DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment bt and lama1

DIOPT Version :9

Sequence 1:NP_001162825.1 Gene:bt / 43814 FlyBaseID:FBgn0005666 Length:8933 Species:Drosophila melanogaster
Sequence 2:NP_001030158.1 Gene:lama1 / 569971 ZFINID:ZDB-GENE-060118-1 Length:3075 Species:Danio rerio


Alignment Length:1098 Identity:185/1098 - (16%)
Similarity:373/1098 - (33%) Gaps:280/1098 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   674 YKETSTVKESKRHV-----------YQVEQTKEGEFAVKLEINDVEESDKGAYK-----LVASNE 722
            |.:..|::...|.:           ||:...:|....:..:|.|:::..:..::     |:.|.:
Zfish  1591 YSQLMTIQNQTRELTSLMSWNQTPDYQLTAGEEHSRNLSGQITDLQQQVQSVFEDSGDVLLTSEQ 1655

  Fly   723 KGEAVSQIVNLVDIPEEERKPCKPEIS--RKLADQKVAESKTFELLVSLSQTDRKCKVEWYKGST 785
            :.....|::.|::...........::|  ....|:.:.|:.:..||...|:|             
Zfish  1656 RFTQGKQLLELINNIHSAIHGLVEQVSSVNVTLDEGLDEANSTFLLEETSET------------- 1707

  Fly   786 VIRETKDITTTFDGTTARLTFSSA-------RTEHTSNYKVIVTNEVGKDESSCKITVEKVAKKK 843
             :.:.:....|.....|.:..|||       ..|.:..|:   .|::.::..|..:....::.::
Zfish  1708 -LEKIRSFNLTHCRNAAEIQLSSAVSVLEKVEDEISKPYR---NNQIRRENISTTLNTHNLSLQQ 1768

  Fly   844 EEKPKEKEKTKNEKEVEQKEMEEDKNESGQSVAQTEGRINIE--------QISEGDP--KEELTV 898
            .::.....||.|.   :.:.:.:|...:..::  |..|.|:.        |:.|...  .:.|.:
Zfish  1769 VQESLYTAKTHNN---QSRRLLQDIQSNTHTL--TISRNNVSSLNHELETQVQEAQDLLTDALNI 1828

  Fly   899 KEEILDKRDTQEVKESSVELQDSAGHEVPEPKKATSDSKLDQSNQKNLDKKHKTDQSESKTNKNV 963
            .|::.:...|.:..::.:||..      |..:|......:|.:.:..|...::.:......:|. 
Zfish  1829 AEDMDNGATTLDELKNDLELWS------PSLRKHVDSLVMDLTKRDALQLVYRAEDHAQALSKQ- 1886

  Fly   964 SLAEPIKSNKQESEEQQATEQIGLKKVDRKASIVSVKEEISSDVRRKSTIKAKEEITVDDKKASS 1028
              |:.:.|:              |.:|...:..:|:....::::|....:.|...:..:...:|:
Zfish  1887 --AQALNSS--------------LSEVSSASVNISIATRTNANIRENIQLAADLALAANQNASSA 1935

  Fly  1029 -RRSSLAVEESNTESRRSSIIDKKPLEQVDNKPIDANKNPQPLKEEIPRLKPAEKRRTSKVIEEP 1092
             ..:||..:|.....:.|.|:|:..|  :.|......:|...:...:..:....:..|..:.|..
Zfish  1936 LNMTSLTEQEKRRLQKSSEILDRAAL--LKNHTDGLMQNVSAVTSRLSLVAANIQNFTQMLPEAL 1998

  Fly  1093 KPDEGLPKLRKASIAQVKEEAKPAAPKLKAKAKAKPKYEELPEIPDYERPQLEKYEKSDFTPSDF 1157
            .....||:..:|.|.|||::.:.|...|:         |.|..:.||   :|:..|.|.      
Zfish  1999 GILRNLPEGSRAEILQVKQQTEAANASLQ---------EALERLRDY---RLKLDESSS------ 2045

  Fly  1158 ARDLEIPNKMEKPIIDSGKKEPAVLAQKNGIPKKTDIIEQYADEPKGLKVGKGKLPDEGDGRDGA 1222
                                  |:.:..|...:...::....|...    ..|....|.|     
Zfish  2046 ----------------------ALGSADNSTQRTNQLLRDSQDTAN----AAGSRLSEAD----- 2079

  Fly  1223 VLKPVIIEPEKEILDLGNKKNNQHADKPTVLDIIKQRRR---------SSIRNLMT--KEPIQNE 1276
            |....::|..|.:..||...:...:|   :.::|.|.|:         |:.||.:.  :..:.:.
Zfish  2080 VKADRLLERLKPLQTLGETLSRNLSD---IRELISQARKQAASIKVAVSADRNCVRAYRPEVTSS 2141

