DRSC/TRiP Functional Genomics Resources

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Protein Alignment pho and Zic4

DIOPT Version :10

Sequence 1:NP_524630.1 Gene:pho / 43819 FlyBaseID:FBgn0002521 Length:520 Species:Drosophila melanogaster
Sequence 2:XP_011241021.1 Gene:Zic4 / 22774 MGIID:107201 Length:403 Species:Mus musculus


Alignment Length:298 Identity:87/298 - (29%)
Similarity:125/298 - (41%) Gaps:70/298 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   216 TNAQTLEMPHPISSVQIMDHLIKERGNLSQENNISERILSKTTLSFEEPILLPDSSSIELVNETA 280
            :.|||.:|.:..|.|      :::|..| ..|.:.|   |.::.....|.|...|      |.:.
Mouse    51 SQAQTQKMKYKTSLV------MRKRLRL-YRNTLKE---SSSSCGHHGPQLAASS------NPSV 99

  Fly   281 AMTINNHRTLSNHT---------GNTGDLHALPSSVPFRIGLHEGQVNDCLSTISQSTHQDNTDS 336
            ...::.....::|:         |..||::|  .|.||..|  ....:|.|:| :.:.|      
Mouse   100 LPGLHEQPPQASHSRPLNGLLRLGIPGDMYA--RSEPFAPG--PMARSDTLAT-ATALH------ 153

  Fly   337 TGCGEMNLS----------------------EVTVSYTNDKKIACPHKGCNKHFRDSSAMRKHL- 378
             |.|.|||:                      |:...:..|.....| :.|:|.|.....:..|: 
Mouse   154 -GYGGMNLTMNLTAPHGPGAFFRYMRQPIKQELICKWLGDDSPMSP-RPCSKTFSTMHELVTHVT 216

  Fly   379 --HTHGPRV--HVC--AEC---GKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTH 434
              |..||..  |:|  .||   ||.|....||..|..||||||||.|.|.||||.|:...||:.|
Mouse   217 VEHVGGPEQANHICFWEECPRQGKPFKAKYKLVNHIRVHTGEKPFPCPFPGCGKVFARSENLKIH 281

  Fly   435 VRIHTGDRPFVCPFDACNKKFAQSTNLKSHILTHAKAK 472
            .|.|||::||.|.|:.|.::||.|::.|.|...|...|
Mouse   282 KRTHTGEKPFRCEFEGCERRFANSSDRKKHSHVHTSDK 319

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
phoNP_524630.1 C2H2 Zn finger 359..381 CDD:275368 6/24 (25%)
COG5048 <386..515 CDD:227381 44/92 (48%)
C2H2 Zn finger 388..408 CDD:275368 9/24 (38%)
zf-H2C2_2 401..426 CDD:463886 16/24 (67%)
C2H2 Zn finger 416..438 CDD:275368 11/21 (52%)
zf-H2C2_2 430..457 CDD:463886 13/26 (50%)
C2H2 Zn finger 446..468 CDD:275368 8/21 (38%)
Zic4XP_011241021.1 zf_ZIC 179..223 CDD:436441 8/44 (18%)
COG5048 <200..345 CDD:227381 51/120 (43%)
C2H2 Zn finger 235..255 CDD:275368 7/19 (37%)
C2H2 Zn finger 263..285 CDD:275368 11/21 (52%)
C2H2 Zn finger 293..315 CDD:275368 8/21 (38%)
C2H2 Zn finger 323..345 CDD:275368
Blue background indicates that the domain is not in the aligned region.

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