DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment bt and TRIO

DIOPT Version :9

Sequence 1:NP_001162825.1 Gene:bt / 43814 FlyBaseID:FBgn0005666 Length:8933 Species:Drosophila melanogaster
Sequence 2:NP_009049.2 Gene:TRIO / 7204 HGNCID:12303 Length:3097 Species:Homo sapiens


Alignment Length:2079 Identity:404/2079 - (19%)
Similarity:650/2079 - (31%) Gaps:806/2079 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly  6479 W--RPPRTDGKSRIKGYYVEMRPKNGKDW-KTVNDIPINSTVYTVPSLKEGEEYSFRVVAENEVG 6540
            |  |.|.:|.|..:|...:|    |.:|| |.:.::....|::...:|||.........|..:.|
Human  1558 WVGRTPTSDNKIVLKASSIE----NKQDWIKHIREVIQERTIHLKGALKEPIHIPKTAPATRQKG 1618

  Fly  6541 RSDPSK-------PSQPITIEEQPNKPCMELGKVRDIVCRAGDDFSIHVPYLAFPKPNAFWYSND 6598
            |.|...       .|||.||               .|..|                      ::.
Human  1619 RRDGEDLDSQGDGSSQPDTI---------------SIASR----------------------TSQ 1646

  Fly  6599 NMLDDNNRVHKHLTDDAASVVVKNSKRADSGQYRLQLKNTSGFDTATINVRVLDRP--SPPTRL- 6660
            |.||.:    |.......:||:.:....:|.:..::...|         |.||:||  .|...| 
Human  1647 NTLD
SD----KLSGGCELTVVIHDFTACNSNELTIRRGQT---------VEVLERPHDKPDWCLV 1698

  Fly  6661 RADEFSGDSLTLYWNPPNDDGGSAIQNYIIEKKEARSSTWSKVSSFCTVPFVRIRNLVLNKEYDF 6725
            |..:.|          |..:|.....:..|  ..:|||             :.:..:..:|  |.
Human  1699 RTTDRS----------PAAEGLVPCGSLCI--AHSRSS-------------MEMEGIFNHK--DS 1736

  Fly  6726 RVIAENKYGQSDPANTSEPILARHPFDIPNTPGIPHGIDSTEDSITIAWTKPKHDGG-------S 6783
            ..::.|  ..|.||:.:.  |..|.....::||                  ||..|.       |
Human  1737 LSVSSN--DASPPASVAS--LQPHMIGAQSSPG------------------PKRPGNTLRKWLTS 1779

  Fly  6784 PI--------TGYIIEKRLLSDDKWTKAVHALC-------PDLSCKIPNLIENAEYEFRVAAVNA 6833
            |:        .|::  |:|....|.::.|....       .|.|...|. .|..|...|...: :
Human  1780 PVRRLSSGKADGHV--KKLAHKHKKSREVRKSADAGSQKDSDDSAATPQ-DETVEERGRNEGL-S 1840

  Fly  6834 AGQSAYSGSSDLIFCRRPPHAPKITSDLSIRDMTVIAGDEFRITVPYHASPRPTASWSLNGLEVI 6898
            :|..:.|.||.:..|...                  .|:|....||.   |.|.|        :.
Human  1841 SGTLSKSSSSGMQSCGEE------------------EGEEGADAVPL---PPPMA--------IQ 1876

  Fly  6899 PGERIKFDSNDYASMYYNKSAKRDETGSYTITLTNNKGSDTASC-------------HVTVVDRP 6950
            ....::.||.|      :|::.|        .|.....|:|.|.             .:.:.|||
Human  1877 QHSLLQPDSQD------DKASSR--------LLVRPTSSETPSAAELVSAIEELVKSKMALEDRP 1927

  Fly  6951 ---LPPQGPLNAYDITP-DTCTLAWKTPLDDGGSPITNYVVEKLDNSGSWVKISSFVRNTHYDVM 7011
               |..||..::....| |...|:..:|:|:         :|:        :.||.::..||.:.
Human  1928 SSLLVDQGDSSSPSFNPSDNSLLSSSSPIDE---------MEE--------RKSSSLKRRHYVLQ 1975

