DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment bt and Cntn3

DIOPT Version :9

Sequence 1:NP_001162825.1 Gene:bt / 43814 FlyBaseID:FBgn0005666 Length:8933 Species:Drosophila melanogaster
Sequence 2:NP_062202.1 Gene:Cntn3 / 54279 RGDID:3253 Length:1028 Species:Rattus norvegicus


Alignment Length:1226 Identity:247/1226 - (20%)
Similarity:413/1226 - (33%) Gaps:385/1226 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly  1481 INKPSTPLRDVGDGGPPSIVDVQESYSVVEDSTAYLTVGVEGSPAPTFKFYKGVSEI-------- 1537
            :.:||..:..||.                ||....|.....|:|:|.:::....|:|        
  Rat    29 VKEPSNSIFPVGS----------------EDKKITLNCEARGNPSPHYRWQLNGSDIDTSLDHRY 77

  Fly  1538 -LEGGRFKFLTDGQTNTITLCMRKCKPNDESKYKIVVSNIHGEDSAEMQLYVSDSSGMDFRAMLK 1601
             |.||..                           ||::.....|:...|.:.::|.|....    
  Rat    78 KLNGGNL---------------------------IVINPNRNWDTGSYQCFATNSLGTIVS---- 111

  Fly  1602 KRRYQKWDKDEQDPNWGDLKETEKPLPALKKVERKVESFLSPLIDQFAKEGKDKKVVFEARFSKP 1666
                               :|.:.....|:..:.::.|.:|      .:||:...::        
  Rat   112 -------------------REAKLQFAYLENFKSRMRSRVS------VREGQGVVLL-------- 143

  Fly  1667 NCKP---------KWLFRKDEVFTGSKFKFKQENDTYQLIITTPKVEDTGKYTIEIGGVSSTAFL 1722
             |.|         .|:|.:...|.....:.....:|..|.|...:..|.|.||..   |:||...
  Rat   144 -CGPPPHSGELSYAWVFNEYPSFVEEDSRRFVSQETGHLYIAKVEPSDVGNYTCV---VTSTVTN 204

  Fly  1723 NVEEADPTYTFTKPLKKKLEG-FTQHE------------------TTLEC-SVSSSMANVHWFKN 1767
            ......||     ||..:.:| ..::|                  ..||| ::.:.:..::|.::
  Rat   205 ARVLGSPT-----PLVLRSDGVMGEYEPKIELQFPETLPAAKGSTVKLECFALGNPVPQINWRRS 264

  Fly  1768 N-----TKLESDDPRYLISKDINGNLKLIIKDSVLDDAGLYRCQLDKQPDKTECNLKVTEY--PY 1825
            :     ||::        .:..||.|:  |.:...:|.|.|.|..:....|.....::|.|  ||
  Rat   265 DGMPFPTKIK--------LRKFNGVLE--IPNFQQEDTGSYECIAENSRGKNVARGRLTYYAKPY 319

  Fly  1826 KFVKVLKSQQCIEKDTVTLACEIDDAMGE----VQWLRNGEEIKPDKRIQIVKDGRKRKLVIKDC 1886
             :|::||..:...:|::...|.   |.|:    .:||:||:.:..::|||| ::|   .|.|.:.
  Rat   320 -WVQLLKDVETAVEDSLYWECR---ASGKPKPSYRWLKNGDALVLEERIQI-ENG---ALTIANL 376

  Fly  1887 KVTDAGQFKCTTN------ADTTESEIIINYQNRFNKKLKDTEAVEREKLILDIELQDQTAP--- 1942
            .|:|:|.|:|...      ..:.|.:::.:..:.....:|....|:...|:: ::.:...:|   
  Rat   377 NVSDSGMFQCIAENKHGLIYSSAELKVLASAPDFSRNPMKKMIQVQVGSLVI-LDCKPSASPRAL 440

  Fly  1943 CDWKFNGEPIVPSES-IEIKNMGGGKHQLIFSSLDMSNEGEITCESGQLSSKCKLSIRKGESRPN 2006
            ..|| .|:.:|..:: |.:.|.||    |...::..::.|..||                     
  Rat   441 SFWK-KGDTVVREQARISLLNDGG----LKIMNVTKADAGIYTC--------------------- 479

  Fly  2007 IDCPDKFSGPISAPVLLEVPF-KVSGTKQTPVEAKLFKDGKPLPVKDVEVAVTDDKVTFKIKKPS 2070
                           :.|..| |.:||.|                    :.||:         |:
  Rat   480 ---------------IAENQFGKANGTTQ--------------------LVVTE---------PT 500

  Fly  2071 RDLSGPYQIKISNGQGEDTKDVQIICQDVPQPPQDVDITDVYQTSCVVSFNPPSDD----GGTPI 2131
            |.:..|..:.::.|:     .:.:.||....|..|: :...|....:..|......    ||:..
  Rat   501 RIILAPSNMDVAVGE-----SIILPCQVQHDPLLDI-MFAWYFNGTLTDFKKDGSHFEKVGGSSS 559

