DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment bt and Lar

DIOPT Version :9

Sequence 1:NP_001162825.1 Gene:bt / 43814 FlyBaseID:FBgn0005666 Length:8933 Species:Drosophila melanogaster
Sequence 2:NP_001260594.1 Gene:Lar / 35259 FlyBaseID:FBgn0000464 Length:2032 Species:Drosophila melanogaster


Alignment Length:2308 Identity:468/2308 - (20%)
Similarity:775/2308 - (33%) Gaps:681/2308 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly  5275 PPKIDRNFMSDIKIKAGNVFEFDVPVTGEPLPSKDWTHEGNMIINTDRVKISNFDDRTKIRILDA 5339
            ||:|.|...:. .::.|.|..|.....|:|.||..|...|                         
  Fly    35 PPEIIRKPQNQ-GVRVGGVASFYCAARGDPPPSIVWRKNG------------------------- 73

  Fly  5340 KRSDTGVYTLTARNINGTDRHNVKVTILDAPSVPEGPLRNGDVSKNSIVLRWRP---PKDDGGSE 5401
                        :.::||..   :.|:|:.|         |.:|    :||..|   .:||...|
  Fly    74 ------------KKVSGTQS---RYTVLEQP---------GGIS----ILRIEPVRAGRDDAPYE 110

  Fly  5402 ITHYVVEKMDNEAMRWVPVGDCTDTEIRADNLIENHDYSFRVRAVNKQGQSQPLTTSQPITAKDP 5466
            .   |.|.         .|||....           |.:..:...:|.....|:.|..|.|....
  Fly   111 C---VAEN---------GVGDAVSA-----------DATLTIYEGDKTPAGFPVITQGPGTRVIE 152

  Fly  5467 YSHP-----DKPGQPQAT-DWGKHFVDLEWSTPK---RDGGAPISSYIIEKRPKFGQWERAAVVL 5522
            ..|.     ...|.|... .|.|:...::.|.|:   :||...|.:...|.:.|:          
  Fly   153 VGHTVLMTCKAIGNPTPNIYWIKNQTKVDMSNPRYSLKDGFLQIENSREEDQGKY---------- 207

  Fly  5523 GDNCKAHVPELTNGGEYEFRVIAVNRGGPSDPSDPSSTIICKPRFLAPFFDKSLLNDITVHAGKR 5587
              .|   |.|.:.|.|:                ..::.:..|.|.:.|.|.:.......|..|..
  Fly   208 --EC---VAENSMGTEH----------------SKATNLYVKVRRVPPTFSRPPETISEVMLGSN 251

  Fly  5588 LGWTLPIEASPRPLITWLYNGKEIGSNSRGESGLFQNELTFEIVSSLRSDEGRYTLILKNEHGSF 5652
            |..:.....||.|.:.|:...:::  ....|..:.:|.|  ::::.  .:...||.|..:..|..
  Fly   252 LNLSCIAVGSPMPHVKWMKGSEDL--TPENEMPIGRNVL--QLINI--QESANYTCIAASTLGQI 310

  Fly  5653 DASAHATVLDRPSPPKGPLD--ITKITRDGCHLTWNV--PDDDGGSPILHYIIE-KMDLSRSTWS 5712
            |:   .:|:...|.|..|.|  |:::|.....|.|:.  |:|     :.:|:|: |...:...:|
  Fly   311 DS---VSVVKVQSLPTAPTDVQISEVTATSVRLEWSYKGPED-----LQYYVIQYKPKNANQAFS 367

  Fly  5713 DAGMSTHIVHDVTRLVHRKEYLFRVKAVNAIGESDPLEAVNTIIAKNEF---DEPDAPGKPIITD 5774
            :......:.:.|..|....||.|.|.|||.||...|............|   ....||....:..
  Fly   368 EISGIITMYYVVRALSPYTEYEFYVIAVNNIGRGPPSAPATCTTGDFSFGGTKMESAPRNVQVRT 432

  Fly  5775 WDRDHIDLQWAVPKSDGGAPISEYIIQKKEKGSPYWTNVRHVP---------SNKNTTTIPELTE 5830
            .....:.:.|..|::..| .::.|.:        |:|...:.|         .|...||:.|||.
  Fly   433 LSSSTMVITWEPPETPNG-QVTGYKV--------YYTTNSNQPEASWNSQMVDNSELTTVSELTP 488

