DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment bt and Palld

DIOPT Version :9

Sequence 1:NP_001162825.1 Gene:bt / 43814 FlyBaseID:FBgn0005666 Length:8933 Species:Drosophila melanogaster
Sequence 2:NP_001280701.1 Gene:Palld / 72333 MGIID:1919583 Length:1408 Species:Mus musculus


Alignment Length:1767 Identity:327/1767 - (18%)
Similarity:549/1767 - (31%) Gaps:605/1767 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly  7314 ISNVQ-TGDDGDYTCEAMNSLGFVNTSGYLKIGSPPIINRCPSELKLPEGDNSKIKIFYSGDQPL 7377
            :|:|| .|...|:         |...|.:|   |...||: ..:|.....|:|:.:.|.| ::.:
Mouse    14 LSDVQEEGKSADF---------FPGLSAFL---SQEEINK-SLDLARRAIDSSETEDFDS-EKEI 64

  Fly  7378 TVILKKNNEVICDSNDDTHVKVNIFDDYVAIYIRNIVKSDGGPYQIEFTNESGSA-----TGEFY 7437
            :.|..|:...:|::......|                  .|.....|...:|..|     ||:..
Mouse    65 SQIFSKSPISLCETPSHEEPK------------------SGKQTSSERPQDSRRAPVQPLTGDQA 111

  Fly  7438 VHITGMPSAPTGPMGISYINKNSCMLNWRPPSYDGGLKVSHYVIERKDVSSPHWITVSSTCKDTA 7502
            ..||. |.:...| |:|.:..:        |||...|:.:    |::...:|:..:...|.:.:.
Mouse   112 ERITS-PGSKRKP-GVSPLLAS--------PSYIRSLRKA----EKRGAKNPNPSSKPKTAQQSK 162

  Fly  7503 FNVQ--------GLIENQEYIFRVMAVNENGMGPPLEGLNPIRAKDPIDPPSPPGSPQITEIGGD 7559
            ...|        ..||....|||..|...| ..|..|..:|  ....:.|.:.|.:.......  
Mouse   163 AGPQSQLCDKAASFIEELTSIFREAAKPRN-RSPNGESSSP--DSGYLSPKNQPSALMSASAS-- 222

  Fly  7560 FVHLEWEKPESDGGAHIQGYWIDKREVGSNTWQRVNATICAANQINCINLIEGRQYEFRIFAQNV 7624
                  :.|.:|        .:|:.|:.:...|...:....|:|                     
Mouse   223 ------QSPTAD--------QLDQLEMDAEVKQAQGSLCYQAHQ--------------------- 252

  Fly  7625 AGLSTESSASQAVKIIDPQAA----SPPLIVKPLRDANCIQNHNAQFTCTINGVPKPTISWYKGA 7685
              .|.|:.....:....||.|    :.|..::.||.....:.......|.:.|.|.|.:.|:...
Mouse   253 --ASEETLPLAHIPHPQPQKARHLPTAPRFIQKLRSQEVAEGSRVYLECRVTGNPTPRVRWFCEG 315

  Fly  7686 REISNGARYHMYSE-GDNHFLNINDVFGEDADEYVCRAVNKAGAKSTRATLAI------------ 7737
            :|:.|.....::.| |:.|.|.|.:.|.:|...|.|.|.|.:|:.||.|.:.|            
Mouse   316 KELYNSPDVQIHCESGELHTLVIAEAFEDDTGRYTCLATNPSGSDSTSAEVFIEGASSTDSDSES 380

  Fly  7738 -------------------------MTAPK----------LNVP--------------------- 7746
                                     .:|||          |:||                     
Mouse   381 LSFISKAGAMPQAQKKTTSVSLTIGSSAPKTGVTTAVIQPLSVPVQQAHSATSYLCRPDGTTMGC 445

  Fly  7747 --PRF----RDTAYFDKGENVVIKIPFTGFPKPRIHWVRDGENIESGGHYTVEVK--------ER 7797
              |.|    ::|| ..:|:.||::....|.|..::.|.|.|..|:....:.:..|        |.
Mouse   446 LLPVFTKELQNTA-ASEGQVVVLECRVRGAPPLQVQWFRQGSEIQDSPDFRILQKKPRSTAEPEE 509

