DRSC/TRiP Functional Genomics Resources

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Protein Alignment bt and Siglec1

DIOPT Version :9

Sequence 1:NP_001162825.1 Gene:bt / 43814 FlyBaseID:FBgn0005666 Length:8933 Species:Drosophila melanogaster
Sequence 2:XP_017447235.1 Gene:Siglec1 / 311426 RGDID:1311953 Length:1708 Species:Rattus norvegicus


Alignment Length:2205 Identity:381/2205 - (17%)
Similarity:637/2205 - (28%) Gaps:878/2205 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly  6917 KSAKRDETGSYTITL---TNNKGSDTASCHVTVVDRPLPP---------QG-PLNAYDITPDTCT 6968
            |..|.:::|:|....   ..|:.||.....|||...|.||         :| .:|....||..|.
  Rat   103 KDLKLEDSGTYNFRFEISDGNRWSDVRGTTVTVTKDPSPPTITIPHELREGVEVNVNCSTPYLCL 167

  Fly  6969 LAWKTPLDDGGSPITNYVVEKLDNSGSWVKISSFVRNTHYDVMGLEPHYKYNFRVRAENQYGLSD 7033
            ...:..|...|...|..|:.                               ||:           
  Rat   168 QEKQVSLHWQGQDPTRSVIS-------------------------------NFQ----------- 190

  Fly  7034 PLDIIEPIVAKHQFTVPDEPGQPKVIDWDSGNVTLIWTRPLSDGGSRIQGYQIEYRDILNDSSWN 7098
               .:||....||.|:...|      .|.....||                              
  Rat   191 ---SLEPTGVYHQTTLHMAP------SWQDHRRTL------------------------------ 216

  Fly  7099 AYDYIIKDTKYQLYNLINGSEYEFRIKAKNAAGLSKPSSPSLRFKLKGKFTVPSPPGAPQVT--- 7160
                     :.||....:.|:.|..::.::|     |....:.....|:..:|    ...||   
  Rat   217 ---------RCQLSLATHSSQKEVYLQVQHA-----PKGVEILLSSSGRNILP----GNLVTLTC 263

  Fly  7161 RVGKNY-----VDLKWEKPLRDGGSRIT--GYIIERRDIGGAVWVKCNDYNVLDTEYTVMNLIEM 7218
            ||..:|     ||  |.|    .|..:|  |::::   :..|.|   ||..|    ||..     
  Rat   264 RVNSSYPAVSSVD--WVK----DGVNLTAKGHVLQ---LSSATW---NDSGV----YTCQ----- 307

  Fly  7219 GDYEFRVFAVNSAGRSEPSLCTMPIKVCEVLGGKKPDWITRLQDKVAPFG-----KDYTLQCAAS 7278
                    |.|:.|    ||.:.|:.:          .:...:.|:.|.|     :..||.|:..
  Rat   308 --------ATNNVG----SLASPPLSL----------HVFMAEVKINPAGPILENETVTLLCSTP 350

  Fly  7279 GKPSPTAR--WLRNGKEIQMNGGRMTCDSKDGVFRLHISNVQTGDDGDYTCEAMNSLGFVNTSGY 7341
            .:.....|  |.:|  .|.:......        .||:..|...|.|.|.||..|:.| ...||.
  Rat   351 KEAPQELRYSWYKN--NILLEDAHAP--------TLHLPAVTRADTGFYFCEVQNTQG-SERSGP 404

  Fly  7342 LK--IGSPPIINRCPSELKLPEGDNSKIKIFYSG--DQPL-TVILKKNNEVICDS---ND-DTHV 7397
            :.  :..||:   .|......|.....:.||:..  .:|| ||:|......:..|   || :...
  Rat   405 VSVVVRYPPL---TPDLTTFLETQAGLVGIFHCSVISEPLATVVLSHGGLTLASSSGENDFNPRF 466