  Fly  7012 GLEPHYKYNFRVRAENQYGLSDPLDIIEPIVA-KHQFTVPDE-PGQPKVIDWDSGNVTLI--WTR 7072
            .|         |..|..| :.|...::|..:| ..:..|||: .|:.|::   .||:..|  |.|
Human  1976 EL---------VETERDY-VRDLGYVVEGYMALMKEDGVPDDMKGKDKIV---FGNIHQIYDWHR 2027

  Fly  7073 PLSDG------------GS-------RIQGYQIEYRDILNDSSWNAYDYI---IKDTKYQLYNLI 7115
            ....|            ||       |:..| |.|......|.....:||   .:|.|.:|.:.:
Human  2028 DFFLGELEKCLEDPEKLGSLFVKHERRLHMY-IAYCQNKPKSEHIVSEYIDTFFEDLKQRLGHRL 2091

  Fly  7116 NGSEYEFRIKAKNAAGLSKPSSPSLRFKLKGKFTVPSPPGAPQVTRVGKNYVDLKWEKPLRDGGS 7180
            ..::.           |.||....::::|                 :.|::  ||:.|...    
Human  2092 QLTDL-----------LIKPVQRIMKYQL-----------------LLKDF--LKYSKKAS---- 2122

  Fly  7181 RITGYIIERRDIGGAVWV------KCNDYNVLDTEYTVMNLIEMGDYEFRVFAVNSAGRSEPSLC 7239
                  ::..::..||.|      :|||         :||:..:..::.::.|.......:..|.
Human  2123 ------LDTSELERAVEVMCIVPRRCND---------MMNVGRLQGFDGKIVAQGKLLLQDTFLV 2172

  Fly  7240 T------MP-------------IKVCEVLGGKK----PDWITRLQDKVAPFGKDYTLQ---C--- 7275
            |      :|             :...|.|..||    |.::.:...||:....:..::   |   
Human  2173 TDQDAGLLPRCRERRIFLFEQIVIFSEPLDKKKGFSMPGFLFKNSIKVSCLCLEENVENDPCKFA 2237

  Fly  7276 -------------AASGKPSPTARWLRNGKEIQMN----------------------GGRMTCDS 7305
                         ..|..||....|:....:|..|                      ||..:..|
Human  2238 LTSRTGDVVETFILHSSSPSVRQTWIHEINQILENQRNFLNALTSPIEYQRNHSGGGGGGGSGGS 2302

  Fly  7306 KDGVFRLHISNVQTGDDGDYTCEAMNSLGFVNTSGYLKIGSPPIINRC-PSELKLPEGDNSKIKI 7369
            ..|           |..|.   ....|.|..::.|....|..|..:|. ||.:..|         
Human  2303 GGG-----------GGSGG---GGAPSGGSGHSGGPSSCGGAPSTSRSRPSRIPQP--------- 2344

  Fly  7370 FYSGDQPLTVILKKNNEVICDSNDDTHVKVNIFDDYVAIYIRN---IVKSDGGPYQIEFTNESGS 7431
                                                    :|:   ::.|.....|.|....||:
Human  2345 ----------------------------------------VRHHPPVLVSSAASSQAEADKMSGT 2369

  Fly  7432 ATGEFYVHITGMPSAP-------TGPMGISYINKNSCMLNWRPPSYD--GGLKVSHYVIERKDVS 7487
            :|..        ||.|       .||...|.          |||..|  |..:.:..:.:.|.:.
Human  2370 STPG--------PSLPPPGAAPEAGPSAPSR----------RPPGADAEGSEREAEPIPKMKVLE 2416

  Fly  7488 SPHWITVSSTCKDTAFNVQGLIENQEYIFRVMAVNENGMGP------------------------ 7528
            ||                           |..|.|.:|..|                        
Human  2417 SP---------------------------RKGAANASGSSPDAPAKDARASLGTLPLGKPRAGAA 2454

