DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment bt and Kalrn

DIOPT Version :9

Sequence 1:NP_001162825.1 Gene:bt / 43814 FlyBaseID:FBgn0005666 Length:8933 Species:Drosophila melanogaster
Sequence 2:XP_038944566.1 Gene:Kalrn / 84009 RGDID:621865 Length:2989 Species:Rattus norvegicus


Alignment Length:1965 Identity:412/1965 - (20%)
Similarity:663/1965 - (33%) Gaps:583/1965 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly  6485 DGKSRIK-GYYVEMR-PKNGKDWKTVNDIPINSTVYTVPSLKEGEEYSFRVVAENEVGRSDPSKP 6547
            :||..:| |..|.:. ||...|...|             |:.||.:.:..|  :.|:...|..:.
  Rat  1437 EGKGELKDGLEVMLSVPKKANDAMHV-------------SMLEGFDENLDV--QGELILQDAFQV 1486

  Fly  6548 SQPITIEEQPNKPCMELGKVRDIVCRAGDDFSIHVPYLAFPKPNAFWYSNDNMLDDNNRVHKHLT 6612
            ..|.::..:..:..:.|.::..:..:...|.|.|..|:         |.| .:|.....|.:|:.
  Rat  1487 WDPKSLIRKGRERHLFLFEISLVFSKEIKDSSGHTKYV---------YKN-KLLTSELGVTEHVE 1541

  Fly  6613 DDAASVVVKNSKRADSGQYRLQLKNTSGFDT---------ATINVRV----------LDRPSPPT 6658
            .|.....:. |.|..|...:..|| .|..:|         ..|..|:          :..|..|.
  Rat  1542 GDPCKFALW-SGRTPSSDNKTVLK-ASNIETKQEWIKNIREVIQERI
IHLKGALKEPIQLPKTPA 1604

  Fly  6659 RLRADE-----FSGDSLTLYWNPPNDDGGSAIQNYIIEKKEARSSTWS-KVSSFCTVPFVRIRNL 6717
            :||.:.     ..|||        ..||.|......|..:.::::..| |:|..|.:      .:
  Rat  1605 KLRNNSKRDGVEDGDS--------QGDGSSQPDTISIASRTSQNTVESDKLSGGCEL------TV 1655

  Fly  6718 VLNKEYDFRVIAENKYGQSDPANTSE-PILARHPFDIPNTPGIPHG---IDSTEDSITIAWTKPK 6778
            ||.   ||           ..|::|| .|......::...|....|   :.:||.|       |.
  Rat  1656 VLQ---DF-----------SAAHSSELSIQVGQTVELLERPSERPGWCLVRTTERS-------PP 1699

  Fly  6779 HDGGSPITGYIIEKRLLSDDKWTKAVHALCPDLSCKIPNLIENAEYEFRVAAVNAAGQSAYSGSS 6843
            .:|..|.:...|.....|            .::.|..| |:::: |.      :::|::  .|.|
  Rat  1700 QEGLVPSSTLCISHSRSS------------VEMDCFFP-LVKDS-YS------HSSGEN--GGKS 1742

  Fly  6844 DLIFCRRPPHAPKITSDLSIRDMTVIAGDEFRITVPYHASPRPTASWSLNGLE---VIPGERI-- 6903
            :.:        ..:.|..|:..:              |:||.|..  |.|.|:   ..|..|:  
  Rat  1743 ESV--------ANLQSQPSLNSI--------------HSSPGPKR--STNTLKKWLTSPVRRLNS 1783

  Fly  6904 -KFDSNDYASMYYNKSAKRDETGSYTITLTNNKGSDTASCHVTVVDR-----------------P 6950
             |.|.|       .|..|:...|..:..|.:.|..|..:......|.                 |
  Rat  1784 GKADGN-------IKKQKKVRDGRKSFDLGSPKPGDETTPQGDSADEKSKKGWGEDEPDEESHTP 1841