  Fly  7398 KVNIFDDYVAIYIRNIVKSDGGPYQIEFTNESGSATG--EFYVHITGMPSAPTGPM--------- 7451
            .::...:.|.:.||::..:|.|.|....||..|.:..  :|:.::..:..:|:..:         
  Rat   467 SISSAPNSVRLEIRDLQPADSGEYTCSATNSLGKSMSSLDFHANVARLLISPSKEVVEGQAVTLS 531

  Fly  7452 ---GIS---------YIN-------KNSCMLNWRPPSYDGGLKVSHYVIERKDVSSPHW------ 7491
               |::         |:|       .:|..|.....|.|.|   |:|...|   :.||.      
  Rat   532 CRSGLNPAPDTRFSWYLNGALLLEGSSSNFLLPAASSTDSG---SYYCRAR---AGPHTSGPSLP 590

  Fly  7492 --ITVSSTCKDTAFNVQGLIENQEYIFRVMAVNENGMGPPLEGLNPIRAKDPIDPPSP-----PG 7549
              :||....:...|..:            :.::.:|.|....|:  :..:...|||:.     .|
  Rat   591 TVLTVFYPPRKLTFTAR------------LDLDTSGDGDGRRGI--LLCQVDSDPPAQLQLLHKG 641

  Fly  7550 SPQITEI---------------GGDFVHLEWEKP--ESDGGAHIQGYWIDKREVGSNTWQRVNAT 7597
            ....|.:               ..:.:.:|.:||  |.:|                       ..
  Rat   642 HVVATSLPSMCGSCSRRMKVSRASNSLQVEIQKPVLEDEG-----------------------MY 683

  Fly  7598 ICAANQINCINLIEGRQYEFRIFAQNVAGLSTESSASQAVKIIDPQAASPPLIVKPLRDANCIQN 7662
            :|.|:                    |..|.|:.|::..|...:        :::.|  ....::.
  Rat   684 LCEAS--------------------NTLGNSSVSASFNAKATV--------VVITP--SDTLLEG 718

  Fly  7663 HNAQFTCTIN---GVPKPTISWYKGAREISNGARYHMYSEGDNHFLNINDVFGEDADEYVCRAVN 7724
            ..|..||.:.   .|.....||::      ||.   ::::|....:.:..:...||..|.||.:.
  Rat   719 TEASLTCNVTQEVAVSPANFSWFR------NGV---LWTQGPLETVRLQPLARTDAAVYACRLLT 774

  Fly  7725 KAGAK-STRATLAIMTAPKLNVPPRFRDTAYFDKGENVVIKIPFTGFPKPRIHWVRDGENI---- 7784
            ..||: |....|::..||.   ||:........:|...|.......:|...:...| ||.:    
  Rat   775 DDGAQLSAPVVLSVQYAPD---PPKLSALLDVGQGHMAVFICTVDSYPLAHLSLFR-GERLLATS 835

  Fly  7785 -----ESGGHYTVEVKERHAVLIIRDGSHLDSGPYRITAENELGSDTAII-------QVQISDRP 7837
                 .|.|....:.......|.:|:....|||.|...|.|.|||..:.:       .||:|..|
  Rat   836 LEPQRLSHGRIQAKATANSLQLEVRELGLEDSGNYHCEATNVLGSANSSLFFQVRGAWVQVSPSP 900

  Fly  7838 DPPRFPLIESIGTESLSLSWKAPVWDGCSDITNYYVERREHPLSSWIRVGNTRFTSMAVSGLTPG 7902
            :     |.|.   :::.||.:.|                                    :|:..|
  Rat   901 E-----LREG---QAVVLSCQVP------------------------------------TGVPEG 921

  Fly  7903 KEYDFRIFADNVYGRSDASDTSTLIKTKESVKKKPIERKWEIDANGRKLRGKADGPVKDYDSYVF 7967
            ..|  |.|.|   ||.....||::::.                                      
  Rat   922 TSY--RWFQD---GRPLQESTSSILRI-------------------------------------- 943