  Fly  5831 GQEYEFRVIAVNQAG-------------QSEPSEPSDMIMAKPRYLPPKIITPLNEVRIKCGLIF 5882
            ...|..||.|....|             |..||:||:...                         
  Fly   489 HAIYTVRVQAYTSMGAGPMSTPVQVKAQQGVPSQPSNFRA------------------------- 528

  Fly  5883 HTDIHFIGEPAPEATWTLNSNPLLSND---------RSTITSIGHH-----SVVHTVNCQRSDSG 5933
             ||   |||.|....||   .|..|::         ..|..:..||     |..:|::....|: 
  Fly   529 -TD---IGETAVTLQWT---KPTHSSENIVHYELYWNDTYANQAHHKRISNSEAYTLDGLYPDT- 585

  Fly  5934 IYHLLLRNSSGIDEGSFELVVLDRPGPPEGPMEY----EEITA-----NSVTISWKPP---KDNG 5986
            :|::.|...|...||:      ..|..|....:|    ..|||     .::::||.||   :.||
  Fly   586 LYYIWLAARSQRGEGA------TTPPIPVRTKQYGAPPRNITAIATSSTTISLSWLPPPVERSNG 644

  Fly  5987 GSEISSYVI-------EKRDLTHGGGWVPAVNYVSAKYNHAVVPRLLEGTMYELRVMAENLQG-- 6042
              .|..|.:       |..:.|     ...:|..|     .|:..|...|.|::.|:|....|  
  Fly   645 --RIIYYKVFFVEVGREDDEAT-----TMTLNMTS-----IVLDELKRWTEYKIWVLAGTSVGDG 697

  Fly  6043 -RSDPLTSDQPVVAKSQYTVPGAPGKPELTDSDKNHITIKWKQPISNGGSPII-GYDI---ERRD 6102
             ||      .|::.::|..|||.|...:.|..:...|.:.||.|:....:.|| ||.|   |.||
  Fly   698 PRS------HPIILRTQEDVPGDPQDVKATPLNSTSIHVSWKPPLEKDRNGIIRGYHIHAQELRD 756

  Fly  6103 VNTGRWIKINGQP-----VPTAEYQDDRVTSNHQYQYRISAVNAAGNGKTSEPSAIFNARPLREK 6162
            ...|    ...:|     |.|.|:....:..:.:|..:::|:...|:|..|....:.....:..:
  Fly   757 EGKG----FLNEPFKFDVVDTLEFNVTGLQPDTKYSIQVAALTRKGDGDRSAAIVVKTPGGVPVR 817

  Fly  6163 PRFYFDGLIGKRIKVRAGEPVNLNIPISGAPTPTIEWKR-----GDLKLEEGKRISYE------- 6215
            |..        .:|:...||:   :.|.      :||:|     |:|:   |.|:.:.       
  Fly   818 PTV--------SLKIMEREPI---VSIE------LEWERPAQTYGELR---GYRLRWGVKDQALK 862

  Fly  6216 ----TNSERTLFRIDDSNRRDSGKYTVTAANE--FGKDTADIEVIVVDKPSPPEGPLSYTETAPD 6274
                :..:.|..|.|:..|....::.|..:|.  .|::|..|.......|..|...::.....||
  Fly   863 EEMLSGPQMTKKRFDNLERGVEYEFRVAGSNHIGIGQETVKIFQTPEGTPGGPPSNITIRFQTPD 927

  Fly  6275 HISLHWYSP-KDDGGSDITGYIIEFTEFGVDDWKPVPGTCPNTNFTVK-----NLVEGKKYVFRI 6333
            .:.:.|..| ::.....||.|.::|.:      |...|.....|.|::     ||.|..:|:||:
  Fly   928 VLCVTWDPPTREHRNGIITRYDVQFHK------KIDHGLGSERNMTLRKAVFTNLEENTEYIFRV 986

  Fly  6334 RAENIYGASEALEGKPVLAKSPFDPPGAPSQPTISAYTPNSANLEWHPPDDCGGKPITGYIVERR 6398
            ||....||....:  .::.::..|...||......|.:..:|.:.|.|....|  .:.||.:...
  Fly   987 RAYTKQGAGPFSD--KLIVETERDMGRAPMSLQAEATSEQTAEIWWEPVTSRG--KLLGYKIFYT 1047

  Fly  6399 ERGGEWIKCNNYPTPNTSYTVS----NLRDGARYEFRVLAVNEAGPGHPSKPSDPMTAEHQRYRP 6459
            ....|  ..:::.|.....|.|    ||...|:|...:.|..:.|.|   :.|:.:|.   |.:|
  Fly  1048 MTAVE--DLDDWQTKTVGLTESADLVNLEKFAQYAVAIAARFKNGLG---RLSEKVTV---RIKP 1104

