DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment bt and Dscam2

DIOPT Version :9

Sequence 1:NP_001162825.1 Gene:bt / 43814 FlyBaseID:FBgn0005666 Length:8933 Species:Drosophila melanogaster
Sequence 2:NP_001261500.1 Gene:Dscam2 / 38788 FlyBaseID:FBgn0265296 Length:2101 Species:Drosophila melanogaster


Alignment Length:1568 Identity:342/1568 - (21%)
Similarity:565/1568 - (36%) Gaps:397/1568 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly  1497 PSIVDVQESYSVVEDSTAYLTVGVEGSPAPTFKFY----KGVSEILEGGRFKFLTDGQTNTITLC 1557
            ||:|:......|.:|..|.|....:|.|:|.:.::    .|...:|.|.|.:.|..      .|.
  Fly   238 PSVVEHTAHVQVSQDEGAVLLCVAQGCPSPEYSWFTHNGAGPLPVLSGPRVRLLGP------ILA 296

  Fly  1558 MRKCKPNDESKYKIVVSNIHGEDSAEMQLYVSD---------------SSGMDFRAMLKKR---- 1603
            :......|...||....|:.||.|||::|.|:.               ....:||.::...    
  Fly   297 IEAVTGEDSGVYKCTAGNVGGEASAELRLTVATPIQVEISPNVLSVHMGGTAEFRCLVTSNGSPV 361

  Fly  1604 --RYQKWDKD-EQDPNWGDLKETEKPLPALKK--------VERKVES-----------------F 1640
              :...|.|| .|.|:.|.:::| ..:|.:.:        |.|:.|.                 .
  Fly   362 GMQNILWYKDGRQLPSSGRVEDT-LVVPRVSRENRGMYQCVVRRPEGDTFQATAELQLGDAPPVL 425

  Fly  1641 LSPLIDQFAKEGKDKKVVFEARFSKPNCKPKWLFRKDEVFTGSKFKFKQ----ENDTYQLI-ITT 1700
            |...|:|..:.|....:...|. ..|..:..|......:.:..:|...|    ..|....: |:.
  Fly   426 LYSFIEQTLQPGPAVSLKCSAA-GNPTPQISWTLDGFPLPSNGRFMIGQYITVHGDVISHVNISH 489

  Fly  1701 PKVEDTGKYTI----EIGGVSSTAFLNVEEADPTYTFTKP---LKKKLEGFTQHETTLECSVSS- 1757
            ..|||.|:|..    ..|.|...|.||:        :..|   |..|:...:.....|:|.|:. 
  Fly   490 VMVEDGGEYACIAENRAGRVQHAARLNI--------YGLPYIRLIPKVTAVSGETLNLKCPVAGY 546

  Fly  1758 SMANVHWFKNNTKLESDDPRYLISKDINGNLKLIIKDSVLDDAGLYRC-QLDKQPDKTECNLKVT 1821
            .:..:||.:...:| .||.|..:..|.:..:..:.|:|   |:|:|.| ..:||......:.:||
  Fly   547 PIEEIHWERGGREL-PDDIRQRVQPDGSLTISPVQKNS---DSGVYTCWARNKQGHSARRSGEVT 607

  Fly  1822 EY------PYKFVKVLKSQQCIEKDTVTLACEI--DDAMGEVQWLRNGEEIKPDKRIQIVK-DGR 1877
            ..      |:: ..:|   |....|..:|.|.:  .|....:.|.::|..|.|.:.:.:.: |..
  Fly   608 VIVPPKLSPFQ-TNIL---QLNMGDRASLTCSVVKGDLPLTINWRKDGRPIDPTQHMSVKQVDQY 668

  Fly  1878 KRKLVIKDCKVTDAGQFKCTTNADTTESE----IIINYQNRFNKKLKDTEAVEREKLILDIELQD 1938
            ...|||::......|.:.|.......|.|    :::|...|:..:..|.. |||.:.|: :..|.
  Fly   669 NSILVIENLGSDHTGNYSCVVRNSAAEVENSQALLVNVPPRWIVEPVDAN-VERNRHIM-LHCQA 731

  Fly  1939 QTAPCD---WK-----FNGEPIVPSESIEIKNMGGGKHQLIFSSLDMSNEGEITCESG------- 1988
            |..|..   ||     .:||.....|....|.:|.|  .|:...:....||...|::.       
  Fly   732 QGVPTPSIVWKKATGSKSGEYEEVRERPFTKLLGNG--SLLLQHVKEDREGFYLCQANNGIGTGI 794