  Fly  7798 HAVLIIRDGSHLDSGPYRITAENELGSDTAIIQVQI-----------------SDR----PDPPR 7841
            ...|:|.:....|:|.:..:|.|:.||.|:..|:.|                 ||.    |.|| 
Mouse   510 ICTLVIAESFPEDAGIFTCSATNDYGSVTSTAQLVITSANNENCSYDSTGEPNSDHFQHFPPPP- 573

  Fly  7842 FPLIESIGTESLSLSWKAPVWDGCSDITNYYVERREHPLSSWIRVGNTRFTSMAVSGLTPGKEYD 7906
             |::|: |:..|:....:.:....|....:.:...:...::..|..|....|..|:||..||.|.
Mouse   574 -PILET-GSYELASQKPSEIQQVNSPNLGFSMAALQMQFNTAERETNGVHPSHGVNGLINGKAYG 636

  Fly  7907 FRIFADNVYGRSDASDTSTLIKTKESVKKKPIERKWEIDANGRKLRGKADGPVKDYDSYVFDIYS 7971
                     .:|..:.|:.|..|||   ..|:..|.::|            |:|          .
Mouse   637 ---------NKSPPTPTALLSPTKE---PPPLLAKPKLD------------PLK----------L 667

  Fly  7972 KFVPQPVEISQQSVYDRYDILEEIGTGAF-----GVVHRCRERSTGNI----------------F 8015
            :.:...|.:.|::.             |:     ||  .|...|:|:.                .
Mouse   668 QQLQNQVRLEQEAC-------------AWPPAPPGV--PCNSSSSGSSAPPSPPFPPPPPAFPEL 717

  Fly  8016 AAKFIPVSHSVEKDLIRREIDIMNQLHHQKLINLHDAFEDDDEMILILEFLSGGELFERITAEGY 8080
            ||...||.                                             .|....:.:...
Mouse   718 AACASPVP---------------------------------------------SEPMSALASRAT 737

  Fly  8081 VMTEAEVINYMRQICEGIRHMHEQNIIHLDIKPENIMCQTRSSTNVKLID--------------- 8130
            .|..:...||.|.         :|.|...::.|.:.:....||.:...:.               
Mouse   738 AMQSSGSFNYARP---------KQFIAAQNLGPASGLPTPTSSPSSSSLPSPLSPTPRPFGRAPG 793

  Fly  8131 ---------FGLATRLDPNEVVKITTGTAEFAAPEIVN---------------REPVGFYTDMWA 8171
                     :|.::...|.....:.:.:|.:..|::..               ..|..|......
Mouse   794 PPFVEPEAMWGPSSPSPPPPPPPVFSPSAAYPVPDVFPLPPPPPPLPSSTSHCASPARFGPSQTP 858

  Fly  8172 TGVLSYVLLSGLSPFAGDNDVQTLKNVKACDWDFDVES---FKYISEEAKDFIRKLLVRNKEKRM 8233
            ...||.:|.|...|.| .|.:...|.|...  .|..:|   .:..|:|.....:..::::.|:::
Mouse   859 AAFLSALLPSQPPPVA-VNALGLPKGVTPA--GFPKKSSRTARIASDEEIQGTKDAVIQDLERKL 920

  Fly  8234 TAHECLLHPWLTGDHSAMKQEINRDRYLAYREKLRRKYEDFERFLLPIGRLSEYSSLRKLLMEKY 8298
            ...|.||:              |....|.|.|::.|:       ||.....:.::     :.|. 
Mouse   921 RFKEDLLN--------------NGQPRLTYEERMARR-------LLGADSANVFN-----IQEP- 958

  Fly  8299 KIHDAVFDRRQAAPRFVIRPSSQFCYEGQSVKFYCRCIAIATPTLTWSHNNIELRQSVKFMKRYV 8363
              .:...::...|||                      .::..|                      
Mouse   959 --EETAANQDAGAPR----------------------ASVGGP---------------------- 977

  Fly  8364 GDDYYFIINRVKLDDRGEYIIRAENHYGSREEVVFLNVQPLPKEQPRYRTESTPVRR-----REP 8423
                        ||.:.||.:      .|.|:.:...::        ||.|.:||..     ::|
Mouse   978 ------------LDGQKEYKV------SSCEQRLISEIE--------YRLERSPVDESGDEVQDP 1016