  Fly  6460 -DPPEPPKPDRITRNGVTLSWRPP-------------------RTDGKSR---------IKGYYV 6495
             |.|...:...::.:.:||||.||                   .:.|.|:         |..:||
  Fly  1105 EDVPLNLRAHDVSTHSMTLSWSPPIRLTPVNYKISFDAMKVFVDSQGFSQTQIVPKREIILKHYV 1169

  Fly  6496 EMRPKNGKDWKTVNDI----PINSTVYTVPSLKEGEEYSFRVVAENEVGRSDPSKPSQPITIEEQ 6556
            :..        |:|::    ..|..|..:||     :||:|              |...||:..|
  Fly  1170 KTH--------TINELSPFTTYNVNVSAIPS-----DYSYR--------------PPTKITVTTQ 1207

  Fly  6557 PNKP----------CMELGKVRDIVCRAGDDFSIHVPYLAFPKPNAFWYSNDNMLDDNNRVHK-- 6609
            ...|          .:...::..|:.:|.:::.....|.....|           :|.:.:||  
  Fly  1208 MAAPQPMVKPDFYGVVNGEEILVILPQASEEYGPISHYYLVVVP-----------EDKSNLHKIP 1261

  Fly  6610 --HLTDD------------AASVVVKNSKRADSGQYRLQLKNTSGFDTATINVRVLDR------- 6653
              .||||            |..:..|..:|:....:.|    .||.|......|.|:|       
  Fly  1262 DQFLTDDLLPGRNKPERPNAPYIAAKFPQRSIPFTFHL----GSGDDYHNFTNRKLEREKRYRIF 1322

  Fly  6654 -----PSPPTRLRA----DEFSGDSLTLYWNPPNDDGGSAIQNYIIE-------KKEARSSTW-- 6700
                 .:|...|..    .||.  ||.:...||.:.......|:..|       .|:.....|  
  Fly  1323 VRAVVDTPQKHLYTSSPFSEFL--SLDMREAPPGERPHRPDPNWPAEPEVSVNRNKDEPEILWVV 1385

  Fly  6701 --SKVSSFCTVPFVRIRNLVLNKEYDFRVIAENKYGQSDPANTSEPILA---------RHPFDIP 6754
              ..||:|.....:.:..:|..:....:.        .|.|..:.|::|         ..|.|:.
  Fly  1386 LPLMVSTFIVSTALIVLCVVKRRRQPCKT--------PDQAAVTRPLMAADLGAGPTPSDPVDMR 1442

  Fly  6755 ----NTPG-IPHGIDSTEDSITIAWTKPKHDGGSPITGYIIEKRLLSDD--KWTKAVHALCPDLS 6812
                .||| |.|      ..|.|          |....:|  :||.|:|  |:::...::.|...
  Fly  1443 RLNFQTPGMISH------PPIPI----------SEFANHI--ERLKSNDNQKFSQEYESIEPGQQ 1489

  Fly  6813 CKIPNL-IENAEYEFRVAAVNAAGQS-----AYSG--SSDLI---FCRRPPHAPKITSDLSIRDM 6866
            ....|. :|:.:.:.|.|.|.|...|     |..|  .||.|   :|                  
  Fly  1490 FTWDNSNLEHNKSKNRYANVTAYDHSRVQLPAVEGVVGSDYINANYC------------------ 1536

  Fly  6867 TVIAGDEFRITVPYHASPRPTAS---------WSLNGLEVIPGERIKFDSNDYASMYYNKSAKRD 6922
                 |.:|....|.|:..|...         |.|....::...|::..:......|:  ..:..
  Fly  1537 -----DGYRKHNAYVATQGPLQETFVDFWRMCWELKTATIVMMTRLEERTRIKCDQYW--PTRGT 1594

  Fly  6923 ET-GSYTITLTNNKGSDTAS------CHVTVVDRPLPPQGPLNAYDITPD--------------- 6965
            || |...:|:|..:...|.|      |.....||....|....|:   ||               
  Fly  1595 ETYGQIFVTITETQELATYSIRTFQLCRQGFNDRREIKQLQFTAW---PDHGVPDHPAPFLQFLR 1656