  Fly  6951 LPPQGPLNAYDITP-----DTCTLAWKTPLD-----DGGSPITNYVVEKLD-NSGSW---VKISS 7001
            |||  |:..:|..|     .:...|.:.|.|     |..|.|...|..||. ..||:   :|..:
  Rat  1842 LPP--PMKIFDNDPTQDEMSSLLAARQAPTDVPTAADLVSAIEKLVKSKLTLEGGSYRGSLKDPT 1904

  Fly  7002 FVRNTHYDVMGLEP-------------------HYKYNFRVRAENQYGLSDPLDIIEPIVAK-HQ 7046
            ...|.     |:.|                   .:..|..|:.|..| :.|...::|..:.: .:
  Rat  1905 VCLNE-----GMAPPTPPRNLEEEQKAKALRGRMFVLNELVQTEKDY-VKDLGIVVEGFMKRIEE 1963

  Fly  7047 FTVP-DEPGQPKVIDWDSGNVTLI--WTRPLSDGGSRIQGYQIEYRDILNDSSWNAYDYIIKDTK 7108
            ..|| |..|:.|::   .||:..|  |.:..         :..|....:.:....|..:|..:.|
  Rat  1964 KGVPEDMRGKEKIV---FGNIHQIYDWHKDF---------FLAELEKCIQEQDRLAQLFIKHERK 2016

  Fly  7109 YQLYNLINGSEYEFRIKAKNAAGLSKPSSPSLRFKLKGKFTVPSPPGAPQVTRVGKNYVDLKWE- 7172
            ..:|...          .:|     ||.|..:                  |......:.::|.| 
  Rat  2017 LHIYVWY----------CQN-----KPRSEYI------------------VAEYDAYFEEVKQEI 2048

  Fly  7173 -----------KPLRDGGSRITGYI--------------IERRDIGGAVWV------KCNDYNVL 7206
                       ||::    |||.|.              :|..||..||.:      :|||    
  Rat  2049 NQRLTLSDFLIKPIQ----RITKYQLLLKDFLRYSEKAGLECSDIEKAVELMCLVPKRCND---- 2105

  Fly  7207 DTEYTVMNLIEMGDYEFRVFAVNSAGRSEPSLCTMPIKVCEVLGGKKPDWITR---LQDKVAPFG 7268
                 :|||..:..:|..:.|.....:.:      ...|.|:..|.:.....|   |.:::..|.
  Rat  2106 -----MMNLGRLQGFEGTLTAQGKLLQQD------TFYVIELDAGMQSRTKERRVFLFEQIVIFS 2159

  Fly  7269 KDYTLQCAASGKPSPTARWLRNGKEIQMNGGRMTCDSKDGVFRLHISNVQTGDDGDYTCEAMNSL 7333
                 :....|..:|...:.|:   |:||...:..|..|...:..:.|.:|.:            
  Rat  2160 -----ELLRKGSLTPGYMFKRS---IKMNYLVLEEDVDDDPCKFALMNRETSE------------ 2204

  Fly  7334 GFVNTSGYLKIGSPPIINRCPSEL-KLPEGDNSKIKIFYSGDQPLTVILKKNNEVICDSNDDTHV 7397
                 ...|:..:|.|......:: ::.|.....:....|   |:....|:.:..:..|...   
  Rat  2205 -----RVILQAANPDIQQAWVQDINQVLETQRDFLNALQS---PIEYQRKERSTAVIRSQPP--- 2258

  Fly  7398 KVNIFDDYVAIYIRNIVKSDGGPYQIEFTNESGSATGEFYVHITGMPSAPTGPMGISYINKNSCM 7462
                          .:.::...||............|..|       :.|..|:.||..|.:   
  Rat  2259 --------------RVPQASPRPYSSVPVGSEKPPKGSSY-------NPPLPPLKISTSNGS--- 2299

  Fly  7463 LNWRPPSYD---GGLKVSHYVIERKDVSSPHWITVSSTCKD-TAFNVQGLIENQEYIFRVMAVNE 7523
                 |.:|   .|.|..  ..::.|:...:..:..:..|| .|.....:..:|..:.:|:|||:
  Rat  2300 -----PGFDYHQPGDKFD--ASKQNDLGGCNGTSTMAVIKDYYALKENEICVSQGEVVQVLAVNQ 2357