  Fly  1277 SFLGVVLKPVIKDTREQAAPQQAIQLTKANATEQFSPTKAVKAQVADLKKPETLATLEDNYERPV 1341
            :|..:.|      |.:.:.|...:....::::|.|...:....:|:      .|......:.|  
Zfish  2142 NFNTLTL------TMKTSEPDNLLFYMGSSSSEDFMALEMHDGKVS------FLWDAGSGHNR-- 2192

  Fly  1342 LEKYDPFSIDKTKSEKSTPSIITPDIRGPEVKLPVQETKEEKQKVPKMQPPAPGDPPKIEVIR-- 1404
            || |....|:..|..:     |.....|....|.||:|  :.:.:|.::..|.|....::|.:  
Zfish  2193 LE-YPDVQINNDKWHR-----INATRFGRHATLTVQQT--DSEPLPAVKSSAAGSATVMDVNKHT 2249

  Fly  1405 ---------EKRPSLAPEPPSRRGSLIPPADTGRRPSLIINDEKKLRPGEV-MDTRLLRPGEVGE 1459
                     :.:.|.|.:....||.:               .|..|....: :.....|.||.|.
Zfish  2250 WVYVGGLGGQVKKSPAVKITHFRGCM---------------GEALLNENNIGLWNYAERQGECGG 2299

  Fly  1460 GQRRRPSIDVRRPSVQDLEDLINKPSTPLRDVGDGGPPSIVDVQESYSVVEDSTAYLTVGVEGSP 1524
                    ..|.|..:|         |.....|.|           :||||.|...::..|    
Zfish  2300 --------CFRSPRTED---------TSFHFDGSG-----------FSVVEKSLRSMSTSV---- 2332

  Fly  1525 APTFKFYKGVSEILEGGRFKFLTDGQTNTITLCMRKCKPNDESKYKIVVSNIH-----GEDSAEM 1584
               ..|:|.:|   ..|...:|....|            .|....::|...:|     |..:..|
Zfish  2333 ---VMFFKTLS---PNGLLLYLASNGT------------RDFLSIELVEGKVHLTFELGSGALTM 2379

  Fly  1585 QLYVSDSSGMDFRAMLK--KRRYQKWDKDEQDPNWGDLKETEKP------------------LPA 1629
            ....:.::|..:|..|:  ||:.........:|:..::.|.|.|                  |||
Zfish  2380 TSSRTYNTGSWYRIALQRNKRKGHLSVMAASNPSEREVLEAEAPGQASDLNRSDLDPIYIGGLPA 2444

  Fly  1630 LKKVERKV--ESFLSPLID-QFAKEGKDKKVVFEARFSKPNC--KPKWLFRKDEVFTG 1682
            .:.:.|:|  .||:..:.: :.|:...|  ::.||...|..|  ||   .|...||.|
Zfish  2445 SRPIRRQVVARSFVGCMKNVEIARTNFD--LLREAYGVKKGCVLKP---IRSVSVFGG 2497