  Fly  7529 -----PLEGLNPIRAKDPIDPPSP-----------PGSPQIT----EIGGDFVHLEWEKP----- 7568
                 ||....|...|:|..|.||           |.||...    ...||...|:.:.|     
Human  2455 SPLNSPLSSAVPSLGKEPFPPSSPLQKGGSFWSSIPASPASRPGSFTFPGDSDSLQRQTPRHAAP 2519

  Fly  7569 --------------------------ESDGGAHIQGYWIDK-----REVGSNTWQRVNATICAAN 7602
                                      ||...::|....:..     :|...|.:|.....|.|:|
Human  2520 GKDTDRMSTCSSASEQSVQSTQSNGSESSSSSNISTMLVTHDYTAVKEDEINVYQGEVVQILASN 2584

  Fly  7603 QINCINLIEGRQYEFRIFAQNVAGLSTESSASQAVKIIDPQAAS-PPLIVKPLRDANCIQNHNAQ 7666
            |.|.          |.:|         .::..|.     |.|.. .|..|.....|..::|.   
Human  2585 QQNM----------FLVF---------RAATDQC-----PAAEGWIPGFVLGHTSAVIVENP--- 2622

  Fly  7667 FTCTINGVPKPTISWY-------KGAREISNGARYHMYSEG--DNHFLNINDVFGEDADEYVCRA 7722
                 :|..|.:.||:       |..::..:|.|     ||  :|                    
Human  2623 -----DGTLKKSTSWHTALRLRKKSEKKDKDGKR-----EGKLEN-------------------- 2657

  Fly  7723 VNKAGAKSTRATLAIMTAPKL-------NVPPRF---RDTAYFDKGENVVIKIPFTGFPKPRIHW 7777
                |.:.:|..|:...:.||       :|||.|   ......:.||.||::....|.||..|.|
Human  2658 ----GYRKSREGLSNKVSVKLLNPNYIYDVPPEFVIPLSEVTCETGETVVLRCRVCGRPKASITW 2718

  Fly  7778 VRDGEN-IESGGHYTVEVKE-RHAVLIIRDGSHLDSGPYRITAENELGSDTAIIQVQISDRPDPP 7840
            .....| :.:.|||::...: ..|.|.|...:..|.|.|...|.|::||.::...:::.      
Human  2719 KGPEHNTLNNDGHYSISYSDLGEATLKIVGVTTEDDGIYTCIAVNDMGSASSSASLRVL------ 2777

  Fly  7841 RFPLIESIGTESLSLSWKAPVWDGCSDITNYYVERREHPLSSWIRVGNTRFTSMAVSGLTPGKEY 7905
                  ..|.:.:.::||                                               
Human  2778 ------GPGMDGIMVTWK----------------------------------------------- 2789

  Fly  7906 DFRIFADNVYGRSDASDTSTLIKTKESVKKKPIERKWEIDANGRKLRGKADGPVKDYDSYVFDIY 7970
                  ||                                                :||:     
Human  2790 ------DN------------------------------------------------FDSF----- 2795

  Fly  7971 SKFVPQPVEISQQSVYDRYDILEEIGTGAFGVVHRCRERSTGNIFAAKFIPVSHSVEKDLIRREI 8035
                              |..:.|:|.|.|.||.:|.::.|....|.||:. ...:::|.:..|:
Human  2796 ------------------YSEVAELGRGRFSVVKKCDQKGTKRAVATKFVN-KKLMKRDQVTHEL 2841

  Fly  8036 DIMNQLHHQKLINLHDAFEDDDEMILILEFLSGGELFERITAEGYVMTEAEVINYMRQICEGIRH 8100
            .|:..|.|..|:.|.|.||.....||:||....|.|.:.:...| .:||.::..::.::.|.:|:
Human  2842 GILQSLQHPLLVGLLDTFETPTSYILVLEMADQGRLLDCVVRWG-SLTEGKIRAHLGEVLEAVRY 2905

