DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment bt and lama5

DIOPT Version :9

Sequence 1:NP_001162825.1 Gene:bt / 43814 FlyBaseID:FBgn0005666 Length:8933 Species:Drosophila melanogaster
Sequence 2:XP_009294934.1 Gene:lama5 / 321243 ZFINID:ZDB-GENE-030131-9823 Length:3665 Species:Danio rerio


Alignment Length:1704 Identity:322/1704 - (18%)
Similarity:593/1704 - (34%) Gaps:524/1704 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   881 RINIEQISEGDPKEELTVKEEILDK-RDTQEVKESSVELQDSAGHEVPEPKKATSDSKLDQSNQK 944
            ::|....|..|....:|.....||| |:...|.|..:|:.||...::  .|||:...|...:.:.
Zfish  2183 QLNRLNASIADIANAITNYNSTLDKSRNRASVLEGELEIIDSDIKDL--EKKASVTQKKKDALED 2245

  Fly   945 NLDKKH-------------------------KTDQSESKTNKNVSLAEPI--------------- 969
            |::..|                         :|.|:|::......||..|               
Zfish  2246 NINSTHTRAQELFGFIKGIMRDVKDIIQQVNRTAQNETQVMDEKDLARKIAEVESMLRDMRFRGF 2310

  Fly   970 --KSNKQESEEQQATEQIGLKKVDRKASIVSVK----EEISSDVRRKSTIKAKEEITVDDKKASS 1028
              :.||.::|..||.     ..|||..:.::.:    |.::.::|.|  :|...|..:|.:.|.:
Zfish  2311 DYQKNKAKNELDQAN-----NLVDRVINEIANRTWNNEAVAENIRNK--LKQFNEQLMDLRDAMN 2368

  Fly  1029 ---RRSSLAVEESNTESRRSSIIDKKPLEQVDNKPIDANKNPQPLKEEIPRLKPAEKRRTSKVIE 1090
               ..::..||.:|        |::|.||.:..|   .|...:..||.:.:|:.||.        
Zfish  2369 EAVNNTAQTVEANN--------INQKHLEDLQKK---VNSLHEKYKEVVSQLQMAED-------- 2414

  Fly  1091 EPKPDEGLPKLRKASIAQVKEEAKPAAPKLKAKAKAKPKYEEL-PEIPDYERPQLEKYEKSDFTP 1154
                          .:.||.:       .|.....:|..||.| .::....:|..||.:|  :.|
Zfish  2415 --------------DVTQVND-------LLSMLQDSKEDYEHLAAQLDGARQPLAEKVQK--YAP 2456

  Fly  1155 SDFARDLEIPNKMEKPIIDSGKKEPAVLAQKNGIPKKTDIIEQYADEPKGLKVGKGKLPDEGDGR 1219
            :        .||:  |::::.:|.             .:::||.|:....|        ..|..:
Zfish  2457 A--------ANKI--PLVEAAEKH-------------AEMLEQLANNLSSL--------ISGSNQ 2490

  Fly  1220 DGAVLKPV------------IIEPEKEILDLGNKKNNQHADKPTVLDIIKQRRRSSIRNLMTKEP 1272
            |..:.:.:            ::|.|...|     |.|:.|.                   |..|.
Zfish  2491 DNFIQRALNASRAYTNIINSVLEAETTAL-----KANETAS-------------------MALEN 2531

  Fly  1273 IQNESFLGVVLKPVIKDTREQAA--PQQAIQLTKANATEQFSPTKAVKAQV---------ADLKK 1326
            |::            ||...|||  ..|:.:|.| :|.|..:.::::|.:|         |:.||
Zfish  2532 IRD------------KDLPAQAAALKNQSTELLK-SAEELNNSSQSLKPRVDTIKMSLLDAEKKK 2583

  Fly  1327 PETLATLEDNYERPVLEKYDPF-SIDKTKSEKSTPSIITPDIRGPEVKLPVQETKEEKQKVPKMQ 1390
            .:.|..|:|...:..:.:.|.. ||...||.....:....::.|  |..|:|:..||.||.....
Zfish  2584 EKMLQDLKDIQNKLNVSRDDIVNSISAAKSAVEQANNTVANVSG--VLAPIQKQLEEWQKQYGDS 2646

  Fly  1391 PPAPGDPPKIEVIREKRPSLAPEPPSRRGSLIPPADTGRRPSLIINDEKKLRPGEVMDTRLLRPG 1455
            .....|..|  .:.:...|:|             |.:...|.||    |||   :.:.....:|.
Zfish  2647 NATSEDINK--ALNDANTSVA-------------ALSDTLPKLI----KKL---DRLHNTTFQPS 2689