  Fly  6966 TCTLAWKTPLDDGGSPITNYVVEKLDNSGSWVKISSFV-RNTHYDVMGLEPHY-----KYNFRVR 7024
            .|...  ||.:.|  |:..:....:..:|.::.|.|.: |..|..::.:..|.     :.|:.|:
  Fly  1657 RCRAL--TPPESG--PVIVHCSAGVGRTGCYIVIDSMLERMKHEKIIDIYGHVTCLRAQRNYMVQ 1717

  Fly  7025 AENQY-GLSDPLDIIEPIVAKHQFTVPDEPGQPKVIDWDSGNV-----TLIWTRPLSDGGSRIQG 7083
            .|:|| .:.|.  |:|.|:.    .|.:.|.:         |:     .|:.|.|    |..|.|
  Fly  1718 TEDQYIFIHDA--ILEAIIC----GVTEVPAR---------NLHTHLQKLLITEP----GETISG 1763

  Fly  7084 YQIEYRDILN---DSS------------WNAYDYIIKDTKYQLY----NLINGSEYEFRIKAKNA 7129
            .::|::.:.|   |||            .|...:|:.....::|    :.|.||:|   :.|...
  Fly  1764 MEVEFKKLSNVKMDSSKFVTANLPCNKHKNRLVHILPYESSRVYLTPIHGIEGSDY---VNASFI 1825

  Fly  7130 AGLSKPSSPSLRFKLKGKFTVPSPPGAPQVTRVGKNYVDLKWEKPLRDGGSRITGYIIERRDIGG 7194
            .|          ::.:..:.....|    |....:::..:.||.     .|.|...:.:.:::|.
  Fly  1826 DG----------YRYRSAYIAAQGP----VQDAAEDFWRMLWEH-----NSTIVVMLTKLKEMGR 1871

  Fly  7195 AVWVKCNDY----NVLDTEYTVMNLI---EMGDYEFRVFAVNSA--GRSEP----SLCTMPIKVC 7246
            .   ||..|    ..:..:|.|::.|   .|..|:.|.|.|..|  |.|..    .....|.:..
  Fly  1872 E---KCFQYWPHERSVRYQYYVVDPIAEYNMPQYKLREFKVTDARDGSSRTVRQFQFIDWPEQGV 1933

  Fly  7247 EVLGGKKPDWITRLQDKVAPFGKD--YTLQCAA 7277
            ...|....|:|.::......||:|  .|:.|:|
  Fly  1934 PKSGEGFIDFIGQVHKTKEQFGQDGPITVHCSA 1966

