAKGTRLKEGANINKSLTTLGKVISALAEMDSGPNKNKKKKKTDFIPYRDSVLTWLLREN 318

  Fly   304 LGGNTKTLMISCISPTDIHYDETISTLRYASRAKNISNKPKINEDPKDARLRQYQNEILYLKRML 368
            ||||::|.|::.:||.||:||||:||||||.|||.|.....|||||.:..:|:.::|:..|:.:|
Mouse   319 LGGNSRTAMVAALSPADINYDETLSTLRYADRAKQIRCNAIINEDPNNKLIRELKDEVTRLRDLL 383

  Fly   369 --QESQQIINKNNDP------NKII--------------------------------------KS 387
              |....|.:.|..|      |.::                                      |.
Mouse   384 YAQGLGDITDTNTVPGGPKLTNALVGMSPSSSLSALSSRAASVSSLHERILFAPGSEEAIERLKE 448

  Fly   388 PLKIIQHTN------MNSTKNVQ------IIDLGRNCKASFKTNNSILTKPNFPLIQSKEEVQLQ 440
            ..|||...|      :..|:.::      :.::|...:....| ..:.:....|.:.:..|..|.
Mouse   449 TEKIIAELNETWEEKLRRTEAIRMEREALLAEMGVAMREDGGT-LGVFSPKKTPHLVNLNEDPLM 512

  Fly   441 ARSRIDLIKRSL--IG---GERIHDFEL-----KEKHM---------------------ARKYAA 474
            :...:..||..:  :|   .||..|..|     ||:|.                     |..|..
Mouse   513 SECLLYYIKDGVTRVGREDAERRQDIVLSGHFIKEEHCIFRSDSRGGGEAVVTLEPCEGADTYVN 577

  Fly   475 QRHLSAIAIALS-------------------------RVKCED------------RDLLQGHYAT 502
            .:.::..:|..|                         |..|.:            |:||:.....
Mouse   578 GKKVTEPSILRSGNRIIMGKSHVFRFNHPEQARQERERTPCAETPAEPVDWAFAQRELLEKQGID 642

  Fly   503 ITQEI-----DIKNDYIRKCKEKIKMLEMEVSDLNSEF-----QLD----------REDYLDEIR 547
            :.||:     ::::.|.|:.:|...:||.:..|..|:.     |:|          .|:..||::
Mouse   643 MKQEMEQRLQELEDQYRREREEATYLLEQQRLDYESKLEALQKQMDSRYYPEVNEEEEEPEDEVQ 707

  Fly   548 NLGRQVKFHQQLFLKFSSNPGKFDRNWTPDTILQNSLWND 587
            ...|:.:.....|.|:         .|...|.|::.||.:
Mouse   708 WTERECELALWAFRKW---------KWYQFTSLRDLLWGN 738

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Kif3CNP_651939.4 Motor_domain 3..339 CDD:473979 152/359 (42%)
Kif1aXP_006529218.1 KISc_KIF1A_KIF1B 4..361 CDD:276816 153/366 (42%)
Kinesin_assoc 358..524 CDD:465047 27/166 (16%)
FHA_KIF1A 500..614 CDD:438778 17/113 (15%)
ERM_helical 633..>686 CDD:466641 12/52 (23%)
KIF1B 814..861 CDD:463574
DUF3694 1250..1406 CDD:463599
PH_KIFIA_KIFIB 1681..1783 CDD:269939
Blue background indicates that the domain is not in the aligned region.

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