  Fly  7524 NGM----------GPPLEGLNPIRAKDPIDPPSPPGSPQITEIGGDFVHLEWEKPESDGGAHIQG 7578
            ..|          .|..||..|.....|:...:.|..                  .||.......
  Rat  2358 QNMCLVYQPASDHSPAAEGWVPGSILAPLTKATAPAE------------------SSDESIKKSC 2404

  Fly  7579 YW----IDKREVGSNTWQRVNATICAANQINCINLIEGRQYEFRIFAQNVAGLSTESSASQAVKI 7639
            .|    :.||....||.:               |...|.:....|.....:...|.||.......
  Rat  2405 SWHTLRMRKRADVENTGK---------------NEATGPRKPKDILGNKASVKETNSSEESECDD 2454

  Fly  7640 IDP------------QAASPPLIVKPLRDANCIQNHNAQFTCTINGVPKPTISWYKGAREISNGA 7692
            :||            |..:|..:| ||.|..|:........|...|.|||||:| ||..:     
  Rat  2455 LDPNTSMEILNPNFIQEVAPEFLV-PLVDVTCLLGDTVLLQCKACGRPKPTITW-KGPDQ----- 2512

  Fly  7693 RYHMYSEGDNHFLNINDVFGEDADEYVCRAVNKAGAKSTRATLAIMTAPKLNVPPRFRDTAYFDK 7757
                         ||.|.....|...:      :...|..:||.|     .|:.|:         
  Rat  2513 -------------NILDTDNSSATYTI------SSCDSGESTLKI-----CNLMPQ--------- 2544

  Fly  7758 GENVVIKIPFTGFPKPRIHWVRDGENIESGGHYTVEVKERHAVLIIRDGSHLDSGPYRITAENEL 7822
                                                                |||.|...|.|:.
  Rat  2545 ----------------------------------------------------DSGIYTCIATNDH 2557

  Fly  7823 GSDTAIIQVQISDRPDPPRFPLIESIGTESLSLSWKAPVWDGCSDITNYYVERREHPLSSWIR-V 7886
            |:.:....|::...|..|..|:.:.....|:.|.|..|...|...|:.|.||.||.....|.: |
  Rat  2558 GTASTSATVKVQGVPAAPNRPIAQERSCTSVILRWLPPASTGNCTISGYTVEYREEGSQVWQQSV 2622

  Fly  7887 GNTRFTSMAVSGLTPGKEYDFRIFADNVYGRSDASDTSTLIKTKESVKKKPIERKWEIDANGRKL 7951
            .:|..|.:.:..|:||..|.||:.|.|.:|.|..|:.|..:...|          ::..|:|..:
  Rat  2623 ASTLDTYLVIEDLSPGCPYQFRVSASNPWGISLPSEPSEFVHLPE----------YDAAADGATI 2677

  Fly  7952 RGKADGPVKDYDSYVFDIYSKFVPQPVEISQQSVYDRYDILEEIGTGAFGVVHRCRERSTGNIFA 8016
            ..|     :::||                       .|..|.|||.|.|.:|.:|..::|....|
  Rat  2678 SWK-----ENFDS-----------------------AYTELNEIGRGRFSIVKKCIHKATRKDVA 2714

  Fly  8017 AKFIPVSHSVEKDLIRREIDIMNQLHHQKLINLHDAFEDDDEMILILEFLSGGELFERITAEGYV 8081
            .||:. ....:|:....|..::..|.|.:.:.|||.:|.....|||||.:..|.|.:.:.....:
  Rat  2715 VKFVS-KKMKKKEQAAHEAALLQHLQHPQYVTLHDTYESPTSYILILELMDDGRLLDYLMNHDEL 2778

  Fly  8082 MTEAEVINYMRQICEGIRHMHEQNIIHLDIKPENIMCQTRSST-NVKLIDFGLATRLDPNEVVKI 8145
            | |.:|..|:|.|.|.::::|...:.||||||||::...|... .|||||...|.::..:..:..
  Rat  2779 M-EEKVAFYIRDIMEALQYLHNCRVAHLDIKPENLLIDLRIPVPRVKLIDLEDAVQISGHFHIHH 2842