  Fly  1989 ----QL---------SSKCKLSIRKGESRPNIDCPDKFSGPISAPVLLEVPFKVSGTKQTPVEAK 2040
                ||         |:...:.::||::                 .||:.  .|||.|  |:...
  Fly   795 GKVIQLKVNSSPYFSSTSRSVMVKKGDT-----------------ALLQC--AVSGDK--PINIV 838

  Fly  2041 LFKDGKPL--PVKDVEVAV----TDDKVTFKIKKPSRDL--SGPYQIKISNGQGEDTKDVQIICQ 2097
            ..:.||..  |..:.:::|    |.|.|:.:::..:.|.  ||||..:.||..|.|.:.||:..|
  Fly   839 WMRSGKNTLNPSTNYKISVKQEATPDGVSAELQIRTVDATDSGPYFCRASNLYGNDQQLVQLQVQ 903

  Fly  2098 DVPQPPQDVDITDVYQTSCVVSFNPPSDDGGTPITKYVIERQDLSKKHG---------WESVAEV 2153
            :.|.||..::...:...|..:.:.|.:...| .:|||::|.::..  |.         |:.: ||
  Fly   904 EPPLPPSVLEAAMISSRSVNIKWQPKTLGTG-DVTKYIVEFREAD--HSLPPALFVDQWQQI-EV 964

  Fly  2154 LPSEPCLKKIDDLIPKKQYRFRIRAVNAIGQSDPATFKNTILAKDPWDEPGKPKAVDLTDWDKDH 2218
            .........|::|.|..:|.||:.|..:.|:|.|:  :..|:..:|....|.|.::.........
  Fly   965 KDPPHFNAMIENLKPATRYAFRVIAEGSAGRSAPS--QELIVRTEPQRPAGPPLSLSARPLSSTE 1027

  Fly  2219 ADLKWEA--PETDGGDPITAYIVEYKEKFSNDW------VSGKEVDGDARTA--TVDGLKEGQQY 2273
            ..:.|.|  ||...|| |..|.|.||...|.:.      |||   |||....  .:.||.:..:|
  Fly  1028 LLISWVAPLPELRHGD-IQGYNVGYKLSSSGNTAYNFTSVSG---DGDGGNGELLLSGLAKFARY 1088

  Fly  2274 EFRVRAVNRAGPGEPSDKTKSIIAKCRFVKPFIVGEGLKNVTVKKGQTIRF------DIKYDGEP 2332
            ...|:|.|:.|||..|:.|              ..:.:::|..:..:.:|.      .::...:|
  Fly  1089 TVVVQAFNQVGPGPLSEPT--------------AAQTMEDVPSRPPEDVRCAALSSQSLQVSWQP 1139

  Fly  2333 EPAATWVKGTDNLKFDNQRICLDQLERNSSITIKKSVRKDTGKYKLVLSNSSGTIESEAQVVVLD 2397
            .|    :..|:.|                           ...|||:                  
  Fly  1140 PP----IYHTNGL---------------------------LQGYKLI------------------ 1155

  Fly  2398 RPLPPGGPFEP--EEIRASHIKMKWKRPDDDGGCEISGYALERMDEETGRWIPAGEVGPNETSFD 2460
                    |||  ::|:.|                        .||...|...|       .:..
  Fly  1156 --------FEPIIDDIQPS------------------------KDEVESRKTTA-------LTMV 1181

  Fly  2461 FKGLTPNKKYKFRVKAINKEGE---SEPLETFDAIVARNPYDPPSPPSQPVIDDYDNKSVLLKWK 2522
            ..||.....|..:|.|..:.|:   |:||      ...:..|.|..|:...:....::|:.:.| 
  Fly  1182 LTGLRKYTNYSIQVLAHTRMGDGVVSKPL------FCHSEEDVPEAPADIKVVSSSSQSLYISW- 1239

  Fly  2523 RPPSDGGRPITHY-----IVEIKDKFAPSWSEVAKTDDPNPECNVE--GLKEKMVYQFRVRAVNK 2580
            .||::....||.|     :|..:::.     ...|...|:.:...|  ||...|.|||.|.|..:
  Fly  1240 LPPNEPNGVITKYSLYTRVVNGREEL-----NNEKRSLPSQQAYYEAKGLHPHMEYQFWVTASTR 1299