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
btNP_001162825.1 I-set 9..101 CDD:254352
Ig 26..100 CDD:143165
I-set 119..210 CDD:254352
Ig 136..209 CDD:143165
I-set 228..320 CDD:254352
IGc2 242..312 CDD:197706
I-set 335..425 CDD:254352
Ig 350..423 CDD:143165
Ig 436..530 CDD:299845
I-set 438..532 CDD:254352
I-set 545..636 CDD:254352
Ig 560..633 CDD:143165
Ig 657..731 CDD:143165 11/72 (15%)
I-set 746..835 CDD:254352 16/97 (16%)
Ig 1496..1586 CDD:299845 17/94 (18%)
IG_like 1503..1588 CDD:214653 17/89 (19%)
I-set 1639..1724 CDD:254352 14/47 (30%)
IG 1750..1821 CDD:214652
IGc2 1750..1806 CDD:197706
I-set 1826..1909 CDD:254352
Ig 1831..1897 CDD:299845
I-set 1914..1998 CDD:254352
Ig 2020..2095 CDD:299845
FN3 2100..2194 CDD:238020
FN3 2203..2292 CDD:238020
I-set 2311..2395 CDD:254352
Ig 2321..2395 CDD:299845
FN3 2399..2493 CDD:238020
FN3 2501..2590 CDD:238020
I-set 2602..2693 CDD:254352
Ig 2619..2693 CDD:299845
FN3 2697..2793 CDD:238020
FN3 2801..2893 CDD:238020
I-set 2902..2995 CDD:254352
Ig 2919..2993 CDD:299845
FN3 2999..3088 CDD:238020
FN3 3102..3191 CDD:238020
I-set 3208..3292 CDD:254352
Ig 3219..3292 CDD:299845
FN3 3296..3390 CDD:238020
FN3 3400..3489 CDD:238020
I-set 3494..3590 CDD:254352
Ig 3516..3590 CDD:299845
FN3 3594..3682 CDD:238020
FN3 3694..3781 CDD:238020
I-set 3795..3885 CDD:254352
Ig 3813..3885 CDD:299845
FN3 3889..3980 CDD:238020
FN3 3990..4082 CDD:238020
I-set 4090..4181 CDD:254352
Ig 4108..4181 CDD:299845
FN3 4185..4271 CDD:238020
FN3 4285..4383 CDD:238020
Ig 4404..4480 CDD:299845
FN3 4484..4571 CDD:238020
FN3 4584..4677 CDD:238020
I-set 4685..4775 CDD:254352
Ig 4703..4775 CDD:299845
FN3 4779..4863 CDD:238020
FN3 4879..4970 CDD:238020
IG 4989..5069 CDD:214652
Ig 4996..5069 CDD:299845
FN3 5073..5166 CDD:238020
FN3 5175..5265 CDD:238020
I-set 5276..5366 CDD:254352
Ig 5293..5366 CDD:299845
FN3 5370..5462 CDD:238020
FN3 5470..5561 CDD:238020
Ig 5559..5654 CDD:299845
I-set 5570..5660 CDD:254352
FN3 5664..5755 CDD:238020
FN3 5764..5853 CDD:238020
I-set 5865..5954 CDD:254352
Ig 5882..5954 CDD:299845
FN3 5958..6049 CDD:238020
FN3 6062..6153 CDD:238020
I-set 6173..6255 CDD:254352
Ig_Titin_like 6182..6255 CDD:143225
FN3 6259..6350 CDD:238020
FN3 6359..6451 CDD:238020
FN3 6470..6552 CDD:238020
I-set 6564..6650 CDD:254352
Ig_Titin_like 6577..6650 CDD:143225
FN3 6654..6745 CDD:238020
FN3 6754..6840 CDD:238020
I-set 6855..6946 CDD:254352
Ig 6874..6946 CDD:299845
FN3 6950..7042 CDD:238020
FN3 7050..7139 CDD:238020
FN3 7151..7237 CDD:238020
I-set 7254..7334 CDD:254352
Ig 7272..7339 CDD:143165
IG_like 7354..7440 CDD:214653
Ig 7366..7440 CDD:299845
FN3 7444..7531 CDD:238020
FN3 7545..7637 CDD:238020
I-set 7648..7737 CDD:254352
Ig 7665..7734 CDD:143165
Ig 7760..7833 CDD:299845
FN3 7837..7927 CDD:238020
STKc_Twitchin_like 7986..8244 CDD:271016
S_TKc 7989..8244 CDD:214567
Ig 8311..8394 CDD:299845
I-set 8312..8401 CDD:254352
I-set 8437..8525 CDD:254352
Ig 8455..8519 CDD:143165
I-set 8632..8721 CDD:254352
IGc2 8646..8711 CDD:197706
I-set 8740..8831 CDD:254352
Ig 8757..8826 CDD:143165
I-set 8839..8922 CDD:254352
Ig 8845..>8909 CDD:299845
lama1NP_001030158.1 LamNT 25..275 CDD:214532
EGF_Lam 277..324 CDD:238012
EGF_Lam <364..390 CDD:238012
Laminin_EGF 404..463 CDD:278482
Laminin_EGF 461..506 CDD:278482
Laminin_B 571..699 CDD:278481
EGF_Lam 744..792 CDD:238012
Laminin_EGF 809..849 CDD:278482
EGF_Lam 851..903 CDD:238012
Laminin_EGF 905..951 CDD:278482
Laminin_EGF 954..1001 CDD:278482
EGF_Lam 1000..1045 CDD:238012
Laminin_EGF 1047..1095 CDD:278482
Laminin_EGF 1093..1149 CDD:278482
Laminin_B 1221..1346 CDD:278481
EGF_Lam <1365..1385 CDD:238012
Laminin_EGF 1407..1453 CDD:278482
Laminin_EGF 1456..1509 CDD:278482
Laminin_EGF 1512..>1549 CDD:278482
Laminin_I 1580..1842 CDD:283627 40/272 (15%)
Baculo_PEP_C 1581..1711 CDD:282382 19/133 (14%)
Laminin_II 2015..2148 CDD:283628 30/184 (16%)
LamG 2133..2281 CDD:238058 29/184 (16%)
LamG 2310..2466 CDD:238058 35/188 (19%)
LamG 2491..2641 CDD:238058 3/7 (43%)
Laminin_G_1 2750..2877 CDD:278483
LamG 2897..3048 CDD:238058
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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