DRSC/TRiP Functional Genomics Resources

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Protein Alignment MED26 and Tcea1

DIOPT Version :10

Sequence 1:NP_651936.1 Gene:MED26 / 43816 FlyBaseID:FBgn0039923 Length:1483 Species:Drosophila melanogaster
Sequence 2:NP_001020906.1 Gene:Tcea1 / 362479 RGDID:1309880 Length:301 Species:Rattus norvegicus


Alignment Length:337 Identity:61/337 - (18%)
Similarity:119/337 - (35%) Gaps:71/337 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 IQELTTHLSQALDQNYDVVNMDAVLCVICALEGTTITKEQLEATRLAKYINQLRRRTKNEHLARR 70
            :::....:::.:|:.....|....|.::..|:...:|.|.|::||:...:|.:|:::.:|.:...
  Rat     1 MEDEVVRIAKKMDKMVQKKNAAGALDLLKELKNIPMTLELLQSTRIGMSVNAIRKQSTDEEVTSL 65

  Fly    71 AKSLLKKWREMVGIQQTATENLAHPSQISSSQPALDLVKSPITSFITEPIAPSQQIVSDLHSNID 135
            ||||:|.|::::....|..:     |:....:||:....||                       :
  Rat    66 AKSLIKSWKKLLDGPSTDKD-----SEEKKKEPAISSQNSP-----------------------E 102

  Fly   136 SAEPPLSGEHTLLHPNFSNLVNSIKDSDRHENIAITTLHTHKDRRHSHSIR-SCHVASPQPIVID 199
            :.|...|..|          |:|.||.....:..:::.  .:....|.|:| .|.          
  Rat   103 AREESSSSSH----------VSSRKDETNARDTYVSSF--PRAPSTSDSVRLKCR---------- 145

  Fly   200 HSVNSVINLTDDSTVKINEASVVIDIASDSDENDNNGSLNPKKLNSIVPAPLPIPSTPSSRQRKL 264
            ..:.:.:...||.            :|..:||.:....:.......|....:...:...||...|
  Rat   146 EMLAAALRTGDDY------------VAIGADEEELGSQIEEAIYQEIRNTDMKYKNRVRSRISNL 198

  Fly   265 KKEKRSKEREGQVATNTRFGAKASDGFQQAALTTDSEIFSLSNSSMSSIVSGDATSSYSQNKSRL 329
            |..|....|:     |...|....|.|   |..|..|:.|.....|...::.:|...:...|:..
  Rat   199 KDAKNPNLRK-----NVLCGNIPPDLF---ARMTAEEMASDELKEMRKNLTKEAIREHQMAKTGG 255

  Fly   330 NSNELTFTGRFK 341
            ...:|...|:.|
  Rat   256 TQTDLFTCGKCK 267

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MED26NP_651936.1 TFSII 13..>129 CDD:273592 24/115 (21%)
Med26 32..82 CDD:462573 15/49 (31%)
Tcea1NP_001020906.1 TFSII 4..301 CDD:273592 61/334 (18%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 76..139 14/102 (14%)

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