  Fly  1456 EVGEGQRRRPSIDVRRPSVQDLEDLINKPSTPLRDVGDGG-----PPSIVDVQESYSVVEDSTAY 1515
            .:.:      ||...|..::...:..||.|..::..|..|     |.::.|: .:||.::   .|
Zfish  2690 NISD------SIQRIRQLIEQARNAANKVSVSMQFNGKSGVQVRTPSNVADL-AAYSSLQ---MY 2744

  Fly  1516 LTVGVEGSPAPTFK-------------FYKG--------VSEILEGGRFKFLTDGQTNTITLCMR 1559
            :.:     |:||.|             .|.|        ::..|.|.:.::..:...:::.:.|.
Zfish  2745 IKL-----PSPTIKKKRQTEATNPQFVLYLGNRDSSKEYMAVTLNGKKLRWHFNVGGSSVDVLMD 2804

  Fly  1560 KCKPNDESKYKIVVSNI-HGEDSAEMQLYVSDSSGMDFRAMLKKRRYQKWDK-------DEQDPN 1616
            :...||.....|:...: :|:        :|.::..|...::|:....|..|       :|....
Zfish  2805 EDVKNDFFNKLILERTLQYGQ--------MSMTTDQDENNIIKRIMEAKGQKGLLNLPAEETVFY 2861

  Fly  1617 WGDLKETEKPLPALKKVERKVESF------LS---PLIDQFAKEGK-DKKVVFEARFS--KPNCK 1669
            .|....|..| |....:...::.|      ||   .||..:..|.. |.....:|..|  :|...
Zfish  2862 VGGFPSTFSP-PGTLNLSSPLDFFKGYVELLSINEELISLYNFEQTFDMNTTTDAPCSRKRPANT 2925

  Fly  1670 PKWLFRKDEV-FTGSKFKFKQENDTYQLIITTPKVEDTGKYTIEI---GGVSSTAFLNVEEADPT 1730
            |:|:.  |.| |.|:.:        .:::..|.|.:.|...||.:   .|:    .|:.:..|..
Zfish  2926 PEWVV--DGVYFDGTGY--------VEVLFETQKGDRTFDQTIRLISQNGI----LLSFQREDKY 2976

  Fly  1731 YTFTKPLKKKLEGFTQHETTLECSVSSSMANVHWFKNNTKLESDDPRYL-ISKDINGNLKLIIKD 1794
            .|..     .|:||.:....:|.|:.....      |.||:.:.|.:.| :...:| |:|:::: 
Zfish  2977 VTIA-----VLDGFLRVFYNVEGSLMPGPG------NPTKISNADKKTLQVILQLN-NMKMLVR- 3028

  Fly  1795 SVLDDAGLY-----------RCQLDKQPDKTECN-LKVTEYPYKFV----KVLKSQ------QCI 1837
              ||...||           |..|...|:....| ||.....:..:    :::||.      :.:
Zfish  3029 --LDRETLYTLYSEELNFTGRYFLGGVPEAEMPNDLKSIYLKHGSIRGCFRIIKSMGSFVQIKTM 3091

  Fly  1838 EKDTVTLACEIDDAMGEVQWLRNGEEIKPDKRIQIVKDGRKRKLVIKDCKVTDAGQFKCTTNADT 1902
            :...::..|. ||.:...:....||..                |.:|...|..|..|.......|
Zfish  3092 KSSGISFGCP-DDLLFTREAHFTGEGY----------------LGLKMDYVDLANSFYGGIGFRT 3139

  Fly  1903 TESE-IIINYQNRFNKKLKDTEAVEREKLILDIELQDQTAPCDWKFNGEPIVPSESIEIK----- 1961
            .:.. ::..:||:.|..          |::||              ||..:|.::..|:|     
Zfish  3140 DQQNGLMFYHQNKDNVC----------KVMLD--------------NGHVLVSTDRKEVKSQKTY 3180

  Fly  1962 NMGGGKHQLIFS-----SLDMSNEGEITCESGQLSSKCKLSIRKG----ESRPNIDCPDKFSGPI 2017
            |.....:..::.     |:.:.:..|.:.|:|.:::: :.::::|    ...|..:.|...:|.|
Zfish  3181 NDDNNHYVAVYRDQNVLSIYIDDVLESSGETGNVTTR-RNALQEGFTYVGGTPESNGPTNLTGCI 3244

  Fly  2018 SAPVLLEVPFKVSGTKQTPVEAKLFKDGKPLPVKDVEVAVTDDKVTFKIKKPSRDLSGPYQI--- 2079
            |       .|.:.            :..:|..|:|::.|:...|.||...    |.|.|.|:   
Zfish  3245 S-------NFFIK------------RANEPQIVEDLKTALEGRKYTFTCP----DASAPLQMLNS 3286