  Fly  7968 DIYSKFVPQPVEISQQSVYDRYDILEEIGTGAFGVVHRCRERSTGNIFAAKFIPVSHSVEKDLIR 8032
                    ..:.:.|...|                  .|:.::.....|:...|||         
  Rat   944 --------AAISLRQAGAY------------------HCQAQAPDTAAASLAAPVS--------- 973

  Fly  8033 REIDIMNQLHHQKLINLHDAFEDDDEMILILEFLSGGELFERITAEGYVMTEAEVINYMRQICEG 8097
                            ||.::  ....:.:...||        |..|         .|...:|..
  Rat   974 ----------------LHVSY--TPRHVTLSALLS--------TGPG---------RYGHLVCSA 1003

  Fly  8098 -------IRHMHEQNIIHLDIK-PENIMCQTRSSTNVKLIDFGLATRLDPNEVVKITTGTAEFAA 8154
                   :|..|:..::...:: ||.:     :|:|.:     |...:..||:      ..|...
  Rat  1004 QSDPPALLRLFHQNRLVASTLQGPEEL-----ASSNPR-----LHVAVSSNEL------RLEIQF 1052

  Fly  8155 PEIVNREPVGFYTDMWATGVLSYVLLSGLSPFAGDNDVQTLKNVKACDWDFDVESFKYISEEAKD 8219
            .|:   |..|.|| ..||..|      |.:....|.|.|.   |:...|                
  Rat  1053 TEL---EDGGTYT-CEATNTL------GQASATADFDAQA---VRVAVW---------------- 1088

  Fly  8220 FIRKLLVRNKEKRMTAHECLLHPWLTGDHSAMKQEINRDRYLAYREKLRRKYEDFERFLLPIGRL 8284
                                                                             
  Rat  1089 ----------------------------------------------------------------- 1088

  Fly  8285 SEYSSLRKLLMEKYKIHDAVFDRRQAAPRFVIRPSSQFCYEGQSVKFYCRCIAIATPTLTWSHNN 8349
                                       |...::       |||.|...|         |.||.:.
  Rat  1089 ---------------------------PNATVQ-------EGQQVNLSC---------LAWSTHQ 1110

  Fly  8350 IELRQSVKFMKRYVGDDYYFIINRVKL-----DDRGEYI--IRAENHYGSREEVVFLNVQPLPKE 8407
            ..|..:     .|.|......:..:.|     .|...|.  :....|.......|.|:|...|: 
  Rat  1111 DSLSYT-----WYKGGQQLLGVRSISLPSVTVSDATSYRCGVGLPGHTPHLSRPVTLDVLYAPR- 1169

  Fly  8408 QPRYRTESTPVRRREPLPYTFWQEESETAPSFTFLLRPRVMQARDTCKLLCCLSGKPVPNVRWYK 8472
                                        :...|:||.   .|.|....:||.:..:|...:....
  Rat  1170 ----------------------------SLQLTYLLE---SQGRRLALVLCTVDSRPPAQLTLSH 1203

  Fly  8473 DGRELSKYEYAMTHSDGVVTMEIIDCKPSDSGKYSCKATNCHGTDETDCVVIVEGEWVTPEQAQL 8537
            .|:.|:....|..  ...:.:|:.|.||||.|.|||.|.:..|...|...:.:||          
  Rat  1204 GGQLLASSTEASV--PNTLRLELQDPKPSDEGLYSCSAQSPLGKVNTSLALRLEG---------- 1256

  Fly  8538 AHNFLYSGDRKYIEQPIKPAPLPIVTSRQYTSSSVQNTSEPQGDKVNVSNSNSSGISNKKKYA-- 8600
                                    |..|...|::|     |:|:.|.|:..:.:.:| ...||  
  Rat  1257 ------------------------VRVRMNPSATV-----PEGEPVTVTCEDPAALS-PALYAWF 1291

