DRSC/TRiP Functional Genomics Resources

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Protein Alignment Kif3C and kif26a

DIOPT Version :9

Sequence 1:NP_651939.4 Gene:Kif3C / 43820 FlyBaseID:FBgn0039925 Length:649 Species:Drosophila melanogaster
Sequence 2:XP_004917245.2 Gene:kif26a / 100491850 XenbaseID:XB-GENE-6051360 Length:2010 Species:Xenopus tropicalis


Alignment Length:750 Identity:177/750 - (23%)
Similarity:285/750 - (38%) Gaps:243/750 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 IKVVVRCRPMNQTEKERNCQNIVEINEFAVSVT--NPS-----------ARISQQKKFIFDSVYN 56
            :|::||..|....:......:.::::.....||  :||           |.::..|.|.||||:.
 Frog   408 VKIMVRICPFQGPQNTSESMSFLKVDPRKKQVTLYDPSTCGPSVSVHRRAVVAVPKMFAFDSVFP 472

  Fly    57 MKTDTEVIYDEMCYSLVESTIEGYNGTIFAYGQTGCGKTHTMQGDENFSNSTGIIPKCFDHIFER 121
            .......:.......:::|.:.|.:|.||.:|....||::||.|.:..:.|.||||.....:|:.
 Frog   473 QDASQAEVCSGTVAEVIQSVVNGADGCIFCFGHVRLGKSYTMIGKDASTQSLGIIPCAISWLFKL 537

  Fly   122 IS---MTTNVRYLALVTYLEIY--NERIRDLLNKNENTNVINH------FLKELPGIGVSVPTLT 175
            |:   ..|..|:...|:.:||:  :|.::||| ..|.|..:..      :|:|.|..|..   |.
 Frog   538 INERKEKTGTRFSIRVSAVEIFGKDENLKDLL-AEEATGSLQDGQSPGVYLREDPICGTQ---LQ 598

  Fly   176 TQPVVNANQCYDWLHFGNKNRVTAATLMNKNSSR----------SHTIFTITLEQSPFLNSIGSD 230
            .|..:.|.......||      ..|.|..:::||          ||.:||:.:.|.....|....
 Frog   599 NQSELRAPTAEKAAHF------LDAALAARSTSRPDCDEEERRNSHMLFTLHIYQYRMEKSGKGG 657

  Fly   231 AFGGICRGKLSLVDLAGSER---QRKTGAQGDRLKEASQINLSLSALGNVISSLVDGKAKHVPFR 292
            ..||  |.:|.|:||...|:   :.:.|..|        :.|||:||||||.:||:| |||:|:|
 Frog   658 MSGG--RSRLHLIDLGSCEKVLSKSRDGCGG--------LCLSLTALGNVILALVNG-AKHIPYR 711

  Fly   293 DSKLTRLLQDSLGG-NTKTLMISCISPTDIHYDETISTLRYASRAKNISNK-------------- 342
            |||||.|||:|||. |.:|.||:.||.:..:|.||:||::.|||...:..|              
 Frog   712 DSKLTMLLQESLGNINCRTTMIAHISDSPANYQETLSTVQLASRIHRMKKKKSKYASSSSGGESS 776

  Fly   343 ---------PKI----------------------------------------------------- 345
                     |.|                                                     
 Frog   777 CEEGRVRRPPHIRPFHQRTVVLDPDFPTLGFHSDPDYSSSSEQSCDTVIYVGPNGAALSDKELTD 841

  Fly   346 NEDP---------------KD--ARLRQYQNEILYLKRM--LQESQQIINKNNDPNK-IIKSPL- 389
            ||.|               ||  :.:|...|:.|.....  |||..:.|:.:.:|.: :|:.|: 
 Frog   842 NEGPPEFVPIIPSLLKKRSKDNLSSIRSSDNDHLKCNTFAELQERLECIDGSEEPARFLIEEPVA 906

  Fly   390 ----KIIQH-TNMNSTKNVQIIDLGRNCK-------ASFKTNNSILTKPNFPLIQSKEEVQL--- 439
                |.:.: .|::|||...:  |...||       .|.|...:|:....||...|..|...   
 Frog   907 AHCNKAMNYEDNVHSTKEKTL--LSGICKRPGFQDMVSPKKGQNIIISTAFPPNISDSETNAPQS 969

  Fly   440 -----QARSRIDLIKRSLIG-GERI-----------------------HDFELKEKHMARKYAAQ 475
                 |..::.:.:|...|. |.::                       .:..:|||.:    .|:
 Frog   970 AHEHPQQHAKAENVKPECISDGNQVTIMDLQKTLAPSVCKAQEIPKGATEISVKEKAL----MAR 1030

  Fly   476 RHLSAIA-------------------IALSRVKCEDRDLLQGHYATITQEIDIKND------YIR 515
            |||.:.|                   |.:|::||:|:..|    .:.|..:.|...      .:|
 Frog  1031 RHLPSPAPPPGSQSCSSNNVGVRTPPIGMSKLKCQDKHKL----VSSTLPVGISTPKQPGPIEVR 1091

  Fly   516 KCKEKIK-------MLEMEVSDLNSEFQLDREDYL 543
            :.:..:|       :|...|: |....:|:.||.|
 Frog  1092 RFRSAVKTNGFDRDILTTTVT-LQKPVELNGEDEL 1125

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Kif3CNP_651939.4 Motor_domain 3..339 CDD:277568 115/371 (31%)
Kinesin 10..339 CDD:278646 113/366 (31%)
kif26aXP_004917245.2 KISc 407..757 CDD:276812 115/369 (31%)
DUF5401 <1868..>1975 CDD:375164
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
11.000

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