  Fly  2080 ---KISNGQGEDTKDVQIICQDVPQPPQDVDITDVYQTSCVVSFNPPSDDGGTPITKYVIERQDL 2141
               |..|..|.....   :.:|..|....|...|.:..|           |.|            
Zfish  3287 PRPKKQNAPGNSRSR---MARDSCQGDTSVQEVDAHHFS-----------GST------------ 3325

  Fly  2142 SKKHG---WESVAEVLPSEPCLKKIDDLIPKKQYRFRIRAVNAIGQSDPATFKNTILAKDPWDEP 2203
               |.   ::|:.:.....|            .:...:|..::.|          ::......:.
Zfish  3326 ---HSHMRFDSLPQAFSKAP------------HFSISVRVNSSSG----------LIFHVAGGKG 3365

  Fly  2204 GKPKAVDLTDWDKDHADLKWEAPETDGGDPITAYIVEYKEKFSND-W-VSGKEVDGDARTATVDG 2266
            .:..|:.::|   .|..|.     .:||...|:  :..|:::|:. | ....:|:||..:.||||
Zfish  3366 QRMMALSVSD---GHLTLL-----VNGGKRKTS--IRSKKRYSDGLWHTVFVKVEGDRGSLTVDG 3420

  Fly  2267 LKEGQQYEFRVRAVNR---AGP----GEPSDKTKSIIAKCRFVKPFIVGE-GLKNVTVKKGQTIR 2323
            :....:   ||.|..:   |.|    |.|.|.:.::......|:...:.| .|::.:|..|.|..
Zfish  3421 IDTQNK---RVSAGGKSMFAAPLYIGGLPVDHSAAMAGFVGCVRDLKLNEVSLQSPSVSVGVTPC 3482

  Fly  2324 FDIKYDGEP-EPAATWVKGTDNLKFDNQRICLDQLERNSSITIKKSVRKDTGKYKLVLSNSSGTI 2387
            :.     :| :|.|.:......:..|...:....||      |:..||.|:|...|:.:.:..|.
Zfish  3483 YQ-----QPLQPGAHFSSRGGFMTIDESLVLGQDLE------IQLEVRLDSGSGLLLHTGAKKTH 3536