  Fly  8146 TTGTAEFAAPEIVNREPVGFYTDMWATGVLSYVLLSGLSPFAGDNDVQTLKNVKACDWDFDVESF 8210
            ..|..||||||::...||...||:|:.|||:||:|||:|||..::..:|..||...|:.|..|.|
  Rat  2843 LLGNPEFAAPEVIQGIPVSLGTDIWSIGVLTYVMLSGVSPFLDESKEETCINVCRVDFSFPHEYF 2907

  Fly  8211 KYISEEAKDFIRKLLVRNKEKRMTAHECLLHPWL---TGDHSAMKQEINRDRYLAYREKLRRKYE 8272
            ..:|..|:|||..:|..:..:|.||..||.||||   .|.:|  |..::..|...:.|  |||::
  Rat  2908 CGVSNAARDFINVILQEDFRRRPTAATCLQHPWLQPHNGSYS--KIPLDTSRLACFIE--RRKHQ 2968

  Fly  8273 DFERFLLPIGRLSEY 8287
            :..|   ||..:..|
  Rat  2969 NDVR---PIPNVKSY 2980

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
btNP_001162825.1 I-set 9..101 CDD:254352
Ig 26..100 CDD:143165
I-set 119..210 CDD:254352
Ig 136..209 CDD:143165
I-set 228..320 CDD:254352
IGc2 242..312 CDD:197706
I-set 335..425 CDD:254352
Ig 350..423 CDD:143165
Ig 436..530 CDD:299845
I-set 438..532 CDD:254352
I-set 545..636 CDD:254352
Ig 560..633 CDD:143165
Ig 657..731 CDD:143165
I-set 746..835 CDD:254352
Ig 1496..1586 CDD:299845
IG_like 1503..1588 CDD:214653
I-set 1639..1724 CDD:254352
IG 1750..1821 CDD:214652
IGc2 1750..1806 CDD:197706
I-set 1826..1909 CDD:254352
Ig 1831..1897 CDD:299845
I-set 1914..1998 CDD:254352
Ig 2020..2095 CDD:299845
FN3 2100..2194 CDD:238020
FN3 2203..2292 CDD:238020
I-set 2311..2395 CDD:254352
Ig 2321..2395 CDD:299845
FN3 2399..2493 CDD:238020
FN3 2501..2590 CDD:238020
I-set 2602..2693 CDD:254352
Ig 2619..2693 CDD:299845
FN3 2697..2793 CDD:238020
FN3 2801..2893 CDD:238020
I-set 2902..2995 CDD:254352
Ig 2919..2993 CDD:299845
FN3 2999..3088 CDD:238020
FN3 3102..3191 CDD:238020
I-set 3208..3292 CDD:254352
Ig 3219..3292 CDD:299845
FN3 3296..3390 CDD:238020
FN3 3400..3489 CDD:238020
I-set 3494..3590 CDD:254352
Ig 3516..3590 CDD:299845
FN3 3594..3682 CDD:238020
FN3 3694..3781 CDD:238020
I-set 3795..3885 CDD:254352
Ig 3813..3885 CDD:299845
FN3 3889..3980 CDD:238020
FN3 3990..4082 CDD:238020
I-set 4090..4181 CDD:254352
Ig 4108..4181 CDD:299845
FN3 4185..4271 CDD:238020
FN3 4285..4383 CDD:238020
Ig 4404..4480 CDD:299845
FN3 4484..4571 CDD:238020
FN3 4584..4677 CDD:238020
I-set 4685..4775 CDD:254352
Ig 4703..4775 CDD:299845
FN3 4779..4863 CDD:238020
FN3 4879..4970 CDD:238020
IG 4989..5069 CDD:214652
Ig 4996..5069 CDD:299845
FN3 5073..5166 CDD:238020
FN3 5175..5265 CDD:238020
I-set 5276..5366 CDD:254352
Ig 5293..5366 CDD:299845
FN3 5370..5462 CDD:238020
FN3 5470..5561 CDD:238020
Ig 5559..5654 CDD:299845
I-set 5570..5660 CDD:254352
FN3 5664..5755 CDD:238020
FN3 5764..5853 CDD:238020
I-set 5865..5954 CDD:254352
