DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment pho and Sall3

DIOPT Version :9

Sequence 1:NP_524630.1 Gene:pho / 43819 FlyBaseID:FBgn0002521 Length:520 Species:Drosophila melanogaster
Sequence 2:NP_001356062.1 Gene:Sall3 / 20689 MGIID:109295 Length:1320 Species:Mus musculus


Alignment Length:531 Identity:106/531 - (19%)
Similarity:164/531 - (30%) Gaps:192/531 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly    46 IHSESKKGDNVINYNIHENDKIKAADNIFSSK----------------LKMNPN--MSYEMNINC 92
            ||..|..|:.....||        ..|.||:|                ::|||.  ..|..|:..
Mouse   444 IHLRSHTGERPFKCNI--------CGNRFSTKGNLKVHFQRHKEKYPHIQMNPYPVPEYLDNVPT 500

  Fly    93 FKNIGYGENQETSKVLTNSLSNNDINTEESGVVDKNSPFLTLGTTILNSNGKSRRWEQKLVHIKT 157
            ...|.||.:....|.:|..|.:..:.......|....|....||                     
Mouse   501 CSGIPYGMSLPPEKPVTTWLDSKPVLPTVPTSVGLQLPPTVPGT--------------------- 544

  Fly   158 MEGEFSVTMWASGISDDEYSGSDQIVGASDLLKGKEEFGIDGFTSQQNKEYQKMESKFTNAQTLE 222
                            ..|:.|..|...|                                ::.:
Mouse   545 ----------------HNYTDSPSITPVS--------------------------------RSPQ 561

  Fly   223 MPHPISS--VQIMDHLIKERGNLSQENNISERILSKTTLSFEEPILLPDSSS-----------IE 274
            .|.|.||  ..:...|......::......:.:|...:|:..||:.||.:|:           :.
Mouse   562 RPSPASSECTSLSPGLNNTESGITVRPESPQPLLGGPSLTKAEPVSLPCTSTRTGDAPVVGGQVS 626

  Fly   275 LVNETAAMTINNHRTLSNHTGNTGDLHALPS-SVPFRIGLHEGQVNDCLSTISQSTHQDNTDSTG 338
            .:..:||..:.:....|  .|:.|    ||: |..|:.....|.:.|.:.|...|..|...::. 
Mouse   627 GLPTSAATAVTDSACTS--LGSPG----LPAVSDQFKAQFPFGGLLDSMQTSETSKLQQLVENI- 684

  Fly   339 CGEMNLSEVTVSYTNDKKIACPHKGCNKHFRDSSAMRKHLHTHGPRVHVCAECGKAFVESSKLKR 403
                           |||:..|::                         |..|.:.....|.||.
Mouse   685 ---------------DKKMTDPNQ-------------------------CVICHRVLSCQSALKM 709

  Fly   404 HQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPF----VCPFDACNKKFAQSTNLKSH 464
            |...||||:||:|..  ||:.|:...||:||..:|....|.    .||.  |.|||..:..|:.|
Mouse   710 HYRTHTGERPFKCKI--CGRAFTTKGNLKTHFGVHRAKPPLRVQHSCPI--CQKKFTNAVVLQQH 770

  Fly   465 ILTHAKAK-RNTSI-SGKSGC---------SNAES----------NSQSEDTSANYVKVELQDSV 508
            |..|...: .||.: .|....         .|||:          ||..||:       ||:|:.
Mouse   771 IRMHMGGQIPNTPLPEGLQEAMDADLPFDEKNAETLSSFDDDIDENSMEEDS-------ELKDTA 828

  Fly   509 TENHVPFVVYA 519
            :::..|.:.|:
Mouse   829 SDSSKPLLSYS 839

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
phoNP_524630.1 Transpos_assoc <342..382 CDD:290671 4/39 (10%)
C2H2 Zn finger 359..381 CDD:275368 1/21 (5%)
COG5048 <386..515 CDD:227381 45/153 (29%)
zf-C2H2 386..408 CDD:278523 6/21 (29%)
C2H2 Zn finger 388..408 CDD:275368 6/19 (32%)
zf-H2C2_2 401..426 CDD:290200 12/24 (50%)
C2H2 Zn finger 416..438 CDD:275368 8/21 (38%)
zf-H2C2_2 430..457 CDD:290200 12/30 (40%)
C2H2 Zn finger 446..468 CDD:275368 9/21 (43%)
Sall3NP_001356062.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..49
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 84..166
PHA03247 <242..384 CDD:223021
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 271..367
COG5048 419..>727 CDD:227381 73/408 (18%)
C2H2 Zn finger 429..449 CDD:275368 2/4 (50%)
zf-H2C2_2 441..466 CDD:338759 8/29 (28%)
C2H2 Zn finger 457..477 CDD:275368 6/27 (22%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 534..623 19/157 (12%)
C2H2 Zn finger 694..714 CDD:275368 6/19 (32%)
zf-H2C2_2 706..731 CDD:338759 13/26 (50%)
COG5048 718..1168 CDD:227381 37/133 (28%)
C2H2 Zn finger 722..742 CDD:275368 8/21 (38%)
C2H2 Zn finger 754..774 CDD:275368 9/21 (43%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 807..846 9/40 (23%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 878..972
C2H2 Zn finger 999..1019 CDD:275368
C2H2 Zn finger 1027..1047 CDD:275368
C2H2 Zn finger 1135..1155 CDD:275368
C2H2 Zn finger 1163..1183 CDD:275368
zf-C2H2 1163..1183 CDD:333835
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1943
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.030

Return to query results.
Submit another query.