  Fly  8424 -LPYTFWQEESETAPSFTFLLRPRVMQARDTCKLLCCLSGKPVPNVRWYKDGRELS--KYEYAMT 8485
             :|.     |:.|||.|...|:...:.........|.::|.|.|.:.|:|||:::|  ...|.:.
Mouse  1017 DVPV-----ENATAPFFEMKLKHYKIFEGMPVTFTCRVAGNPKPKIYWFKDGKQISPKSDHYTIQ 1076

  Fly  8486 HS-DGVVTMEIIDCKPSDSGKYSCKATNCHGTDETDCVVIVEGEWVTPEQAQLAHNFLYSGDRKY 8549
            .. ||..::........|.|.|:..|.|                                     
Mouse  1077 RDLDGTCSLHTTASTLDDDGNYTIMAAN------------------------------------- 1104

  Fly  8550 IEQPIKPAPLPIVTSRQYTSSSVQNTSEPQG-----DKVNVSNSNSSGISNKKKYASNSLQAPGS 8609
                                        |||     .::.|...|..|.|.:........:.|.|
Mouse  1105 ----------------------------PQGRVSCTGRLMVQAVNQRGRSPRSPSGHPHARRPRS 1141

  Fly  8610 PSRSRSATKELILPPDDSLMCKPEFTKPLHDLTIHDGEQLILTCYVKGDPEPQISWSKNGKSL-- 8672
            .||......|    |......:|.|.:...|||:.:|:...:.|.|.|.|.|.:||..:||.:  
Mouse  1142 RSRDSGDENE----PIQERFFRPHFLQAPGDLTVQEGKLCRMDCKVSGLPTPDLSWQLDGKPIRP 1202

  Fly  8673 SSSDILDLRYKNGIATLTINEVFPEDEGVITCTATNSVGAVETKCKLTIQPLDKNINKRKVNAGD 8737
            .|:..:.:| :||:.:|.|..|...|.|:.||.|||..|......:|.:..  |..:|       
Mouse  1203 DSAHKMLVR-ENGVHSLIIEPVTSRDAGIYTCIATNRAGQNSFNLELVVAA--KEAHK------- 1257

  Fly  8738 NAPKIVSHLESRFVRDGDAVNLACRIIGAQHFDVVWLHNNKEIKPSKDFQYTNEANIYR------ 8796
             ||..:..|::..|.||..|.|.||:.|.....:.|...|:.:..|     |...::::      
Mouse  1258 -APVFMEKLQNTGVADGYPVRLECRVSGVPPPQIFWKKENESLTHS-----TERVSMHQDNHGYI 1316

  Fly  8797 -LQIAEIFPEDGGTYTCEAFNDIGESFSTCTINVTVPGDETKQPSFVKFPTSV-------SVLEG 8853
             |.|.....||.|.||..|.|:.|  ..:||..:.|.....:||...| |..|       :.|..
Mouse  1317 CLLIQGATKEDAGWYTVSAKNEAG--IVSCTARLDVYTQWHQQPQTTK-PKKVRPSASRYAALSD 1378

