DRSC/TRiP Functional Genomics Resources

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Protein Alignment Kif3C and kif17

DIOPT Version :9

Sequence 1:NP_651939.4 Gene:Kif3C / 43820 FlyBaseID:FBgn0039925 Length:649 Species:Drosophila melanogaster
Sequence 2:NP_001090675.1 Gene:kif17 / 100036648 XenbaseID:XB-GENE-6455381 Length:802 Species:Xenopus tropicalis


Alignment Length:685 Identity:275/685 - (40%)
Similarity:376/685 - (54%) Gaps:95/685 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 SENIKVVVRCRPMNQTEKERNCQNIVEINEF--AVSVTNPSARISQQKKFIFDSVYNMKTDTEVI 64
            ||.:||||||||||..|::.|||.::.::..  ...:..|.......|:|.||..|..:..||.|
 Frog     3 SECVKVVVRCRPMNSRERDMNCQFVITMDSSRGQCFIRKPEGGDETPKQFTFDGAYYTEHCTEQI 67

  Fly    65 YDEMCYSLVESTIEGYNGTIFAYGQTGCGKTHTMQGDENFSNSTGIIPKCFDHIFERISMTTNVR 129
            |:|:.|.|||...||||||||||||||.||:.:|||.....:..||||:.|:||||.|....|.:
 Frog    68 YNEIGYPLVEGVTEGYNGTIFAYGQTGSGKSFSMQGVPEPPSQRGIIPRAFEHIFESIQCAENTK 132

  Fly   130 YLALVTYLEIYNERIRDLLNKNENTNVINHFLKELPGIGVSVPTLTTQPVVNANQCYDWLHFGNK 194
            :|...:|||||||.|||||..:....:   .|||.|..||.|..|:...|.:..:|...:..|..
 Frog   133 FLVRASYLEIYNEEIRDLLGADPKQKL---ELKEHPERGVYVRDLSLHTVHSVTECEKIMEIGWG 194

  Fly   195 NRVTAATLMNKNSSRSHTIFTITLEQSPFLNSIGSDAFGGICRGKLSLVDLAGSERQRKTGAQGD 259
            ||....|||||:|||||:||||.:|    :.|...:....:..|||:||||||||||.||||.|:
 Frog   195 NRSVGYTLMNKDSSRSHSIFTINIE----ICSTDDNGKDHLRAGKLNLVDLAGSERQAKTGATGE 255

  Fly   260 RLKEASQINLSLSALGNVISSLVDGKAKHVPFRDSKLTRLLQDSLGGNTKTLMISCISPTDIHYD 324
            |||||::|||||||||||||:|||||:||:|:|||||||||||||||||||||::|:||.|.:||
 Frog   256 RLKEATKINLSLSALGNVISALVDGKSKHIPYRDSKLTRLLQDSLGGNTKTLMVACLSPADNNYD 320

  Fly   325 ETISTLRYASRAKNISNKPKINEDPKDARLRQYQNEILYLKRML--------------------- 368
            |::||||||:|||:|.|||:||||||||.|||||:||..||.:|                     
 Frog   321 ESLSTLRYANRAKSIRNKPRINEDPKDALLRQYQDEIKQLKSLLLEQNGPRDSPGLERCAVPKAR 385

  Fly   369 ---QESQQIINKN--------------NDPNKIIKSPLKI-----------------IQHTNMN- 398
               .||...:.|.              .|.....||.:::                 ::|...| 
 Frog   386 RGGSESDMEVEKRLIRQEYEERFAQLLADYEAEQKSRVRLEKDISDLRTTYDQQRASMEHDLRNR 450

  Fly   399 STKNVQIIDLGRNCKA-------------SFKTNN-SILTKPNFPLIQSKEEVQLQ-ARSRIDLI 448
            |.....:.|.|...::             |..|:| ..|..|..|..:....|..| ..:|:.::
 Frog   451 SASERDVTDSGAAGESEPADPLPMAPQLNSVGTDNVETLVAPTLPAKEPSRNVTPQNVLARLQML 515

  Fly   449 KRSLIGGERIHDFELKEKHMARKYAAQRHLSAIAIALSRVKCEDRDLLQGHYATITQEIDIKNDY 513
            ::.::|||:..:.:||||...||..|......:.:||......:|.||: .|.:|.:|:..|:..
 Frog   516 EQQVVGGEQAENKDLKEKRRRRKKYADERKEELRVALQSEDSNERVLLR-VYESIQEELQAKSRL 579

  Fly   514 IRKCKEKIKMLEMEVSDLNSEFQLDREDYLDEIRNLGRQVKFHQQL------FLKFSSNPGKFDR 572
            :.|.::|::..:.|:.||..||:.:|:|||..||....::...||:      .::...|....||
 Frog   580 LDKLQDKLRASDTEIEDLLCEFERERKDYLAAIRRQEMELLLQQQILDQVQPLIRRDCNYSNLDR 644

  Fly   573 NWTPDTILQNSLWNDDLKMWRIPESDLIK--LPPA 605
                  |.:.:.|::|...||:||..|.|  ||.|
 Frog   645 ------IRREAQWDEDSYRWRLPEVVLHKTSLPSA 673

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Kif3CNP_651939.4 Motor_domain 3..339 CDD:277568 183/337 (54%)
Kinesin 10..339 CDD:278646 178/330 (54%)
kif17NP_001090675.1 Motor_domain 4..335 CDD:277568 183/337 (54%)
Kinesin 11..335 CDD:278646 178/330 (54%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 128 1.000 Domainoid score I5253
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 465 1.000 Inparanoid score I1512
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0006941
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X5033
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
44.050

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