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
btNP_001162825.1 I-set 9..101 CDD:254352
Ig 26..100 CDD:143165
I-set 119..210 CDD:254352
Ig 136..209 CDD:143165
I-set 228..320 CDD:254352
IGc2 242..312 CDD:197706
I-set 335..425 CDD:254352
Ig 350..423 CDD:143165
Ig 436..530 CDD:299845
I-set 438..532 CDD:254352
I-set 545..636 CDD:254352
Ig 560..633 CDD:143165
Ig 657..731 CDD:143165
I-set 746..835 CDD:254352
Ig 1496..1586 CDD:299845
IG_like 1503..1588 CDD:214653
I-set 1639..1724 CDD:254352
IG 1750..1821 CDD:214652
IGc2 1750..1806 CDD:197706
I-set 1826..1909 CDD:254352
Ig 1831..1897 CDD:299845
I-set 1914..1998 CDD:254352
Ig 2020..2095 CDD:299845
FN3 2100..2194 CDD:238020
FN3 2203..2292 CDD:238020
I-set 2311..2395 CDD:254352
Ig 2321..2395 CDD:299845
FN3 2399..2493 CDD:238020
FN3 2501..2590 CDD:238020
I-set 2602..2693 CDD:254352
Ig 2619..2693 CDD:299845
FN3 2697..2793 CDD:238020
FN3 2801..2893 CDD:238020
I-set 2902..2995 CDD:254352
Ig 2919..2993 CDD:299845
FN3 2999..3088 CDD:238020
FN3 3102..3191 CDD:238020
I-set 3208..3292 CDD:254352
Ig 3219..3292 CDD:299845
FN3 3296..3390 CDD:238020
FN3 3400..3489 CDD:238020
I-set 3494..3590 CDD:254352
Ig 3516..3590 CDD:299845
FN3 3594..3682 CDD:238020
FN3 3694..3781 CDD:238020
I-set 3795..3885 CDD:254352
Ig 3813..3885 CDD:299845
FN3 3889..3980 CDD:238020
FN3 3990..4082 CDD:238020
I-set 4090..4181 CDD:254352
Ig 4108..4181 CDD:299845
FN3 4185..4271 CDD:238020
FN3 4285..4383 CDD:238020
Ig 4404..4480 CDD:299845
FN3 4484..4571 CDD:238020
FN3 4584..4677 CDD:238020
I-set 4685..4775 CDD:254352
Ig 4703..4775 CDD:299845
FN3 4779..4863 CDD:238020
FN3 4879..4970 CDD:238020
IG 4989..5069 CDD:214652
Ig 4996..5069 CDD:299845
FN3 5073..5166 CDD:238020
FN3 5175..5265 CDD:238020
I-set 5276..5366 CDD:254352 14/89 (16%)
Ig 5293..5366 CDD:299845 10/72 (14%)
FN3 5370..5462 CDD:238020 19/94 (20%)
FN3 5470..5561 CDD:238020 16/99 (16%)
Ig 5559..5654 CDD:299845 18/94 (19%)
I-set 5570..5660 CDD:254352 17/89 (19%)
FN3 5664..5755 CDD:238020 26/95 (27%)
FN3 5764..5853 CDD:238020 23/110 (21%)
I-set 5865..5954 CDD:254352 21/102 (21%)
Ig 5882..5954 CDD:299845 21/85 (25%)
FN3 5958..6049 CDD:238020 27/112 (24%)
FN3 6062..6153 CDD:238020 26/99 (26%)
I-set 6173..6255 CDD:254352 20/99 (20%)
Ig_Titin_like 6182..6255 CDD:143225 18/90 (20%)
FN3 6259..6350 CDD:238020 24/96 (25%)
FN3 6359..6451 CDD:238020 21/95 (22%)
FN3 6470..6552 CDD:238020 21/113 (19%)
I-set 6564..6650 CDD:254352 18/101 (18%)
Ig_Titin_like 6577..6650 CDD:143225 16/88 (18%)
FN3 6654..6745 CDD:238020 18/105 (17%)
FN3 6754..6840 CDD:238020 23/98 (23%)
I-set 6855..6946 CDD:254352 17/106 (16%)
Ig 6874..6946 CDD:299845 16/87 (18%)
FN3 6950..7042 CDD:238020 23/113 (20%)
FN3 7050..7139 CDD:238020 22/112 (20%)
FN3 7151..7237 CDD:238020 21/98 (21%)
I-set 7254..7334 CDD:254352 8/26 (31%)
Ig 7272..7339 CDD:143165 3/6 (50%)
IG_like 7354..7440 CDD:214653
Ig 7366..7440 CDD:299845
FN3 7444..7531 CDD:238020
FN3 7545..7637 CDD:238020
I-set 7648..7737 CDD:254352
Ig 7665..7734 CDD:143165
Ig 7760..7833 CDD:299845
FN3 7837..7927 CDD:238020
STKc_Twitchin_like 7986..8244 CDD:271016
S_TKc 7989..8244 CDD:214567
Ig 8311..8394 CDD:299845
I-set 8312..8401 CDD:254352
I-set 8437..8525 CDD:254352
Ig 8455..8519 CDD:143165
I-set 8632..8721 CDD:254352
IGc2 8646..8711 CDD:197706
I-set 8740..8831 CDD:254352
Ig 8757..8826 CDD:143165
I-set 8839..8922 CDD:254352
Ig 8845..>8909 CDD:299845
LarNP_001260594.1 Ig 35..129 CDD:299845 32/170 (19%)
I-set 36..129 CDD:254352 31/169 (18%)
IG_like 146..227 CDD:214653 19/111 (17%)
Ig 159..228 CDD:299845 16/99 (16%)
I-set 234..318 CDD:254352 18/92 (20%)
Ig3_RPTP_IIa_LAR_like 249..317 CDD:143216 15/76 (20%)
fn3 324..404 CDD:278470 23/84 (27%)
FN3 423..514 CDD:238020 20/99 (20%)
FN3 520..610 CDD:238020 27/128 (21%)
FN3 616..707 CDD:238020 25/108 (23%)
FN3 712..810 CDD:238020 26/101 (26%)
FN3 832..907 CDD:238020 17/83 (20%)
FN3 914..1005 CDD:238020 23/98 (23%)
FN3 1012..1101 CDD:238020 22/98 (22%)
fn3 1106..1198 CDD:278470 22/118 (19%)
PTPc 1476..1731 CDD:214550 56/288 (19%)
PTPc 1503..1731 CDD:238006 52/261 (20%)
PTPc 1763..2022 CDD:214550 46/229 (20%)
PTPc 1791..2022 CDD:238006 40/201 (20%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.910

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