  Fly  8854 EGTTFECEIDSE 8865
            :|...:.....|
Mouse  1379 QGLDIKAAFQPE 1390

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
btNP_001162825.1 I-set 9..101 CDD:254352
Ig 26..100 CDD:143165
I-set 119..210 CDD:254352
Ig 136..209 CDD:143165
I-set 228..320 CDD:254352
IGc2 242..312 CDD:197706
I-set 335..425 CDD:254352
Ig 350..423 CDD:143165
Ig 436..530 CDD:299845
I-set 438..532 CDD:254352
I-set 545..636 CDD:254352
Ig 560..633 CDD:143165
Ig 657..731 CDD:143165
I-set 746..835 CDD:254352
Ig 1496..1586 CDD:299845
IG_like 1503..1588 CDD:214653
I-set 1639..1724 CDD:254352
IG 1750..1821 CDD:214652
IGc2 1750..1806 CDD:197706
I-set 1826..1909 CDD:254352
Ig 1831..1897 CDD:299845
I-set 1914..1998 CDD:254352
Ig 2020..2095 CDD:299845
FN3 2100..2194 CDD:238020
FN3 2203..2292 CDD:238020
I-set 2311..2395 CDD:254352
Ig 2321..2395 CDD:299845
FN3 2399..2493 CDD:238020
FN3 2501..2590 CDD:238020
I-set 2602..2693 CDD:254352
Ig 2619..2693 CDD:299845
FN3 2697..2793 CDD:238020
FN3 2801..2893 CDD:238020
I-set 2902..2995 CDD:254352
Ig 2919..2993 CDD:299845
FN3 2999..3088 CDD:238020
FN3 3102..3191 CDD:238020
I-set 3208..3292 CDD:254352
Ig 3219..3292 CDD:299845
FN3 3296..3390 CDD:238020
FN3 3400..3489 CDD:238020
I-set 3494..3590 CDD:254352
Ig 3516..3590 CDD:299845
FN3 3594..3682 CDD:238020
FN3 3694..3781 CDD:238020
I-set 3795..3885 CDD:254352
Ig 3813..3885 CDD:299845
FN3 3889..3980 CDD:238020
FN3 3990..4082 CDD:238020
I-set 4090..4181 CDD:254352
Ig 4108..4181 CDD:299845
FN3 4185..4271 CDD:238020
FN3 4285..4383 CDD:238020
Ig 4404..4480 CDD:299845
FN3 4484..4571 CDD:238020
FN3 4584..4677 CDD:238020
I-set 4685..4775 CDD:254352
Ig 4703..4775 CDD:299845
FN3 4779..4863 CDD:238020
FN3 4879..4970 CDD:238020
IG 4989..5069 CDD:214652
Ig 4996..5069 CDD:299845
FN3 5073..5166 CDD:238020
FN3 5175..5265 CDD:238020
I-set 5276..5366 CDD:254352
Ig 5293..5366 CDD:299845
FN3 5370..5462 CDD:238020
FN3 5470..5561 CDD:238020
Ig 5559..5654 CDD:299845
I-set 5570..5660 CDD:254352
FN3 5664..5755 CDD:238020
FN3 5764..5853 CDD:238020
I-set 5865..5954 CDD:254352
Ig 5882..5954 CDD:299845
FN3 5958..6049 CDD:238020
FN3 6062..6153 CDD:238020
I-set 6173..6255 CDD:254352
Ig_Titin_like 6182..6255 CDD:143225
FN3 6259..6350 CDD:238020
FN3 6359..6451 CDD:238020
FN3 6470..6552 CDD:238020
I-set 6564..6650 CDD:254352
Ig_Titin_like 6577..6650 CDD:143225
FN3 6654..6745 CDD:238020
FN3 6754..6840 CDD:238020
I-set 6855..6946 CDD:254352
Ig 6874..6946 CDD:299845
FN3 6950..7042 CDD:238020
FN3 7050..7139 CDD:238020
FN3 7151..7237 CDD:238020
I-set 7254..7334 CDD:254352 5/20 (25%)
Ig 7272..7339 CDD:143165 6/25 (24%)
IG_like 7354..7440 CDD:214653 15/90 (17%)
Ig 7366..7440 CDD:299845 12/78 (15%)
FN3 7444..7531 CDD:238020 20/94 (21%)
FN3 7545..7637 CDD:238020 10/91 (11%)
I-set 7648..7737 CDD:254352 25/89 (28%)
Ig 7665..7734 CDD:143165 21/69 (30%)
Ig 7760..7833 CDD:299845 20/80 (25%)
FN3 7837..7927 CDD:238020 19/89 (21%)
STKc_Twitchin_like 7986..8244 CDD:271016 43/320 (13%)
S_TKc 7989..8244 CDD:214567 43/317 (14%)
Ig 8311..8394 CDD:299845 9/82 (11%)
I-set 8312..8401 CDD:254352 9/88 (10%)
I-set 8437..8525 CDD:254352 20/90 (22%)
Ig 8455..8519 CDD:143165 17/66 (26%)
I-set 8632..8721 CDD:254352 31/90 (34%)
IGc2 8646..8711 CDD:197706 24/66 (36%)
I-set 8740..8831 CDD:254352 26/97 (27%)
Ig 8757..8826 CDD:143165 19/75 (25%)
I-set 8839..8922 CDD:254352 7/34 (21%)
Ig 8845..>8909 CDD:299845 5/28 (18%)
PalldNP_001280701.1 I-set 278..368 CDD:369462 25/89 (28%)
I-set 448..545 CDD:369462 25/97 (26%)
I-set 1026..1117 CDD:369462 23/155 (15%)
I-set 1160..1250 CDD:369462 31/90 (34%)
Ig_Palladin_C 1276..1350 CDD:143301 21/80 (26%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167847407
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.930

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