DRSC/TRiP Functional Genomics Resources

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Protein Alignment pho and sall3a

DIOPT Version :9

Sequence 1:NP_524630.1 Gene:pho / 43819 FlyBaseID:FBgn0002521 Length:520 Species:Drosophila melanogaster
Sequence 2:XP_005157904.1 Gene:sall3a / 560775 ZFINID:ZDB-GENE-020228-4 Length:1322 Species:Danio rerio


Alignment Length:506 Identity:104/506 - (20%)
Similarity:164/506 - (32%) Gaps:179/506 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly    46 IHSESKKGDNVINYNIHENDKIKAADNIFSSK----------------LKMNPN--MSYEMNINC 92
            ||..|..|:.....||        ..|.||:|                ::|||.  ..|..|:..
Zfish   490 IHLRSHTGERPFKCNI--------CGNRFSTKGNLKVHFQRHKEKYPHIQMNPYPVPEYLDNVPT 546

  Fly    93 FKNIGYGENQETSKVLTNSLSNNDI-NTEESGVVDKNSPFLTLGTTILNSNGKSRRWEQKLVHIK 156
            ...|.||.:....|.:|..|.:..| .|..:.|..:..|.:   .:|:.|.|.|..:        
Zfish   547 SSGIPYGMSLPPEKPVTTWLDSKPILPTIPTSVALQLPPTI---PSIIESYGDSTSF-------- 600

  Fly   157 TMEGEFSVTMWASGISDDEYSGSDQIVGASDLLKGKEEFGIDGFTSQQNKEYQKMESKFTNAQTL 221
                                                         |..|:..|:           
Zfish   601 ---------------------------------------------SPLNRSPQR----------- 609

  Fly   222 EMPHPISSVQIM---DHLIKERGNLSQENNISERILSKTTLSFEEPILLPD-------------- 269
              |.|.||....   :|||.|. :::|.::..:..|:..|    .|:|.|:              
Zfish   610 --PSPPSSECTSLSPNHLITET-SIAQISSSPQPNLASNT----PPVLKPEALHLPPNSTTRPGE 667

  Fly   270 -----SSSIELVNETAAMTINNHRTLSNHTGNTGDLHALP----SSVPFRIGLHEGQVNDCLSTI 325
                 :|..::::.|...|..:.||......|:....:.|    ||..|:.....|.:.|.:.|.
Zfish   668 TSISTTSISQVISTTIVTTTCSTRTQLTDPVNSSSAVSHPSLQISSNQFKPKFPFGGLLDSMQTS 732

  Fly   326 SQSTHQDNTDSTGCGEMNLSEVTVSYTNDKKIACPHKGCNKHFRDSSAMRKHLHTHGPRVHVCAE 390
            ..|..|...::.                |||:..|::                         |..
Zfish   733 ETSKLQQLVENI----------------DKKMTDPNQ-------------------------CVI 756

  Fly   391 CGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPF----VCPFDAC 451
            |.:.....|.||.|..:||||:||:|..  ||:.|:...||:||..:|....|.    .||.  |
Zfish   757 CHRVLSCQSALKMHYRIHTGERPFKCKI--CGRAFTTKGNLKTHFGVHRSKPPLRVQHSCPI--C 817

  Fly   452 NKKFAQSTNLKSHILTHAKAK-RNTSISGKSGCSNAE--SNSQSEDTSANY 499
            .|||..:..|:.||..|...: .||.:......::|:  .:.:|.|..:||
Zfish   818 QKKFTNAVVLQQHIRMHMGGQIPNTPLPDTFQDTDADLSFDEKSLDAMSNY 868

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
phoNP_524630.1 Transpos_assoc <342..382 CDD:290671 4/39 (10%)
C2H2 Zn finger 359..381 CDD:275368 1/21 (5%)
COG5048 <386..515 CDD:227381 39/121 (32%)
zf-C2H2 386..408 CDD:278523 6/21 (29%)
C2H2 Zn finger 388..408 CDD:275368 6/19 (32%)
zf-H2C2_2 401..426 CDD:290200 12/24 (50%)
C2H2 Zn finger 416..438 CDD:275368 8/21 (38%)
zf-H2C2_2 430..457 CDD:290200 12/30 (40%)
C2H2 Zn finger 446..468 CDD:275368 9/21 (43%)
sall3aXP_005157904.1 PHA03169 <29..>190 CDD:223003
COG5048 461..>787 CDD:227381 79/421 (19%)
C2H2 Zn finger 475..495 CDD:275368 2/4 (50%)
C2H2 Zn finger 503..523 CDD:275368 6/27 (22%)
C2H2 Zn finger 754..774 CDD:275368 6/19 (32%)
zf-H2C2_2 766..791 CDD:316026 13/26 (50%)
C2H2 Zn finger 782..802 CDD:275368 8/21 (38%)
zf-C2H2 812..834 CDD:306579 9/23 (39%)
C2H2 Zn finger 814..834 CDD:275368 9/21 (43%)
zf-C2H2 1135..1157 CDD:306579
C2H2 Zn finger 1137..1157 CDD:275368
zf-H2C2_2 1149..1174 CDD:316026
C2H2 Zn finger 1165..1185 CDD:275368
zf-C2H2 1165..1185 CDD:306579
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1943
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.030

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