Ig 5882..5954 CDD:299845
FN3 5958..6049 CDD:238020
FN3 6062..6153 CDD:238020
I-set 6173..6255 CDD:254352
Ig_Titin_like 6182..6255 CDD:143225
FN3 6259..6350 CDD:238020
FN3 6359..6451 CDD:238020
FN3 6470..6552 CDD:238020 16/68 (24%)
I-set 6564..6650 CDD:254352 19/94 (20%)
Ig_Titin_like 6577..6650 CDD:143225 18/81 (22%)
FN3 6654..6745 CDD:238020 22/97 (23%)
FN3 6754..6840 CDD:238020 15/88 (17%)
I-set 6855..6946 CDD:254352 20/96 (21%)
Ig 6874..6946 CDD:299845 18/77 (23%)
FN3 6950..7042 CDD:238020 28/124 (23%)
FN3 7050..7139 CDD:238020 17/91 (19%)
FN3 7151..7237 CDD:238020 22/117 (19%)
I-set 7254..7334 CDD:254352 13/82 (16%)
Ig 7272..7339 CDD:143165 10/66 (15%)
IG_like 7354..7440 CDD:214653 9/86 (10%)
Ig 7366..7440 CDD:299845 8/73 (11%)
FN3 7444..7531 CDD:238020 20/100 (20%)
FN3 7545..7637 CDD:238020 14/95 (15%)
I-set 7648..7737 CDD:254352 22/88 (25%)
Ig 7665..7734 CDD:143165 15/68 (22%)
Ig 7760..7833 CDD:299845 8/72 (11%)
FN3 7837..7927 CDD:238020 30/90 (33%)
STKc_Twitchin_like 7986..8244 CDD:271016 94/258 (36%)
S_TKc 7989..8244 CDD:214567 94/255 (37%)
Ig 8311..8394 CDD:299845
I-set 8312..8401 CDD:254352
I-set 8437..8525 CDD:254352
Ig 8455..8519 CDD:143165
I-set 8632..8721 CDD:254352
IGc2 8646..8711 CDD:197706
I-set 8740..8831 CDD:254352
Ig 8757..8826 CDD:143165
I-set 8839..8922 CDD:254352
Ig 8845..>8909 CDD:299845
KalrnXP_038944566.1 SEC14 42..180 CDD:214706
SPEC 193..413 CDD:238103
SPEC 314..539 CDD:238103
SPEC 540..769 CDD:238103
SPEC 894..1132 CDD:238103
SPEC 1138..1238 CDD:197544
RhoGEF 1287..1457 CDD:238091 7/19 (37%)
PH1_Kalirin_Trio_like 1464..1586 CDD:270060 25/135 (19%)
SH3_Kalirin_1 1652..1711 CDD:212786 16/85 (19%)
SH3-RhoG_link 1708..1892 CDD:406906 46/238 (19%)
RhoGEF 1935..2104 CDD:395496 38/218 (17%)
PH2_Kalirin_Trio_p63RhoGEF 2109..2243 CDD:270061 25/167 (15%)
SH3_Kalirin_2 2327..2385 CDD:212787 13/57 (23%)
Ig strand A 2466..2469 CDD:409353 0/2 (0%)
I-set 2474..2568 CDD:400151 34/185 (18%)
Ig strand A' 2482..2485 CDD:409353 1/2 (50%)
Ig strand B 2491..2498 CDD:409353 1/6 (17%)
Ig strand C 2504..2512 CDD:409353 5/8 (63%)
Ig strand C' 2515..2517 CDD:409353 0/1 (0%)
Ig strand D 2523..2532 CDD:409353 0/14 (0%)
Ig strand E 2534..2538 CDD:409353 2/3 (67%)
Ig strand F 2547..2555 CDD:409353 3/7 (43%)
Ig strand G 2558..2568 CDD:409353 2/9 (22%)
FN3 2572..2663 CDD:238020 30/90 (33%)
STKc_Kalirin_C 2693..2940 CDD:271017 90/248 (36%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0613
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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