  Fly  2581 AGPSEPSQPTDNHLCKHKNLKPQIDRSTFKRVTIKSGR--THKWSVDV------LGEPIPELHWS 2637
            .|..:.|:           :..||..:......|..|.  ...|...|      :|:|..|  | 
  Fly  1300 VGEGKSSR-----------VSSQITTNRIPARIISFGGPVVRPWRSTVTLPCTAVGKPKRE--W- 1350

  Fly  2638 WRDDIPLTNGDRIKIENVDYHTDFSITNVLRKDSGFYTLKAENRNGIDRETVELVVLGKPSSPKG 2702
            ::.|:.|..|.....:.:| ..|..|:::...|.|.|:.:.:|..|.||.|..|:|...|::|  
  Fly  1351 FKSDVALRQGGLHNSQLLD-SGDLIISSLQLADGGNYSCQVDNGIGTDRLTHTLIVQVPPTAP-- 1412

  Fly  2703 PLAVSDVTASGCKLQWKKPEDDGGVPIKEYVVEKMDTATGKWVRVGRSPG-------EKEPPSFD 2760
            .|.|:..|:|...:.| |....|..||           ||..:...|:.|       .:...|.:
  Fly  1413 VLYVTSATSSSILMHW-KCGFTGNAPI-----------TGYTLFYRRANGNTDEMQLSRHASSHE 1465

  Fly  2761 VTGLSLGSEYMFRVSAVNEEGESEPLTTLVGVVAKDPFDEPNKPGTPEVTDYDNQSISLKWAAPN 2825
            :.||..||.|...:||.|:.|.| |.:|::.|..     :...||.|         .|....|||
  Fly  1466 LKGLMCGSTYQIHLSAQNKVGTS-PTSTILHVRT-----QGQSPGHP---------ASTALLAPN 1515

  Fly  2826 N-----------DGGAPIQKYIIEKK---NKNKTEWEKALEIPGDQLEATVAGLQEYGEYQFRVI 2876
            :           |.|.|:..::::.:   :....||.........|....:..||....||.|:.
  Fly  1516 STSLLVRLHSWPDNGCPLLYFVLQYRAVTDDPDAEWVLVSNALKPQRRIVINNLQPSTLYQLRME 1580

