DRSC/TRiP Functional Genomics Resources

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Protein Alignment MED26 and tcea1

DIOPT Version :10

Sequence 1:NP_651936.1 Gene:MED26 / 43816 FlyBaseID:FBgn0039923 Length:1483 Species:Drosophila melanogaster
Sequence 2:NP_956288.1 Gene:tcea1 / 336105 ZFINID:ZDB-GENE-030131-8049 Length:309 Species:Danio rerio


Alignment Length:327 Identity:62/327 - (18%)
Similarity:121/327 - (37%) Gaps:94/327 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MNQIEIQELTTHLSQALDQNYDVVNMDAVLCVICALEGTTITKEQLEATRLAKYINQLRRRTKNE 65
            |.:.|.:|: ..:::.:|:.....|....|.::..|:...:|.|.|::||:...:|.:|:::.::
Zfish     1 MGKKEEEEI-IRIAKKMDKMAQKKNGVGALDLLKELKNIPMTLELLQSTRIGMSVNAIRKQSTDD 64

  Fly    66 HLARRAKSLLKKWREM---------------------VGIQQTATENLAHPSQISSSQPALDLVK 109
            .:...||||:|.|:::                     |...:|:.|.....|..:||..:..:..
Zfish    65 EVTSLAKSLIKSWKKLLDEPAADKNSEEKKKERTTPVVSPSETSPEPREESSSSNSSSKSESVDV 129

  Fly   110 SPITSFITEPIAPSQQIVSDLHSNIDSAEPPLSGEHTLLHPNFSNLVNSIKDSDRHENI------ 168
            :|.|...|.|.||.   .|| ...|...|               .|.|:::..|.:..|      
Zfish   130 TPNTLIATFPRAPG---TSD-SVRIKCRE---------------MLSNALQTGDDYITIGSDCDE 175

  Fly   169 -------AITTLHTHKDRRHSHSIRSCHVASPQPIVIDHSVNSVINLTDDSTVKINEASVVIDIA 226
                   .|.....:.|.::.:.:||                .:.||.|.....:.         
Zfish   176 LGAQIEECIFLEFKNTDMKYKNRVRS----------------RISNLKDAKNPNLR--------- 215

  Fly   227 SDSDENDNNGSLNPKKLNSIVPAPLPIPSTPSSRQRKLKKEKRSKE--REGQVATNTRFGAKASD 289
                .|...|:::|.::..:....:      :|.:.|..::..:||  |:.||||:   |...:|
Zfish   216 ----RNVLCGNVSPDRIAKMTAEEM------ASDELKEMRKNLTKEAIRDHQVATS---GGTQTD 267

  Fly   290 GF 291
            .|
Zfish   268 LF 269

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MED26NP_651936.1 TFSII 13..>129 CDD:273592 29/136 (21%)
Med26 32..82 CDD:462573 14/70 (20%)
tcea1NP_956288.1 TFSII 7..309 CDD:273592 60/321 (19%)

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