  Fly  8101 MHEQNIIHLDIKPENIMC-QTRSSTNVKLIDFGLATRLDPNEVVKITTGTAEFAAPEIVNREPVG 8164
            :|...|.|||:|||||:. ::.:...:||.|||.|.:|:....:....|..|||||||:...||.
Human  2906 LHNCRIAHLDLKPENILVDESLAKPTIKLADFGDAVQLNTTYYIHQLLGNPEFAAPEIILGNPVS 2970

  Fly  8165 FYTDMWATGVLSYVLLSGLSPFAGDNDVQTLKNVKACDWDFDVESFKYISEEAKDFIRKLLVRNK 8229
            ..:|.|:.|||:||||||:|||..|:..:|..|:...|:.|..:.||.:|::||:|:..||..:.
Human  2971 LTSDTWSVGVLTYVLLSGVSPFLDDSVEETCLNICRLDFSFPDDYFKGVSQKAKEFVCFLLQEDP 3035

  Fly  8230 EKRMTAHECLLHPWLTGDHSAMKQEINRDRYLAYREKLRRKYEDFERFLLPIGRLSEYSSLRKL 8293
            .||.:|...|...||...:......::..|..::.|  |||:::..|   ||..:..:...|.|
Human  3036 AKRPSAALALQEQWLQAGNGRSTGVLDTSRLTSFIE--RRKHQNDVR---PIRSIKNFLQSRLL 3094