  Fly  8601 ----------SNSLQAP------------------GSPSRSRSATKELILPPDDSLMCKPEFTKP 8637
                      ::|||.|                  |:.| ||.|:.:::..|.|:::.....::.
  Rat  1292 HNGHWLQEGPASSLQFPVTTQAHAGAYFCQVHDTQGTRS-SRPASLQILYAPRDAVLSSFRDSRT 1355

  Fly  8638 LHDLTIHDGEQLILTCYVKGDPEPQISWSKNGKSLSSS--------DILDLRYKNGIATLTINEV 8694
            .|        .:::.|.|..:|..::..|:|.|.|::|        .|..::.......|.:.:.
  Rat  1356 RH--------MVVIQCTVDSEPPAELVLSRNSKVLAASRELHSSAPGISHVQAARNALRLQVQDT 1412

  Fly  8695 FPEDEGVITCTATNSVGAVETKCKLTIQPLDKNINKRKVNAGDNAPKIVSHLESRFVRDGDAVNL 8759
            ...|.....|||.|::|::.|..|| ::..|.::.   ...|.:.|            :|.|:||
  Rat  1413 TFGDGNTYVCTARNTLGSISTTHKL-LRETDIHVT---AEPGLDVP------------EGTALNL 1461

  Fly  8760 ACRI------IGAQHFDVVWLHNNKEIKPSKDFQYTNEANIYRLQIAEIFPEDGGTYTCEAFNDI 8818
            :|.:      :|...|...|   |:.:        .:.|.:..|....:.....|:|.|.|    
  Rat  1462 SCHLPGGSQPVGNSSFTWFW---NRHL--------LHSAPVPTLSFTPVVRAQAGSYHCRA---- 1511

  Fly  8819 GESFSTCTINVTVPGDETKQPSFV------KFPTSVSVLEGEG---TTFECEIDSELLNLVWLKD 8874
              ..||        |..|..|..:      |.||....:|.:|   ...:|.:|||.|..:.|:.
  Rat  1512 --ELST--------GVTTSPPVMLRVLYPPKTPTLTVFVEPQGGHQGILDCRVDSEPLASLTLQL 1566

  Fly  8875 GKPI--------DETLPRYSFTKDGHRYSFAVAKCNMDDVGQYQAKAVS--GKAESICAF 8924
            |..:        ..|.|....|...:.....:.:...::.|:|...|.:  |.|.:...|
  Rat  1567 GSQLVASNQPHSAPTQPHIRVTAPPNALRLDIEELGPNNQGEYVCTASNALGSASASAYF 1626

