DRSC/TRiP Functional Genomics Resources

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Protein Alignment pho and Zic1

DIOPT Version :10

Sequence 1:NP_524630.1 Gene:pho / 43819 FlyBaseID:FBgn0002521 Length:520 Species:Drosophila melanogaster
Sequence 2:NP_073168.1 Gene:Zic1 / 64618 RGDID:620110 Length:447 Species:Rattus norvegicus


Alignment Length:360 Identity:98/360 - (27%)
Similarity:144/360 - (40%) Gaps:82/360 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   178 GSDQIVGASDLLKGKEEFGIDGFTS-----QQNKEYQKMESKFTNAQTLEMP------------H 225
            |:.:...|.|:.:.....||:.|..     :.|....::.|....|.|.:.|            |
  Rat    18 GASRHHSAGDVAERDVGLGINPFADGMGAFKLNPSSHELASAGQTAFTSQAPGYAAAAALGHHHH 82

  Fly   226 P-----ISSV---QIMDHLIKER--GNLSQENNISERILSKTTLSFEEPILLPDSSSIEL---VN 277
            |     .||.   ...|.|.:.|  |:.:...:....:.:.:...|..|....|::...|   ::
  Rat    83 PGHVGSYSSAAFNSTRDFLFRNRGFGDAAAAASAQHSLFAASAGGFGGPHGHTDAAGHLLFSGLH 147

  Fly   278 ETAA-----MTINNHRTLSNHTGNTGDLHALPSSVPFRIGLHEGQVNDCLSTISQSTHQDNTDST 337
            |.||     ..:|....|    |.:||::..|...        |||     |..:|.|.......
  Rat   148 EQAAGHASPNVVNGQMRL----GFSGDMYPRPEQY--------GQV-----TSPRSEHYAAPQLH 195

  Fly   338 GCGEMNLS--------------------EVTVSYTNDKKIACPHKGCNKHFRDSSAMRKHL---H 379
            |.|.||::                    |:...:...:::|.|.|.|||.|.....:..|:   |
  Rat   196 GYGPMNVNMAAHHGAGAFFRYMRQPIKQELICKWIEPEQLANPKKSCNKTFSTMHELVTHVTVEH 260

  Fly   380 THGPRV--HVC--AEC---GKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRI 437
            ..||..  |:|  .||   ||.|....||..|..||||||||.|.|.||||.|:...||:.|.|.
  Rat   261 VGGPEQSNHICFWEECPREGKPFKAKYKLVNHIRVHTGEKPFPCPFPGCGKVFARSENLKIHKRT 325

  Fly   438 HTGDRPFVCPFDACNKKFAQSTNLKSHILTHAKAK 472
            |||::||.|.|:.|:::||.|::.|.|:..|...|
  Rat   326 HTGEKPFKCEFEGCDRRFANSSDRKKHMHVHTSDK 360

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
phoNP_524630.1 C2H2 Zn finger 359..381 CDD:275368 8/24 (33%)
COG5048 <386..515 CDD:227381 44/92 (48%)
C2H2 Zn finger 388..408 CDD:275368 9/24 (38%)
zf-H2C2_2 401..426 CDD:463886 16/24 (67%)
C2H2 Zn finger 416..438 CDD:275368 11/21 (52%)
zf-H2C2_2 430..457 CDD:463886 13/26 (50%)
C2H2 Zn finger 446..468 CDD:275368 8/21 (38%)
Zic1NP_073168.1 zf_ZIC 219..264 CDD:436441 10/44 (23%)
C2H2 Zn finger 276..296 CDD:275368 7/19 (37%)
SFP1 <298..382 CDD:227516 31/63 (49%)
C2H2 Zn finger 304..326 CDD:275368 11/21 (52%)
C2H2 Zn finger 334..356 CDD:275368 8/21 (38%)
C2H2 Zn finger 364..384 CDD:275368
Blue background indicates that the domain is not in the aligned region.

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