  Fly  2877 AVNKAGLS 2884
            |.|.||:|
  Fly  1581 AHNVAGIS 1588

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
btNP_001162825.1 I-set 9..101 CDD:254352
Ig 26..100 CDD:143165
I-set 119..210 CDD:254352
Ig 136..209 CDD:143165
I-set 228..320 CDD:254352
IGc2 242..312 CDD:197706
I-set 335..425 CDD:254352
Ig 350..423 CDD:143165
Ig 436..530 CDD:299845
I-set 438..532 CDD:254352
I-set 545..636 CDD:254352
Ig 560..633 CDD:143165
Ig 657..731 CDD:143165
I-set 746..835 CDD:254352
Ig 1496..1586 CDD:299845 25/92 (27%)
IG_like 1503..1588 CDD:214653 23/88 (26%)
I-set 1639..1724 CDD:254352 20/110 (18%)
IG 1750..1821 CDD:214652 18/72 (25%)
IGc2 1750..1806 CDD:197706 16/57 (28%)
I-set 1826..1909 CDD:254352 18/89 (20%)
Ig 1831..1897 CDD:299845 15/68 (22%)
I-set 1914..1998 CDD:254352 24/111 (22%)
Ig 2020..2095 CDD:299845 25/82 (30%)
FN3 2100..2194 CDD:238020 24/102 (24%)
FN3 2203..2292 CDD:238020 30/98 (31%)
I-set 2311..2395 CDD:254352 9/89 (10%)
Ig 2321..2395 CDD:299845 8/79 (10%)
FN3 2399..2493 CDD:238020 18/98 (18%)
FN3 2501..2590 CDD:238020 23/95 (24%)
I-set 2602..2693 CDD:254352 25/98 (26%)
Ig 2619..2693 CDD:299845 21/79 (27%)
FN3 2697..2793 CDD:238020 28/102 (27%)
FN3 2801..2893 CDD:238020 23/98 (23%)
I-set 2902..2995 CDD:254352
Ig 2919..2993 CDD:299845
FN3 2999..3088 CDD:238020
FN3 3102..3191 CDD:238020
I-set 3208..3292 CDD:254352
Ig 3219..3292 CDD:299845
FN3 3296..3390 CDD:238020
FN3 3400..3489 CDD:238020
I-set 3494..3590 CDD:254352
Ig 3516..3590 CDD:299845
FN3 3594..3682 CDD:238020
FN3 3694..3781 CDD:238020
I-set 3795..3885 CDD:254352
Ig 3813..3885 CDD:299845
FN3 3889..3980 CDD:238020
FN3 3990..4082 CDD:238020
I-set 4090..4181 CDD:254352
Ig 4108..4181 CDD:299845
FN3 4185..4271 CDD:238020
FN3 4285..4383 CDD:238020
Ig 4404..4480 CDD:299845
FN3 4484..4571 CDD:238020
FN3 4584..4677 CDD:238020
I-set 4685..4775 CDD:254352
Ig 4703..4775 CDD:299845
FN3 4779..4863 CDD:238020
FN3 4879..4970 CDD:238020
IG 4989..5069 CDD:214652
Ig 4996..5069 CDD:299845
FN3 5073..5166 CDD:238020
FN3 5175..5265 CDD:238020
I-set 5276..5366 CDD:254352
Ig 5293..5366 CDD:299845
FN3 5370..5462 CDD:238020
FN3 5470..5561 CDD:238020
Ig 5559..5654 CDD:299845
I-set 5570..5660 CDD:254352
FN3 5664..5755 CDD:238020
FN3 5764..5853 CDD:238020
I-set 5865..5954 CDD:254352
Ig 5882..5954 CDD:299845
FN3 5958..6049 CDD:238020
FN3 6062..6153 CDD:238020
I-set 6173..6255 CDD:254352
Ig_Titin_like 6182..6255 CDD:143225
FN3 6259..6350 CDD:238020
FN3 6359..6451 CDD:238020
FN3 6470..6552 CDD:238020
I-set 6564..6650 CDD:254352
Ig_Titin_like 6577..6650 CDD:143225
FN3 6654..6745 CDD:238020
FN3 6754..6840 CDD:238020
I-set 6855..6946 CDD:254352
Ig 6874..6946 CDD:299845
FN3 6950..7042 CDD:238020
FN3 7050..7139 CDD:238020
FN3 7151..7237 CDD:238020
I-set 7254..7334 CDD:254352
Ig 7272..7339 CDD:143165
IG_like 7354..7440 CDD:214653
Ig 7366..7440 CDD:299845
FN3 7444..7531 CDD:238020
FN3 7545..7637 CDD:238020
I-set 7648..7737 CDD:254352
Ig 7665..7734 CDD:143165
Ig 7760..7833 CDD:299845
FN3 7837..7927 CDD:238020
STKc_Twitchin_like 7986..8244 CDD:271016
S_TKc 7989..8244 CDD:214567
Ig 8311..8394 CDD:299845
I-set 8312..8401 CDD:254352
I-set 8437..8525 CDD:254352
Ig 8455..8519 CDD:143165
I-set 8632..8721 CDD:254352
IGc2 8646..8711 CDD:197706
I-set 8740..8831 CDD:254352
Ig 8757..8826 CDD:143165
I-set 8839..8922 CDD:254352
Ig 8845..>8909 CDD:299845
Dscam2NP_001261500.1 Ig 51..127 CDD:299845
Ig 138..>203 CDD:299845
I-set 238..327 CDD:254352 26/94 (28%)
Ig 247..327 CDD:299845 23/85 (27%)
I-set 332..418 CDD:254352 13/86 (15%)
IGc2 344..407 CDD:197706 12/63 (19%)
IG_like 432..517 CDD:214653 18/85 (21%)
IGc2 436..507 CDD:197706 13/71 (18%)
I-set 521..610 CDD:254352 23/92 (25%)
IGc2 533..597 CDD:197706 17/67 (25%)
Ig 630..699 CDD:143165 15/68 (22%)
IG_like 714..802 CDD:214653 22/91 (24%)
Ig 725..802 CDD:299845 18/79 (23%)
Ig 823..894 CDD:143165 22/74 (30%)
FN3 906..1006 CDD:238020 25/105 (24%)
FN3 1013..1111 CDD:238020 31/115 (27%)
FN3 1119..1209 CDD:238020 24/177 (14%)
FN3 1219..1313 CDD:238020 24/110 (22%)
Ig 1336..1402 CDD:143165 19/69 (28%)
FN3 1409..1498 CDD:238020 29/103 (28%)
FN3 1515..1588 CDD:238020 16/72 (22%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.910

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