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
btNP_001162825.1 I-set 9..101 CDD:254352
Ig 26..100 CDD:143165
I-set 119..210 CDD:254352
Ig 136..209 CDD:143165
I-set 228..320 CDD:254352
IGc2 242..312 CDD:197706
I-set 335..425 CDD:254352
Ig 350..423 CDD:143165
Ig 436..530 CDD:299845
I-set 438..532 CDD:254352
I-set 545..636 CDD:254352
Ig 560..633 CDD:143165
Ig 657..731 CDD:143165
I-set 746..835 CDD:254352
Ig 1496..1586 CDD:299845
IG_like 1503..1588 CDD:214653
I-set 1639..1724 CDD:254352
IG 1750..1821 CDD:214652
IGc2 1750..1806 CDD:197706
I-set 1826..1909 CDD:254352
Ig 1831..1897 CDD:299845
I-set 1914..1998 CDD:254352
Ig 2020..2095 CDD:299845
FN3 2100..2194 CDD:238020
FN3 2203..2292 CDD:238020
I-set 2311..2395 CDD:254352
Ig 2321..2395 CDD:299845
FN3 2399..2493 CDD:238020
FN3 2501..2590 CDD:238020
I-set 2602..2693 CDD:254352
Ig 2619..2693 CDD:299845
FN3 2697..2793 CDD:238020
FN3 2801..2893 CDD:238020
I-set 2902..2995 CDD:254352
Ig 2919..2993 CDD:299845
FN3 2999..3088 CDD:238020
FN3 3102..3191 CDD:238020
I-set 3208..3292 CDD:254352
Ig 3219..3292 CDD:299845
FN3 3296..3390 CDD:238020
FN3 3400..3489 CDD:238020
I-set 3494..3590 CDD:254352
Ig 3516..3590 CDD:299845
FN3 3594..3682 CDD:238020
FN3 3694..3781 CDD:238020
I-set 3795..3885 CDD:254352
Ig 3813..3885 CDD:299845
FN3 3889..3980 CDD:238020
FN3 3990..4082 CDD:238020
I-set 4090..4181 CDD:254352
Ig 4108..4181 CDD:299845
FN3 4185..4271 CDD:238020
FN3 4285..4383 CDD:238020
Ig 4404..4480 CDD:299845
FN3 4484..4571 CDD:238020
FN3 4584..4677 CDD:238020
I-set 4685..4775 CDD:254352
Ig 4703..4775 CDD:299845
FN3 4779..4863 CDD:238020
FN3 4879..4970 CDD:238020
IG 4989..5069 CDD:214652
Ig 4996..5069 CDD:299845
FN3 5073..5166 CDD:238020
FN3 5175..5265 CDD:238020
I-set 5276..5366 CDD:254352
Ig 5293..5366 CDD:299845
FN3 5370..5462 CDD:238020
FN3 5470..5561 CDD:238020
Ig 5559..5654 CDD:299845
I-set 5570..5660 CDD:254352
FN3 5664..5755 CDD:238020
FN3 5764..5853 CDD:238020
I-set 5865..5954 CDD:254352
Ig 5882..5954 CDD:299845
FN3 5958..6049 CDD:238020
FN3 6062..6153 CDD:238020
I-set 6173..6255 CDD:254352
Ig_Titin_like 6182..6255 CDD:143225
FN3 6259..6350 CDD:238020
FN3 6359..6451 CDD:238020
FN3 6470..6552 CDD:238020 22/82 (27%)
I-set 6564..6650 CDD:254352 11/85 (13%)
Ig_Titin_like 6577..6650 CDD:143225 9/72 (13%)
FN3 6654..6745 CDD:238020 17/93 (18%)
FN3 6754..6840 CDD:238020 19/107 (18%)
I-set 6855..6946 CDD:254352 16/103 (16%)
Ig 6874..6946 CDD:299845 14/84 (17%)
FN3 6950..7042 CDD:238020 20/95 (21%)
FN3 7050..7139 CDD:238020 25/113 (22%)
FN3 7151..7237 CDD:238020 13/91 (14%)
I-set 7254..7334 CDD:254352 17/120 (14%)
Ig 7272..7339 CDD:143165 15/107 (14%)
IG_like 7354..7440 CDD:214653 10/88 (11%)
Ig 7366..7440 CDD:299845 7/76 (9%)
FN3 7444..7531 CDD:238020 20/124 (16%)
FN3 7545..7637 CDD:238020 23/142 (16%)
I-set 7648..7737 CDD:254352 17/97 (18%)
Ig 7665..7734 CDD:143165 12/77 (16%)
Ig 7760..7833 CDD:299845 21/74 (28%)
FN3 7837..7927 CDD:238020 5/89 (6%)
STKc_Twitchin_like 7986..8244 CDD:271016 91/258 (35%)
S_TKc 7989..8244 CDD:214567 91/255 (36%)
Ig 8311..8394 CDD:299845
I-set 8312..8401 CDD:254352
I-set 8437..8525 CDD:254352
Ig 8455..8519 CDD:143165
I-set 8632..8721 CDD:254352
IGc2 8646..8711 CDD:197706
I-set 8740..8831 CDD:254352
Ig 8757..8826 CDD:143165
I-set 8839..8922 CDD:254352
Ig 8845..>8909 CDD:299845
TRIONP_009049.2 SEC14 69..204 CDD:214706
SPEC 230..445 CDD:238103
Spectrin 1 311..418
SPEC 341..566 CDD:238103
Spectrin 2 538..644
SPEC 567..783 CDD:238103
SPEC 787..1014 CDD:238103
Spectrin 3 878..984
SPEC 908..1137 CDD:238103
Spectrin 4 1109..1216
SPEC 1143..1243 CDD:197544
RhoGEF 1295..1465 CDD:238091
PH1_Kalirin_Trio_like 1472..1594 CDD:270060 11/39 (28%)
PH 1505..1590 CDD:278594 11/35 (31%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1601..1650 15/85 (18%)
SH3_Kalirin_1 1659..1718 CDD:212786 15/77 (19%)
SH3-RhoG_link 1715..1972 CDD:293215 65/359 (18%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1779..1906 33/173 (19%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1927..1965 10/54 (19%)
RhoGEF 1970..2143 CDD:238091 43/226 (19%)
PH2_Kalirin_Trio_p63RhoGEF 2148..2286 CDD:270061 18/137 (13%)
PH 2175..2271 CDD:278594 14/95 (15%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 2287..2552 58/372 (16%)
SH3_Kalirin_2 2555..2613 CDD:212787 15/81 (19%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 2639..2660 7/49 (14%)
I-set 2685..2776 CDD:254352 25/90 (28%)
Ig 2699..2776 CDD:299845 23/76 (30%)
STKc_Trio_C 2788..3050 CDD:271015 97/387 (25%)
S_TKc 2796..3050 CDD:214567 91/255 (36%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

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