  Fly  2388 E-----SEAQVVVL 2396
            :     .:.||.||
Zfish  3537 QLSVYLEQGQVTVL 3550

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
btNP_001162825.1 I-set 9..101 CDD:254352
Ig 26..100 CDD:143165
I-set 119..210 CDD:254352
Ig 136..209 CDD:143165
I-set 228..320 CDD:254352
IGc2 242..312 CDD:197706
I-set 335..425 CDD:254352
Ig 350..423 CDD:143165
Ig 436..530 CDD:299845
I-set 438..532 CDD:254352
I-set 545..636 CDD:254352
Ig 560..633 CDD:143165
Ig 657..731 CDD:143165
I-set 746..835 CDD:254352
Ig 1496..1586 CDD:299845 18/111 (16%)
IG_like 1503..1588 CDD:214653 16/106 (15%)
I-set 1639..1724 CDD:254352 23/100 (23%)
IG 1750..1821 CDD:214652 20/83 (24%)
IGc2 1750..1806 CDD:197706 15/67 (22%)
I-set 1826..1909 CDD:254352 13/93 (14%)
Ig 1831..1897 CDD:299845 12/71 (17%)
I-set 1914..1998 CDD:254352 14/93 (15%)
Ig 2020..2095 CDD:299845 15/80 (19%)
FN3 2100..2194 CDD:238020 11/96 (11%)
FN3 2203..2292 CDD:238020 25/97 (26%)
I-set 2311..2395 CDD:254352 19/89 (21%)
Ig 2321..2395 CDD:299845 16/79 (20%)
FN3 2399..2493 CDD:238020
FN3 2501..2590 CDD:238020
I-set 2602..2693 CDD:254352
Ig 2619..2693 CDD:299845
FN3 2697..2793 CDD:238020
FN3 2801..2893 CDD:238020
I-set 2902..2995 CDD:254352
Ig 2919..2993 CDD:299845
FN3 2999..3088 CDD:238020
FN3 3102..3191 CDD:238020
I-set 3208..3292 CDD:254352
Ig 3219..3292 CDD:299845
FN3 3296..3390 CDD:238020
FN3 3400..3489 CDD:238020
I-set 3494..3590 CDD:254352
Ig 3516..3590 CDD:299845
FN3 3594..3682 CDD:238020
FN3 3694..3781 CDD:238020
I-set 3795..3885 CDD:254352
Ig 3813..3885 CDD:299845
FN3 3889..3980 CDD:238020
FN3 3990..4082 CDD:238020
I-set 4090..4181 CDD:254352
Ig 4108..4181 CDD:299845
FN3 4185..4271 CDD:238020
FN3 4285..4383 CDD:238020
Ig 4404..4480 CDD:299845
FN3 4484..4571 CDD:238020
FN3 4584..4677 CDD:238020
I-set 4685..4775 CDD:254352
Ig 4703..4775 CDD:299845
FN3 4779..4863 CDD:238020
FN3 4879..4970 CDD:238020
IG 4989..5069 CDD:214652
Ig 4996..5069 CDD:299845
FN3 5073..5166 CDD:238020
FN3 5175..5265 CDD:238020
I-set 5276..5366 CDD:254352
Ig 5293..5366 CDD:299845
FN3 5370..5462 CDD:238020
FN3 5470..5561 CDD:238020
Ig 5559..5654 CDD:299845
I-set 5570..5660 CDD:254352
FN3 5664..5755 CDD:238020
FN3 5764..5853 CDD:238020
I-set 5865..5954 CDD:254352
Ig 5882..5954 CDD:299845
FN3 5958..6049 CDD:238020
FN3 6062..6153 CDD:238020
I-set 6173..6255 CDD:254352
Ig_Titin_like 6182..6255 CDD:143225
FN3 6259..6350 CDD:238020
FN3 6359..6451 CDD:238020
FN3 6470..6552 CDD:238020
I-set 6564..6650 CDD:254352
Ig_Titin_like 6577..6650 CDD:143225
FN3 6654..6745 CDD:238020
FN3 6754..6840 CDD:238020
I-set 6855..6946 CDD:254352
Ig 6874..6946 CDD:299845
FN3 6950..7042 CDD:238020
FN3 7050..7139 CDD:238020
FN3 7151..7237 CDD:238020
I-set 7254..7334 CDD:254352
Ig 7272..7339 CDD:143165
IG_like 7354..7440 CDD:214653
Ig 7366..7440 CDD:299845
FN3 7444..7531 CDD:238020
FN3 7545..7637 CDD:238020
I-set 7648..7737 CDD:254352
Ig 7665..7734 CDD:143165
Ig 7760..7833 CDD:299845
FN3 7837..7927 CDD:238020
STKc_Twitchin_like 7986..8244 CDD:271016
S_TKc 7989..8244 CDD:214567
Ig 8311..8394 CDD:299845
I-set 8312..8401 CDD:254352
I-set 8437..8525 CDD:254352
Ig 8455..8519 CDD:143165
I-set 8632..8721 CDD:254352
IGc2 8646..8711 CDD:197706
I-set 8740..8831 CDD:254352
Ig 8757..8826 CDD:143165
I-set 8839..8922 CDD:254352
Ig 8845..>8909 CDD:299845
lama5XP_009294934.1 Laminin_N 51..290 CDD:278484
EGF_Lam 291..339 CDD:238012
EGF_Lam 350..413 CDD:238012
EGF_Lam 421..463 CDD:214543
EGF_Lam 482..529 CDD:214543
Laminin_EGF 529..577 CDD:278482
Laminin_EGF 575..622 CDD:278482
Laminin_EGF 620..667 CDD:278482
EGF_Lam 664..711 CDD:238012
Laminin_EGF 713..759 CDD:278482
Laminin_EGF 762..812 CDD:278482
EGF_Lam 815..858 CDD:238012
Laminin_EGF 1421..1469 CDD:278482
Laminin_EGF 1511..1561 CDD:278482
Laminin_EGF 1559..1607 CDD:278482
Laminin_B 1672..1796 CDD:278481
EGF_Lam 1842..1881 CDD:238012
Laminin_EGF 1894..1947 CDD:278482
EGF_Lam 1949..2002 CDD:238012
Laminin_EGF 2004..2048 CDD:278482
Laminin_EGF 2051..2099 CDD:278482
Laminin_EGF 2099..>2128 CDD:278482
mycoplas_twoTM 2158..>2351 CDD:275320 34/174 (20%)
Laminin_I 2171..2429 CDD:283627 57/294 (19%)
COG1340 2319..2558 CDD:224259 67/355 (19%)
BAR 2383..2637 CDD:299863 69/357 (19%)
Laminin_II 2611..2741 CDD:283628 34/160 (21%)
LamG 2757..2896 CDD:214598 22/147 (15%)
LamG 2932..3075 CDD:238058 35/169 (21%)
LamG 3110..3249 CDD:238058 31/186 (17%)
LamG 3320..3466 CDD:238058 34/206 (17%)
LamG 3490..3642 CDD:238058 15/67 (22%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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