  Fly  2132 TKYVIERQDLSKKHGWESVAEVLPSEPCLKKIDDLIPKKQYRFRIRAVNAIGQSDPATFKNTILA 2196
            ...:|  :::..||..:.|..|......:....:||.:                           
  Rat   560 GDLMI--RNIQLKHSGKYVCMVQTGVDSVSSAAELIVR--------------------------- 595

  Fly  2197 KDPWDEPGKPKAVDLTDWDKDHADLKWEAPETDGGDPITAYIVEYKEKFSNDWVSGKEV----DG 2257
                ..||.|:.|.:.:.....|.|.| ...||...|:.:|.|:.:..||..|.:.:.|    ||
  Rat   596 ----GSPGPPENVKVDEITDTTAQLSW-TEGTDSHSPVISYAVQARTPFSVGWQNVRTVPEAIDG 655

  Fly  2258 DARTATVDGLKEGQQYEFRVRAVNRAGPGE---PSDKTKSIIAKCRFVKPFIVGEGLKNVTVKKG 2319
            ..|||||..|....:|||||.|.|:.|.||   ||:|.::..|........:.|.|        |
  Rat   656 KTRTATVVELNPWVEYEFRVVASNKIGGGEPSLPSEKVRTEEAAPEVAPSEVSGGG--------G 712

  Fly  2320 QTIRFDIKYDGEPEP-----------------AATWVKGTDNLKFDNQRICLDQLERNSSITIKK 2367
            ......|.:|..||.                 ..||:: |.....||.|...    ||.||....
  Rat   713 SRSELVITWDPVPEELQNGGGFGYVVAFRPLGVTTWIQ-TVVTSPDNPRYVF----RNESIVPFS 772

  Fly  2368 SVRKDTGKYKLVLSNSSGTIESEAQVVVLDRPLPPGGPFEP--------EE------------IR 2412
            ......|.|     |:.|.                 |||.|        ||            :.
  Rat   773 PYEVKVGVY-----NNKGE-----------------GPFSPVTTVFSAEEEPTVAPSHISAHSLS 815

  Fly  2413 ASHIKMKWKR-PDDDGGCEISGYALERMDEETGRWIPAGE--------VGPNETSFDFKGLTPNK 2468
            :|.|::.|.. |.......:.||       |...|...||        |..|:||...:||..|.
  Rat   816 SSEIEVSWNTIPWKSSNGRLLGY-------EVRYWNNGGEEESSSKVKVAGNQTSAVLRGLKSNL 873

  Fly  2469 KYKFRVKAINKEGESEPLETFDAIVARNPYDPPSPPSQPVIDDYDNKSVLLKWKRPPS-DGGRPI 2532
            .|...|:|.|..|......|.:|...:.|  |..||...|.:..|.| |||.|::..: :....:
  Rat   874 AYYTAVRAYNTAGAGPFSATVNATTKKTP--PSQPPGNVVWNATDTK-VLLNWEQVKALENESEV 935

  Fly  2533 THYIVEIKDKFAPSWSEVAKTDDPNPECNVEGLKEKMVYQFRVRAVNKAGPSEPSQ 2588
            |.|.|..:.. :.:..:|..|:..:.|..:. :||.  |...|:|....|....|:
  Rat   936 TGYKVFYRTS-SQNNVQVLNTNKTSAELLLP-IKED--YIIEVKATTDGGDGTSSE 987

