DRSC/TRiP Functional Genomics Resources

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Protein Alignment pho and sall1a

DIOPT Version :9

Sequence 1:NP_524630.1 Gene:pho / 43819 FlyBaseID:FBgn0002521 Length:520 Species:Drosophila melanogaster
Sequence 2:NP_001139486.1 Gene:sall1a / 555721 ZFINID:ZDB-GENE-020228-2 Length:1313 Species:Danio rerio


Alignment Length:522 Identity:106/522 - (20%)
Similarity:164/522 - (31%) Gaps:186/522 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 TKVNQKMNEGNHYDLHRKNAFDRIIHS---ESKKGDNVI----NYNIHENDKI---KAADNIFSS 76
            ||.|.|    .||.:||.....|:.||   ..||..|.:    :..:|...:|   ...|| :..
Zfish   733 TKGNLK----THYSVHRAMPPLRVQHSCPICQKKFTNAVVLQQHIRMHMGGQIPNTPLPDN-YPE 792

  Fly    77 KLKMNPNMSYEMNINCFKNIGYGENQETSKVLTNSLSNNDINTEESGVVDKNSPFLTLGTTILNS 141
            .:..:.....|.||:...|.. .:|.|.   :.:...::..:|.:|  ||.:...|....|:..|
Zfish   793 SMGSDAGSFDERNIDDLDNFS-DDNMEG---IEDGPDSSIPDTPKS--VDASQDSLCSSPTLHES 851

  Fly   142 NGKSRRWEQKLVHIKTMEGEFSVTMWASGISDDEYSGSDQIVGASDLLKGKEEFGIDGFTSQQNK 206
            .|...|.::|..:    .|......:..|.|.:           :.|::|      |.||:..:.
Zfish   852 FGMDERIQEKSAN----HGAGEEVQYDQGKSVE-----------NGLVEG------DRFTNDSSS 895

  Fly   207 -----EYQKMESKFTNAQTLEMPHPISSVQIMDHLIKERGNLSQENNISERILSKTTLSFEEPIL 266
                 |.|...|...:..|..|..|..|          .|...|:.:.|.....:..||.|.   
Zfish   896 LGGDIESQSAGSPAVSESTSSMQAPSPS----------NGIFQQQKSPSMEDRQQRALSLEH--- 947

  Fly   267 LPDSSSIELVNETAAMTINNHRTLSNHTGNTGDLHALPSS-------VPFRIGLHEGQVNDCLST 324
                .|..|::..:|            :....||.::.||       .|||   ..|.:.     
Zfish   948 ----ISASLMHSNSA------------SPGALDLTSVNSSKDPISMLFPFR---ERGTLK----- 988

  Fly   325 ISQSTHQDNTDSTGCGEMNLSEVTV-----SYTNDKKIACPHKGCNKHFRDSSAMRKHLHTH--- 381
                    ||....||:....:..:     |:|.::...|  ..||:.|.....:::|:.||   
Zfish   989 --------NTACDICGKTFACQSALDIHYRSHTKERPFIC--TVCNRGFSTKGNLKQHMLTHQMR 1043

  Fly   382 ----------------------------------------------------------------- 381
                                                                             
Zfish  1044 DLPSQLFEPNTSLASSLASSPTPSLLSVGPLSSMMKTEVNGFLHGLQPEVKDLPPALVTSSASTS 1108

  Fly   382 ----------GPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVR 436
                      .|:.|.|..|||.|..||.|:.|:..|||||||.||.  ||:.|:...||:.|:.
Zfish  1109 PVLSAAPPRRTPKQHFCTTCGKTFSSSSALQIHERTHTGEKPFACTI--CGRAFTTKGNLKVHMG 1171

  Fly   437 IH 438
            .|
Zfish  1172 TH 1173

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
phoNP_524630.1 Transpos_assoc <342..382 CDD:290671 9/122 (7%)
C2H2 Zn finger 359..381 CDD:275368 5/21 (24%)
COG5048 <386..515 CDD:227381 26/53 (49%)
zf-C2H2 386..408 CDD:278523 10/21 (48%)
C2H2 Zn finger 388..408 CDD:275368 9/19 (47%)
zf-H2C2_2 401..426 CDD:290200 13/24 (54%)
C2H2 Zn finger 416..438 CDD:275368 8/21 (38%)
zf-H2C2_2 430..457 CDD:290200 4/9 (44%)
C2H2 Zn finger 446..468 CDD:275368
sall1aNP_001139486.1 ZnF_C2H2 443..465 CDD:197676
C2H2 Zn finger 445..465 CDD:275368
zf-H2C2_2 457..482 CDD:290200
C2H2 Zn finger 473..493 CDD:275368
C2H2 Zn finger 696..716 CDD:275368
zf-H2C2_2 708..733 CDD:290200 106/522 (20%)
C2H2 Zn finger 724..744 CDD:275368 6/14 (43%)
zf-C2H2 754..776 CDD:278523 5/21 (24%)
C2H2 Zn finger 756..776 CDD:275368 3/19 (16%)
C2H2 Zn finger 992..1012 CDD:275370 2/19 (11%)
zf-H2C2_2 1004..1029 CDD:290200 6/26 (23%)
zf-C2H2 1018..1040 CDD:278523 5/23 (22%)
C2H2 Zn finger 1020..1040 CDD:275370 5/21 (24%)
zf-C2H2 1123..1145 CDD:278523 10/21 (48%)
C2H2 Zn finger 1125..1145 CDD:275368 9/19 (47%)
zf-H2C2_2 1137..1162 CDD:290200 14/26 (54%)
C2H2 Zn finger 1153..1173 CDD:275368 8/21 (38%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1943
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.030

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