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
btNP_001162825.1 I-set 9..101 CDD:254352
Ig 26..100 CDD:143165
I-set 119..210 CDD:254352
Ig 136..209 CDD:143165
I-set 228..320 CDD:254352
IGc2 242..312 CDD:197706
I-set 335..425 CDD:254352
Ig 350..423 CDD:143165
Ig 436..530 CDD:299845
I-set 438..532 CDD:254352
I-set 545..636 CDD:254352
Ig 560..633 CDD:143165
Ig 657..731 CDD:143165
I-set 746..835 CDD:254352
Ig 1496..1586 CDD:299845
IG_like 1503..1588 CDD:214653
I-set 1639..1724 CDD:254352
IG 1750..1821 CDD:214652
IGc2 1750..1806 CDD:197706
I-set 1826..1909 CDD:254352
Ig 1831..1897 CDD:299845
I-set 1914..1998 CDD:254352
Ig 2020..2095 CDD:299845
FN3 2100..2194 CDD:238020
FN3 2203..2292 CDD:238020
I-set 2311..2395 CDD:254352
Ig 2321..2395 CDD:299845
FN3 2399..2493 CDD:238020
FN3 2501..2590 CDD:238020
I-set 2602..2693 CDD:254352
Ig 2619..2693 CDD:299845
FN3 2697..2793 CDD:238020
FN3 2801..2893 CDD:238020
I-set 2902..2995 CDD:254352
Ig 2919..2993 CDD:299845
FN3 2999..3088 CDD:238020
FN3 3102..3191 CDD:238020
I-set 3208..3292 CDD:254352
Ig 3219..3292 CDD:299845
FN3 3296..3390 CDD:238020
FN3 3400..3489 CDD:238020
I-set 3494..3590 CDD:254352
Ig 3516..3590 CDD:299845
FN3 3594..3682 CDD:238020
FN3 3694..3781 CDD:238020
I-set 3795..3885 CDD:254352
Ig 3813..3885 CDD:299845
FN3 3889..3980 CDD:238020
FN3 3990..4082 CDD:238020
I-set 4090..4181 CDD:254352
Ig 4108..4181 CDD:299845
FN3 4185..4271 CDD:238020
FN3 4285..4383 CDD:238020
Ig 4404..4480 CDD:299845
FN3 4484..4571 CDD:238020
FN3 4584..4677 CDD:238020
I-set 4685..4775 CDD:254352
Ig 4703..4775 CDD:299845
FN3 4779..4863 CDD:238020
FN3 4879..4970 CDD:238020
IG 4989..5069 CDD:214652
Ig 4996..5069 CDD:299845
FN3 5073..5166 CDD:238020
FN3 5175..5265 CDD:238020
I-set 5276..5366 CDD:254352
Ig 5293..5366 CDD:299845
FN3 5370..5462 CDD:238020
FN3 5470..5561 CDD:238020
Ig 5559..5654 CDD:299845
I-set 5570..5660 CDD:254352
FN3 5664..5755 CDD:238020
FN3 5764..5853 CDD:238020
I-set 5865..5954 CDD:254352
Ig 5882..5954 CDD:299845
FN3 5958..6049 CDD:238020
FN3 6062..6153 CDD:238020
I-set 6173..6255 CDD:254352
Ig_Titin_like 6182..6255 CDD:143225
FN3 6259..6350 CDD:238020
FN3 6359..6451 CDD:238020
FN3 6470..6552 CDD:238020
I-set 6564..6650 CDD:254352
Ig_Titin_like 6577..6650 CDD:143225
FN3 6654..6745 CDD:238020
FN3 6754..6840 CDD:238020
I-set 6855..6946 CDD:254352 8/31 (26%)
Ig 6874..6946 CDD:299845 8/31 (26%)
FN3 6950..7042 CDD:238020 16/101 (16%)
FN3 7050..7139 CDD:238020 10/88 (11%)
FN3 7151..7237 CDD:238020 23/95 (24%)
I-set 7254..7334 CDD:254352 19/86 (22%)
Ig 7272..7339 CDD:143165 17/68 (25%)
IG_like 7354..7440 CDD:214653 22/94 (23%)
Ig 7366..7440 CDD:299845 20/82 (24%)
FN3 7444..7531 CDD:238020 19/122 (16%)
FN3 7545..7637 CDD:238020 14/113 (12%)
I-set 7648..7737 CDD:254352 19/92 (21%)
Ig 7665..7734 CDD:143165 17/72 (24%)
Ig 7760..7833 CDD:299845 19/88 (22%)
FN3 7837..7927 CDD:238020 16/89 (18%)
STKc_Twitchin_like 7986..8244 CDD:271016 38/265 (14%)
S_TKc 7989..8244 CDD:214567 37/262 (14%)
Ig 8311..8394 CDD:299845 16/89 (18%)
I-set 8312..8401 CDD:254352 18/95 (19%)
I-set 8437..8525 CDD:254352 24/87 (28%)
Ig 8455..8519 CDD:143165 18/63 (29%)
I-set 8632..8721 CDD:254352 20/96 (21%)
IGc2 8646..8711 CDD:197706 15/72 (21%)
I-set 8740..8831 CDD:254352 18/96 (19%)
Ig 8757..8826 CDD:143165 15/74 (20%)
I-set 8839..8922 CDD:254352 21/101 (21%)
Ig 8845..>8909 CDD:299845 15/74 (20%)
Siglec1XP_017447235.1 None
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4475
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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