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
btNP_001162825.1 I-set 9..101 CDD:254352
Ig 26..100 CDD:143165
I-set 119..210 CDD:254352
Ig 136..209 CDD:143165
I-set 228..320 CDD:254352
IGc2 242..312 CDD:197706
I-set 335..425 CDD:254352
Ig 350..423 CDD:143165
Ig 436..530 CDD:299845
I-set 438..532 CDD:254352
I-set 545..636 CDD:254352
Ig 560..633 CDD:143165
Ig 657..731 CDD:143165
I-set 746..835 CDD:254352
Ig 1496..1586 CDD:299845 14/98 (14%)
IG_like 1503..1588 CDD:214653 15/93 (16%)
I-set 1639..1724 CDD:254352 19/93 (20%)
IG 1750..1821 CDD:214652 15/76 (20%)
IGc2 1750..1806 CDD:197706 13/61 (21%)
I-set 1826..1909 CDD:254352 24/92 (26%)
Ig 1831..1897 CDD:299845 21/69 (30%)
I-set 1914..1998 CDD:254352 16/87 (18%)
Ig 2020..2095 CDD:299845 12/75 (16%)
FN3 2100..2194 CDD:238020 13/97 (13%)
FN3 2203..2292 CDD:238020 36/95 (38%)
I-set 2311..2395 CDD:254352 19/100 (19%)
Ig 2321..2395 CDD:299845 18/90 (20%)
FN3 2399..2493 CDD:238020 30/122 (25%)
FN3 2501..2590 CDD:238020 22/89 (25%)
I-set 2602..2693 CDD:254352
Ig 2619..2693 CDD:299845
FN3 2697..2793 CDD:238020
FN3 2801..2893 CDD:238020
I-set 2902..2995 CDD:254352
Ig 2919..2993 CDD:299845
FN3 2999..3088 CDD:238020
FN3 3102..3191 CDD:238020
I-set 3208..3292 CDD:254352
Ig 3219..3292 CDD:299845
FN3 3296..3390 CDD:238020
FN3 3400..3489 CDD:238020
I-set 3494..3590 CDD:254352
Ig 3516..3590 CDD:299845
FN3 3594..3682 CDD:238020
FN3 3694..3781 CDD:238020
I-set 3795..3885 CDD:254352
Ig 3813..3885 CDD:299845
FN3 3889..3980 CDD:238020
FN3 3990..4082 CDD:238020
I-set 4090..4181 CDD:254352
Ig 4108..4181 CDD:299845
FN3 4185..4271 CDD:238020
FN3 4285..4383 CDD:238020
Ig 4404..4480 CDD:299845
FN3 4484..4571 CDD:238020
FN3 4584..4677 CDD:238020
I-set 4685..4775 CDD:254352
Ig 4703..4775 CDD:299845
FN3 4779..4863 CDD:238020
FN3 4879..4970 CDD:238020
IG 4989..5069 CDD:214652
Ig 4996..5069 CDD:299845
FN3 5073..5166 CDD:238020
FN3 5175..5265 CDD:238020
I-set 5276..5366 CDD:254352
Ig 5293..5366 CDD:299845
FN3 5370..5462 CDD:238020
FN3 5470..5561 CDD:238020
Ig 5559..5654 CDD:299845
I-set 5570..5660 CDD:254352
FN3 5664..5755 CDD:238020
FN3 5764..5853 CDD:238020
I-set 5865..5954 CDD:254352
Ig 5882..5954 CDD:299845
FN3 5958..6049 CDD:238020
FN3 6062..6153 CDD:238020
I-set 6173..6255 CDD:254352
Ig_Titin_like 6182..6255 CDD:143225
FN3 6259..6350 CDD:238020
FN3 6359..6451 CDD:238020
FN3 6470..6552 CDD:238020
I-set 6564..6650 CDD:254352
Ig_Titin_like 6577..6650 CDD:143225
FN3 6654..6745 CDD:238020
FN3 6754..6840 CDD:238020
I-set 6855..6946 CDD:254352
Ig 6874..6946 CDD:299845
FN3 6950..7042 CDD:238020
FN3 7050..7139 CDD:238020
FN3 7151..7237 CDD:238020
I-set 7254..7334 CDD:254352
Ig 7272..7339 CDD:143165
IG_like 7354..7440 CDD:214653
Ig 7366..7440 CDD:299845
FN3 7444..7531 CDD:238020
FN3 7545..7637 CDD:238020
I-set 7648..7737 CDD:254352
Ig 7665..7734 CDD:143165
Ig 7760..7833 CDD:299845
FN3 7837..7927 CDD:238020
STKc_Twitchin_like 7986..8244 CDD:271016
S_TKc 7989..8244 CDD:214567
Ig 8311..8394 CDD:299845
I-set 8312..8401 CDD:254352
I-set 8437..8525 CDD:254352
Ig 8455..8519 CDD:143165
I-set 8632..8721 CDD:254352
IGc2 8646..8711 CDD:197706
I-set 8740..8831 CDD:254352
Ig 8757..8826 CDD:143165
I-set 8839..8922 CDD:254352
Ig 8845..>8909 CDD:299845
Cntn3NP_062202.1 Ig 25..114 CDD:299845 21/150 (14%)
I-set 26..117 CDD:254352 22/153 (14%)
Ig 120..214 CDD:299845 22/116 (19%)
IG_like 130..205 CDD:214653 19/92 (21%)
Ig 227..315 CDD:299845 16/97 (16%)
IG_like 234..313 CDD:214653 15/88 (17%)
I-set 318..403 CDD:254352 26/92 (28%)
Ig 320..403 CDD:299845 24/89 (27%)
I-set 408..496 CDD:254352 22/149 (15%)
Ig 424..496 CDD:299845 20/133 (15%)
IG_like 506..594 CDD:214653 16/95 (17%)
Ig 515..598 CDD:299845 15/121 (12%)
FN3 598..695 CDD:238020 37/97 (38%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 684..714 9/37 (24%)
FN3 703..795 CDD:238020 25/126 (20%)
FN3 805..898 CDD:238020 24/99 (24%)
FN3 906..991 CDD:238020 22/87 (25%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.910

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